data_8WY7
#
_model_server_result.job_id            rOg68Dt1HM3RvIBzb7W0mw 
_model_server_result.datetime_utc      '2024-10-10 01:24:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wy7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    8WY7 
#
_exptl.entry_id    8WY7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              551.649 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8WY7 
_cell.length_a            140.15 
_cell.length_b            140.15 
_cell.length_c            134.299 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WY7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F,G,I 1 1 
B,E,H 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -22.383167 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C31 H38 F N3 O5' 
_chem_comp.formula_weight    551.649 
_chem_comp.id                XHN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAI CAH XHN sing 376 n n 
OAK CAH XHN sing 377 n n 
CAH CAJ XHN sing 378 n n 
CAH CAE XHN sing 379 n n 
CAE CAF XHN doub 380 n y 
CAE CAD XHN sing 381 n y 
CAF CAA XHN sing 382 n y 
CAD CAC XHN doub 383 n y 
O C XHN doub 384 n n 
CBJ CBI XHN sing 385 n n 
CBJ CBK XHN sing 386 n n 
CAA CAU XHN sing 387 n n 
CAA CAB XHN doub 388 n y 
CAC CAB XHN sing 389 n y 
C NBF XHN sing 390 n n 
C CA XHN sing 391 n n 
N CAV XHN sing 392 n n 
N CA XHN sing 393 n n 
CBI CBH XHN sing 394 n n 
CBH NBF XHN sing 395 n n 
CBH CBM XHN sing 396 n n 
CAU CAV XHN sing 397 n n 
CAU CAZ XHN doub 398 n n 
CAV CAW XHN doub 399 n n 
CAB OAG XHN sing 400 n n 
OBN CBK XHN sing 401 n n 
CAZ NAY XHN sing 402 n n 
CBL CBK XHN sing 403 n n 
CBL CBM XHN sing 404 n n 
CAW CAX XHN sing 405 n n 
CAR CAM XHN sing 406 n n 
NAY CAX XHN sing 407 n n 
NAY CBC XHN sing 408 n n 
CAX OBA XHN doub 409 n n 
OAG CAL XHN sing 410 n n 
CAM CAL XHN doub 411 n y 
CAM CAN XHN sing 412 n y 
CAL CAQ XHN sing 413 n y 
CAN CAO XHN doub 414 n y 
CAQ CAS XHN sing 415 n n 
CAQ CAP XHN doub 416 n y 
CAO CAP XHN sing 417 n y 
CAO FAT XHN sing 418 n n 
N H1 XHN sing 419 n n 
CBI H2 XHN sing 420 n n 
CBI H3 XHN sing 421 n n 
CBJ H4 XHN sing 422 n n 
CBJ H5 XHN sing 423 n n 
CBK H6 XHN sing 424 n n 
OBN H7 XHN sing 425 n n 
CBL H8 XHN sing 426 n n 
CBL H9 XHN sing 427 n n 
CBM H10 XHN sing 428 n n 
CBM H11 XHN sing 429 n n 
CBH H12 XHN sing 430 n n 
NBF H13 XHN sing 431 n n 
CA H14 XHN sing 432 n n 
CA H15 XHN sing 433 n n 
CAW H16 XHN sing 434 n n 
CBC H17 XHN sing 435 n n 
CBC H18 XHN sing 436 n n 
CBC H19 XHN sing 437 n n 
CAZ H20 XHN sing 438 n n 
CAF H21 XHN sing 439 n n 
CAI H22 XHN sing 440 n n 
CAI H23 XHN sing 441 n n 
CAI H24 XHN sing 442 n n 
CAJ H25 XHN sing 443 n n 
CAJ H26 XHN sing 444 n n 
CAJ H27 XHN sing 445 n n 
OAK H28 XHN sing 446 n n 
CAD H29 XHN sing 447 n n 
CAC H30 XHN sing 448 n n 
CAR H31 XHN sing 449 n n 
CAR H32 XHN sing 450 n n 
CAR H33 XHN sing 451 n n 
CAN H34 XHN sing 452 n n 
CAP H35 XHN sing 453 n n 
CAS H36 XHN sing 454 n n 
CAS H37 XHN sing 455 n n 
CAS H38 XHN sing 456 n n 
#
_atom_sites.entry_id                     8WY7 
_atom_sites.fract_transf_matrix[1][1]    0.007135 
_atom_sites.fract_transf_matrix[1][2]    0.00412 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008239 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007446 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 XHN A 1 201 191 XHN JIU . 
E 2 XHN B 1 201 192 XHN JIU . 
F 2 XHN C 1 201 193 XHN JIU . 
G 3 HOH A 1 301 4 HOH HOH . 
G 3 HOH A 2 302 3 HOH HOH . 
H 3 HOH B 1 301 2 HOH HOH . 
I 3 HOH C 1 301 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O XHN . . . D 2 -66.735 28.675 4.323 1 88.49 ? O XHN 201 A 1 
HETATM 2 N N XHN . . . D 2 -64.476 29.939 5.455 1 83.97 ? N XHN 201 A 1 
HETATM 3 C C XHN . . . D 2 -66.882 29.231 5.417 1 91.75 ? C XHN 201 A 1 
HETATM 4 C CBI XHN . . . D 2 -70.469 29.68 5.55 1 115.26 ? CBI XHN 201 A 1 
HETATM 5 C CBJ XHN . . . D 2 -71.79 28.949 5.245 1 123.79 ? CBJ XHN 201 A 1 
HETATM 6 C CBK XHN . . . D 2 -71.959 27.712 6.263 1 122.05 ? CBK XHN 201 A 1 
HETATM 7 O OBN XHN . . . D 2 -73.173 26.96 6.036 1 116.59 ? OBN XHN 201 A 1 
HETATM 8 C CBL XHN . . . D 2 -70.779 26.752 6.219 1 110.23 ? CBL XHN 201 A 1 
HETATM 9 C CBM XHN . . . D 2 -69.536 27.522 6.608 1 111.82 ? CBM XHN 201 A 1 
HETATM 10 C CBH XHN . . . D 2 -69.282 28.678 5.601 1 116.25 ? CBH XHN 201 A 1 
HETATM 11 N NBF XHN . . . D 2 -68.051 29.305 6.078 1 102.86 ? NBF XHN 201 A 1 
HETATM 12 C CA XHN . . . D 2 -65.741 29.842 6.222 1 83.36 ? CA XHN 201 A 1 
HETATM 13 C CAV XHN . . . D 2 -63.359 30.593 5.878 1 76.68 ? CAV XHN 201 A 1 
HETATM 14 C CAW XHN . . . D 2 -63.444 31.898 6.374 1 75.31 ? CAW XHN 201 A 1 
HETATM 15 C CAX XHN . . . D 2 -62.329 32.59 6.811 1 74.75 ? CAX XHN 201 A 1 
HETATM 16 O OBA XHN . . . D 2 -62.442 33.722 7.256 1 82.4 ? OBA XHN 201 A 1 
HETATM 17 N NAY XHN . . . D 2 -61.128 32.03 6.73 1 78.41 ? NAY XHN 201 A 1 
HETATM 18 C CBC XHN . . . D 2 -59.938 32.765 7.201 1 74.21 ? CBC XHN 201 A 1 
HETATM 19 C CAZ XHN . . . D 2 -60.996 30.726 6.214 1 77.11 ? CAZ XHN 201 A 1 
HETATM 20 C CAU XHN . . . D 2 -62.09 29.971 5.794 1 69.35 ? CAU XHN 201 A 1 
HETATM 21 C CAA XHN . . . D 2 -61.774 28.68 5.313 1 73.18 ? CAA XHN 201 A 1 
HETATM 22 C CAF XHN . . . D 2 -60.941 28.581 4.162 1 75.63 ? CAF XHN 201 A 1 
HETATM 23 C CAE XHN . . . D 2 -60.536 27.358 3.593 1 70.04 ? CAE XHN 201 A 1 
HETATM 24 C CAH XHN . . . D 2 -59.668 27.285 2.424 1 77.97 ? CAH XHN 201 A 1 
HETATM 25 C CAI XHN . . . D 2 -60.147 26.29 1.343 1 87.85 ? CAI XHN 201 A 1 
HETATM 26 C CAJ XHN . . . D 2 -58.31 26.805 2.855 1 59.67 ? CAJ XHN 201 A 1 
HETATM 27 O OAK XHN . . . D 2 -59.432 28.581 1.772 1 90.29 ? OAK XHN 201 A 1 
HETATM 28 C CAD XHN . . . D 2 -60.982 26.206 4.253 1 68.26 ? CAD XHN 201 A 1 
HETATM 29 C CAC XHN . . . D 2 -61.792 26.236 5.387 1 64.55 ? CAC XHN 201 A 1 
HETATM 30 C CAB XHN . . . D 2 -62.193 27.482 5.94 1 71.91 ? CAB XHN 201 A 1 
HETATM 31 O OAG XHN . . . D 2 -62.981 27.625 7.06 1 68.72 ? OAG XHN 201 A 1 
HETATM 32 C CAL XHN . . . D 2 -63.247 26.513 7.854 1 70.79 ? CAL XHN 201 A 1 
HETATM 33 C CAM XHN . . . D 2 -64.309 25.693 7.499 1 67.27 ? CAM XHN 201 A 1 
HETATM 34 C CAR XHN . . . D 2 -65.098 26.003 6.392 1 67.29 ? CAR XHN 201 A 1 
HETATM 35 C CAN XHN . . . D 2 -64.596 24.564 8.261 1 69.61 ? CAN XHN 201 A 1 
HETATM 36 C CAO XHN . . . D 2 -63.872 24.259 9.403 1 78.87 ? CAO XHN 201 A 1 
HETATM 37 F FAT XHN . . . D 2 -64.243 22.989 10.242 1 88.17 ? FAT XHN 201 A 1 
HETATM 38 C CAP XHN . . . D 2 -62.795 25.076 9.749 1 82.59 ? CAP XHN 201 A 1 
HETATM 39 C CAQ XHN . . . D 2 -62.482 26.2 8.978 1 74.5 ? CAQ XHN 201 A 1 
HETATM 40 C CAS XHN . . . D 2 -61.428 26.956 9.422 1 78.21 ? CAS XHN 201 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           40 
#