data_8WVF
#
_model_server_result.job_id            sh1zG0qHGiFV1cjN6cya5A 
_model_server_result.datetime_utc      '2024-10-10 06:23:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wvf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":701}' 
#
_entry.id    8WVF 
#
_exptl.entry_id    8WVF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.56 
_cell.angle_gamma         90 
_cell.entry_id            8WVF 
_cell.length_a            63.005 
_cell.length_b            48.116 
_cell.length_c            135.569 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WVF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 298 A ALA 298 1_555 A N ELY 299 A ELY 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? 
covale ? covale2 A C ELY 299 A ELY 299 1_555 A N ALA 300 A ALA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale3 B C ALA 298 B ALA 298 1_555 B N ELY 299 B ELY 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? 
covale ? covale4 B C ELY 299 B ELY 299 1_555 B N ALA 300 B ALA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 118 n n 
PA O2A FAD sing 119 n n 
PA O5B FAD sing 120 n n 
PA O3P FAD sing 121 n n 
O2A HOA2 FAD sing 122 n n 
O5B C5B FAD sing 123 n n 
C5B C4B FAD sing 124 n n 
C5B H51A FAD sing 125 n n 
C5B H52A FAD sing 126 n n 
C4B O4B FAD sing 127 n n 
C4B C3B FAD sing 128 n n 
C4B H4B FAD sing 129 n n 
O4B C1B FAD sing 130 n n 
C3B O3B FAD sing 131 n n 
C3B C2B FAD sing 132 n n 
C3B H3B FAD sing 133 n n 
O3B HO3A FAD sing 134 n n 
C2B O2B FAD sing 135 n n 
C2B C1B FAD sing 136 n n 
C2B H2B FAD sing 137 n n 
O2B HO2A FAD sing 138 n n 
C1B N9A FAD sing 139 n n 
C1B H1B FAD sing 140 n n 
N9A C8A FAD sing 141 n y 
N9A C4A FAD sing 142 n y 
C8A N7A FAD doub 143 n y 
C8A H8A FAD sing 144 n n 
N7A C5A FAD sing 145 n y 
C5A C6A FAD sing 146 n y 
C5A C4A FAD doub 147 n y 
C6A N6A FAD sing 148 n n 
C6A N1A FAD doub 149 n y 
N6A H61A FAD sing 150 n n 
N6A H62A FAD sing 151 n n 
N1A C2A FAD sing 152 n y 
C2A N3A FAD doub 153 n y 
C2A H2A FAD sing 154 n n 
N3A C4A FAD sing 155 n y 
N1 C2 FAD sing 156 n n 
N1 C10 FAD doub 157 n n 
C2 O2 FAD doub 158 n n 
C2 N3 FAD sing 159 n n 
N3 C4 FAD sing 160 n n 
N3 HN3 FAD sing 161 n n 
C4 O4 FAD doub 162 n n 
C4 C4X FAD sing 163 n n 
C4X N5 FAD doub 164 n n 
C4X C10 FAD sing 165 n n 
N5 C5X FAD sing 166 n n 
C5X C6 FAD doub 167 n y 
C5X C9A FAD sing 168 n y 
C6 C7 FAD sing 169 n y 
C6 H6 FAD sing 170 n n 
C7 C7M FAD sing 171 n n 
C7 C8 FAD doub 172 n y 
C7M HM71 FAD sing 173 n n 
C7M HM72 FAD sing 174 n n 
C7M HM73 FAD sing 175 n n 
C8 C8M FAD sing 176 n n 
C8 C9 FAD sing 177 n y 
C8M HM81 FAD sing 178 n n 
C8M HM82 FAD sing 179 n n 
C8M HM83 FAD sing 180 n n 
C9 C9A FAD doub 181 n y 
C9 H9 FAD sing 182 n n 
C9A N10 FAD sing 183 n n 
N10 C10 FAD sing 184 n n 
N10 C1' FAD sing 185 n n 
C1' C2' FAD sing 186 n n 
C1' "H1'1" FAD sing 187 n n 
C1' "H1'2" FAD sing 188 n n 
C2' O2' FAD sing 189 n n 
C2' C3' FAD sing 190 n n 
C2' H2' FAD sing 191 n n 
O2' HO2' FAD sing 192 n n 
C3' O3' FAD sing 193 n n 
C3' C4' FAD sing 194 n n 
C3' H3' FAD sing 195 n n 
O3' HO3' FAD sing 196 n n 
C4' O4' FAD sing 197 n n 
C4' C5' FAD sing 198 n n 
C4' H4' FAD sing 199 n n 
O4' HO4' FAD sing 200 n n 
C5' O5' FAD sing 201 n n 
C5' "H5'1" FAD sing 202 n n 
C5' "H5'2" FAD sing 203 n n 
O5' P FAD sing 204 n n 
P O1P FAD doub 205 n n 
P O2P FAD sing 206 n n 
P O3P FAD sing 207 n n 
O2P HOP2 FAD sing 208 n n 
#
_atom_sites.entry_id                     8WVF 
_atom_sites.fract_transf_matrix[1][1]    0.015872 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000432 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020783 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007379 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 701 701 FAD FAD . 
D 2 FAD B 1 701 701 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 14.666 0.83 45.557 1 42.7 ? PA FAD 701 A 1 
HETATM 2 O O1A FAD . . . C 2 15.045 1.243 44.184 1 48.36 ? O1A FAD 701 A 1 
HETATM 3 O O2A FAD . . . C 2 15.293 -0.486 46.031 1 48.32 ? O2A FAD 701 A 1 
HETATM 4 O O5B FAD . . . C 2 13.098 0.74 45.691 1 30.35 ? O5B FAD 701 A 1 
HETATM 5 C C5B FAD . . . C 2 12.232 1.669 45.006 1 38.85 ? C5B FAD 701 A 1 
HETATM 6 C C4B FAD . . . C 2 10.829 1.113 45.014 1 52.72 ? C4B FAD 701 A 1 
HETATM 7 O O4B FAD . . . C 2 9.88 2.179 44.771 1 59.25 ? O4B FAD 701 A 1 
HETATM 8 C C3B FAD . . . C 2 10.55 0.043 43.961 1 55.62 ? C3B FAD 701 A 1 
HETATM 9 O O3B FAD . . . C 2 9.706 -0.979 44.48 1 50.55 ? O3B FAD 701 A 1 
HETATM 10 C C2B FAD . . . C 2 9.863 0.835 42.846 1 57.63 ? C2B FAD 701 A 1 
HETATM 11 O O2B FAD . . . C 2 8.992 0.021 42.069 1 54.93 ? O2B FAD 701 A 1 
HETATM 12 C C1B FAD . . . C 2 9.068 1.851 43.662 1 57.7 ? C1B FAD 701 A 1 
HETATM 13 N N9A FAD . . . C 2 8.745 3.079 42.941 1 51.75 ? N9A FAD 701 A 1 
HETATM 14 C C8A FAD . . . C 2 9.6 3.858 42.207 1 51.61 ? C8A FAD 701 A 1 
HETATM 15 N N7A FAD . . . C 2 9.034 4.908 41.663 1 53.74 ? N7A FAD 701 A 1 
HETATM 16 C C5A FAD . . . C 2 7.711 4.812 42.066 1 51.9 ? C5A FAD 701 A 1 
HETATM 17 C C6A FAD . . . C 2 6.583 5.621 41.824 1 52.44 ? C6A FAD 701 A 1 
HETATM 18 N N6A FAD . . . C 2 6.61 6.734 41.087 1 54.49 ? N6A FAD 701 A 1 
HETATM 19 N N1A FAD . . . C 2 5.408 5.24 42.376 1 50.91 ? N1A FAD 701 A 1 
HETATM 20 C C2A FAD . . . C 2 5.375 4.13 43.117 1 48.5 ? C2A FAD 701 A 1 
HETATM 21 N N3A FAD . . . C 2 6.369 3.29 43.412 1 47.39 ? N3A FAD 701 A 1 
HETATM 22 C C4A FAD . . . C 2 7.518 3.689 42.854 1 49.48 ? C4A FAD 701 A 1 
HETATM 23 N N1 FAD . . . C 2 23.71 -0.21 47.559 1 31.59 ? N1 FAD 701 A 1 
HETATM 24 C C2 FAD . . . C 2 24.539 -0.959 48.343 1 33.22 ? C2 FAD 701 A 1 
HETATM 25 O O2 FAD . . . C 2 24.423 -0.983 49.574 1 27.78 ? O2 FAD 701 A 1 
HETATM 26 N N3 FAD . . . C 2 25.537 -1.716 47.756 1 36.96 ? N3 FAD 701 A 1 
HETATM 27 C C4 FAD . . . C 2 25.806 -1.802 46.404 1 36.81 ? C4 FAD 701 A 1 
HETATM 28 O O4 FAD . . . C 2 26.726 -2.511 46 1 35.81 ? O4 FAD 701 A 1 
HETATM 29 C C4X FAD . . . C 2 24.919 -1.003 45.58 1 34.81 ? C4X FAD 701 A 1 
HETATM 30 N N5 FAD . . . C 2 25.099 -1.02 44.286 1 32.71 ? N5 FAD 701 A 1 
HETATM 31 C C5X FAD . . . C 2 24.247 -0.256 43.5 1 32.41 ? C5X FAD 701 A 1 
HETATM 32 C C6 FAD . . . C 2 24.415 -0.272 42.115 1 23.74 ? C6 FAD 701 A 1 
HETATM 33 C C7 FAD . . . C 2 23.594 0.485 41.285 1 19.28 ? C7 FAD 701 A 1 
HETATM 34 C C7M FAD . . . C 2 23.811 0.451 39.795 1 17.74 ? C7M FAD 701 A 1 
HETATM 35 C C8 FAD . . . C 2 22.569 1.264 41.848 1 27.06 ? C8 FAD 701 A 1 
HETATM 36 C C8M FAD . . . C 2 21.657 2.089 40.978 1 26.73 ? C8M FAD 701 A 1 
HETATM 37 C C9 FAD . . . C 2 22.393 1.274 43.228 1 34.42 ? C9 FAD 701 A 1 
HETATM 38 C C9A FAD . . . C 2 23.22 0.522 44.054 1 33.67 ? C9A FAD 701 A 1 
HETATM 39 N N10 FAD . . . C 2 23.067 0.514 45.456 1 27.46 ? N10 FAD 701 A 1 
HETATM 40 C C10 FAD . . . C 2 23.899 -0.239 46.25 1 29.44 ? C10 FAD 701 A 1 
HETATM 41 C C1' FAD . . . C 2 22.011 1.305 46.099 1 25.28 ? C1' FAD 701 A 1 
HETATM 42 C C2' FAD . . . C 2 20.739 0.506 46.353 1 23.2 ? C2' FAD 701 A 1 
HETATM 43 O O2' FAD . . . C 2 20.204 0.015 45.123 1 27.67 ? O2' FAD 701 A 1 
HETATM 44 C C3' FAD . . . C 2 19.703 1.407 47.027 1 22.01 ? C3' FAD 701 A 1 
HETATM 45 O O3' FAD . . . C 2 20.328 2.13 48.081 1 21.77 ? O3' FAD 701 A 1 
HETATM 46 C C4' FAD . . . C 2 18.496 0.655 47.587 1 21.28 ? C4' FAD 701 A 1 
HETATM 47 O O4' FAD . . . C 2 17.757 0.081 46.509 1 16.13 ? O4' FAD 701 A 1 
HETATM 48 C C5' FAD . . . C 2 17.604 1.537 48.434 1 16.15 ? C5' FAD 701 A 1 
HETATM 49 O O5' FAD . . . C 2 16.288 0.949 48.499 1 16.2 ? O5' FAD 701 A 1 
HETATM 50 P P FAD . . . C 2 14.999 1.792 48.168 1 28.92 ? P FAD 701 A 1 
HETATM 51 O O1P FAD . . . C 2 13.746 0.973 48.494 1 22.22 ? O1P FAD 701 A 1 
HETATM 52 O O2P FAD . . . C 2 15.069 3.122 48.822 1 23.1 ? O2P FAD 701 A 1 
HETATM 53 O O3P FAD . . . C 2 15.07 1.96 46.593 1 38.19 ? O3P FAD 701 A 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#