data_8WWW # _model_server_result.job_id uL4y-X4tjJiobe91N6PEZQ _model_server_result.datetime_utc '2024-11-09 02:39:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8www # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":607}' # _entry.id 8WWW # _exptl.entry_id 8WWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.86 _cell.angle_gamma 90 _cell.entry_id 8WWW _cell.length_a 189.998 _cell.length_b 77.308 _cell.length_c 102.648 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,M 1 1 B,F,G,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 138 n n C1 C2 GOL sing 139 n n C1 H11 GOL sing 140 n n C1 H12 GOL sing 141 n n O1 HO1 GOL sing 142 n n C2 O2 GOL sing 143 n n C2 C3 GOL sing 144 n n C2 H2 GOL sing 145 n n O2 HO2 GOL sing 146 n n C3 O3 GOL sing 147 n n C3 H31 GOL sing 148 n n C3 H32 GOL sing 149 n n O3 HO3 GOL sing 150 n n # _atom_sites.entry_id 8WWW _atom_sites.fract_transf_matrix[1][1] 0.005263 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002901 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 YG3 A 1 601 601 YG3 YG3 . D 3 DMS A 1 602 602 DMS DMS . E 3 DMS A 1 603 603 DMS DMS . F 2 YG3 B 1 601 601 YG3 YG3 . G 4 SO4 B 1 602 602 SO4 SO4 . H 4 SO4 B 1 603 603 SO4 SO4 . I 3 DMS B 1 604 604 DMS DMS . J 3 DMS B 1 605 605 DMS DMS . K 3 DMS B 1 606 606 DMS DMS . L 5 GOL B 1 607 607 GOL GOL . M 6 HOH A 1 701 703 HOH HOH . M 6 HOH A 2 702 701 HOH HOH . M 6 HOH A 3 703 702 HOH HOH . M 6 HOH A 4 704 704 HOH HOH . M 6 HOH A 5 705 705 HOH HOH . M 6 HOH A 6 706 706 HOH HOH . M 6 HOH A 7 707 708 HOH HOH . M 6 HOH A 8 708 707 HOH HOH . M 6 HOH A 9 709 709 HOH HOH . M 6 HOH A 10 710 711 HOH HOH . M 6 HOH A 11 711 712 HOH HOH . M 6 HOH A 12 712 710 HOH HOH . M 6 HOH A 13 713 713 HOH HOH . M 6 HOH A 14 714 721 HOH HOH . M 6 HOH A 15 715 715 HOH HOH . M 6 HOH A 16 716 717 HOH HOH . M 6 HOH A 17 717 719 HOH HOH . M 6 HOH A 18 718 718 HOH HOH . M 6 HOH A 19 719 729 HOH HOH . M 6 HOH A 20 720 716 HOH HOH . M 6 HOH A 21 721 714 HOH HOH . M 6 HOH A 22 722 724 HOH HOH . M 6 HOH A 23 723 722 HOH HOH . M 6 HOH A 24 724 720 HOH HOH . M 6 HOH A 25 725 728 HOH HOH . M 6 HOH A 26 726 723 HOH HOH . M 6 HOH A 27 727 725 HOH HOH . M 6 HOH A 28 728 730 HOH HOH . M 6 HOH A 29 729 726 HOH HOH . M 6 HOH A 30 730 727 HOH HOH . N 6 HOH B 1 701 701 HOH HOH . N 6 HOH B 2 702 703 HOH HOH . N 6 HOH B 3 703 702 HOH HOH . N 6 HOH B 4 704 704 HOH HOH . N 6 HOH B 5 705 705 HOH HOH . N 6 HOH B 6 706 706 HOH HOH . N 6 HOH B 7 707 707 HOH HOH . N 6 HOH B 8 708 709 HOH HOH . N 6 HOH B 9 709 710 HOH HOH . N 6 HOH B 10 710 711 HOH HOH . N 6 HOH B 11 711 714 HOH HOH . N 6 HOH B 12 712 708 HOH HOH . N 6 HOH B 13 713 712 HOH HOH . N 6 HOH B 14 714 715 HOH HOH . N 6 HOH B 15 715 717 HOH HOH . N 6 HOH B 16 716 718 HOH HOH . N 6 HOH B 17 717 713 HOH HOH . N 6 HOH B 18 718 716 HOH HOH . N 6 HOH B 19 719 719 HOH HOH . N 6 HOH B 20 720 720 HOH HOH . N 6 HOH B 21 721 722 HOH HOH . N 6 HOH B 22 722 721 HOH HOH . N 6 HOH B 23 723 723 HOH HOH . N 6 HOH B 24 724 724 HOH HOH . N 6 HOH B 25 725 731 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . L 5 -17.525 -28.623 27.886 1 56.13 ? C1 GOL 607 B 1 HETATM 2 O O1 GOL . . . L 5 -17.852 -29.806 27.226 1 49.3 ? O1 GOL 607 B 1 HETATM 3 C C2 GOL . . . L 5 -15.997 -28.351 27.693 1 59.85 ? C2 GOL 607 B 1 HETATM 4 O O2 GOL . . . L 5 -15.653 -27.001 27.959 1 57.74 ? O2 GOL 607 B 1 HETATM 5 C C3 GOL . . . L 5 -15.289 -29.386 28.652 1 60.96 ? C3 GOL 607 B 1 HETATM 6 O O3 GOL . . . L 5 -13.952 -28.969 28.822 1 58.89 ? O3 GOL 607 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #