data_8WU1 # _model_server_result.job_id e-Wo83lGmnnMx5-tJyjyyA _model_server_result.datetime_utc '2024-11-22 13:02:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wu1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 8WU1 # _exptl.entry_id 8WU1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 397.443 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl N-{1-[(4-fluorophenyl)methyl]-1H-indazole-3-carbonyl}-3-methyl-L-valinate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WU1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WU1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 25 H CYS 25 1_555 B SG CYS 99 H CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 C SG CYS 24 L CYS 24 1_555 C SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 D SG CYS 257 R CYS 257 1_555 D SG CYS 264 R CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 D C GLU 428 R GLU 428 1_555 D N SEP 429 R SEP 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 D C SEP 429 R SEP 429 1_555 D N CYS 430 R CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 D C CYS 430 R CYS 430 1_555 D N TPO 431 R TPO 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 D C TPO 431 R TPO 431 1_555 D N TPO 432 R TPO 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 D C TPO 432 R TPO 432 1_555 D N ALA 433 R ALA 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 D C ALA 433 R ALA 433 1_555 D N SEP 434 R SEP 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 D C SEP 434 R SEP 434 1_555 D N SEP 435 R SEP 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 D C SEP 435 R SEP 435 1_555 D N SEP 436 R SEP 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 D C SEP 436 R SEP 436 1_555 D N LEU 437 R LEU 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C22 H24 F N3 O3' _chem_comp.formula_weight 397.443 _chem_comp.id KCA _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl N-{1-[(4-fluorophenyl)methyl]-1H-indazole-3-carbonyl}-3-methyl-L-valinate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBB CBA KCA doub 171 n y CBB CBC KCA sing 172 n y CBA CAZ KCA sing 173 n y CBC CAX KCA doub 174 n y CAZ CAY KCA doub 175 n y CAX CAY KCA sing 176 n y CAX NAO KCA sing 177 n y CAY CAM KCA sing 178 n y NAO CAP KCA sing 179 n n NAO NAN KCA sing 180 n y CAP CAQ KCA sing 181 n n CAR CAQ KCA doub 182 n y CAR CAS KCA sing 183 n y CAM NAN KCA doub 184 n y CAM CAB KCA sing 185 n n CAQ CAW KCA sing 186 n y OAA CAB KCA doub 187 n n CAS CAT KCA doub 188 n y CAW CAV KCA doub 189 n y CAB N KCA sing 190 n n CAT CAV KCA sing 191 n y CAT FAU KCA sing 192 n n N CA KCA sing 193 n n CA C KCA sing 194 n n CA CB KCA sing 195 n n O C KCA doub 196 n n C OAF KCA sing 197 n n OAF CAG KCA sing 198 n n CG2 CB KCA sing 199 n n CB CAL KCA sing 200 n n CB CG1 KCA sing 201 n n N H1 KCA sing 202 n n CA H2 KCA sing 203 n n CG1 H3 KCA sing 204 n n CG1 H4 KCA sing 205 n n CG1 H5 KCA sing 206 n n CG2 H6 KCA sing 207 n n CG2 H7 KCA sing 208 n n CG2 H8 KCA sing 209 n n CAG H9 KCA sing 210 n n CAG H10 KCA sing 211 n n CAG H11 KCA sing 212 n n CAL H12 KCA sing 213 n n CAL H13 KCA sing 214 n n CAL H14 KCA sing 215 n n CAP H15 KCA sing 216 n n CAP H16 KCA sing 217 n n CAR H17 KCA sing 218 n n CAS H18 KCA sing 219 n n CAV H19 KCA sing 220 n n CAW H20 KCA sing 221 n n CAZ H21 KCA sing 222 n n CBA H22 KCA sing 223 n n CBB H23 KCA sing 224 n n CBC H24 KCA sing 225 n n # _atom_sites.entry_id 8WU1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id KCA _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id KCA _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N KCA . . . E 5 97.392 110.97 103.939 1 127.34 ? N KCA 501 R 1 HETATM 2 C CA KCA . . . E 5 96.345 111.191 102.957 1 127.34 ? CA KCA 501 R 1 HETATM 3 C C KCA . . . E 5 95.011 110.755 103.538 1 127.34 ? C KCA 501 R 1 HETATM 4 O O KCA . . . E 5 94.927 109.768 104.18 1 127.34 ? O KCA 501 R 1 HETATM 5 C CB KCA . . . E 5 96.747 110.38 101.704 1 127.34 ? CB KCA 501 R 1 HETATM 6 C CG1 KCA . . . E 5 95.52 110.026 100.822 1 127.34 ? CG1 KCA 501 R 1 HETATM 7 C CG2 KCA . . . E 5 97.46 109.056 102.131 1 127.34 ? CG2 KCA 501 R 1 HETATM 8 C CAB KCA . . . E 5 97.616 111.856 105.081 1 127.34 ? CAB KCA 501 R 1 HETATM 9 C CAG KCA . . . E 5 93.977 112.819 103.864 1 127.34 ? CAG KCA 501 R 1 HETATM 10 C CAL KCA . . . E 5 97.752 111.23 100.883 1 127.34 ? CAL KCA 501 R 1 HETATM 11 C CAM KCA . . . E 5 98.776 111.479 106.025 1 127.34 ? CAM KCA 501 R 1 HETATM 12 C CAP KCA . . . E 5 101.275 109.147 107.345 1 127.34 ? CAP KCA 501 R 1 HETATM 13 C CAQ KCA . . . E 5 100.787 108.29 108.558 1 127.34 ? CAQ KCA 501 R 1 HETATM 14 C CAR KCA . . . E 5 100.752 106.766 108.408 1 127.34 ? CAR KCA 501 R 1 HETATM 15 C CAS KCA . . . E 5 100.286 105.862 109.567 1 127.34 ? CAS KCA 501 R 1 HETATM 16 C CAT KCA . . . E 5 99.865 106.504 110.895 1 127.34 ? CAT KCA 501 R 1 HETATM 17 C CAV KCA . . . E 5 99.902 108.031 111.053 1 127.34 ? CAV KCA 501 R 1 HETATM 18 C CAW KCA . . . E 5 100.367 108.933 109.888 1 127.34 ? CAW KCA 501 R 1 HETATM 19 C CAX KCA . . . E 5 100.405 111.522 107.582 1 127.34 ? CAX KCA 501 R 1 HETATM 20 C CAY KCA . . . E 5 99.408 112.287 106.977 1 127.34 ? CAY KCA 501 R 1 HETATM 21 C CAZ KCA . . . E 5 99.179 113.784 107.425 1 127.34 ? CAZ KCA 501 R 1 HETATM 22 C CBA KCA . . . E 5 100.045 114.381 108.511 1 127.34 ? CBA KCA 501 R 1 HETATM 23 C CBB KCA . . . E 5 101.105 113.563 109.161 1 127.34 ? CBB KCA 501 R 1 HETATM 24 C CBC KCA . . . E 5 101.312 112.134 108.717 1 127.34 ? CBC KCA 501 R 1 HETATM 25 F FAU KCA . . . E 5 99.448 105.714 111.937 1 127.34 ? FAU KCA 501 R 1 HETATM 26 N NAN KCA . . . E 5 99.368 110.254 106.038 1 127.34 ? NAN KCA 501 R 1 HETATM 27 N NAO KCA . . . E 5 100.378 110.278 107.018 1 127.34 ? NAO KCA 501 R 1 HETATM 28 O OAA KCA . . . E 5 96.951 112.812 105.27 1 127.34 ? OAA KCA 501 R 1 HETATM 29 O OAF KCA . . . E 5 93.875 111.538 103.334 1 127.34 ? OAF KCA 501 R 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #