data_8WY7
#
_model_server_result.job_id            HDGcy5E1bxPz0jwvh24zkA 
_model_server_result.datetime_utc      '2024-10-10 01:14:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wy7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    8WY7 
#
_exptl.entry_id    8WY7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              551.649 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8WY7 
_cell.length_a            140.15 
_cell.length_b            140.15 
_cell.length_c            134.299 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WY7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F,G,I 1 1 
B,E,H 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -22.383167 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C31 H38 F N3 O5' 
_chem_comp.formula_weight    551.649 
_chem_comp.id                XHN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAI CAH XHN sing 376 n n 
OAK CAH XHN sing 377 n n 
CAH CAJ XHN sing 378 n n 
CAH CAE XHN sing 379 n n 
CAE CAF XHN doub 380 n y 
CAE CAD XHN sing 381 n y 
CAF CAA XHN sing 382 n y 
CAD CAC XHN doub 383 n y 
O C XHN doub 384 n n 
CBJ CBI XHN sing 385 n n 
CBJ CBK XHN sing 386 n n 
CAA CAU XHN sing 387 n n 
CAA CAB XHN doub 388 n y 
CAC CAB XHN sing 389 n y 
C NBF XHN sing 390 n n 
C CA XHN sing 391 n n 
N CAV XHN sing 392 n n 
N CA XHN sing 393 n n 
CBI CBH XHN sing 394 n n 
CBH NBF XHN sing 395 n n 
CBH CBM XHN sing 396 n n 
CAU CAV XHN sing 397 n n 
CAU CAZ XHN doub 398 n n 
CAV CAW XHN doub 399 n n 
CAB OAG XHN sing 400 n n 
OBN CBK XHN sing 401 n n 
CAZ NAY XHN sing 402 n n 
CBL CBK XHN sing 403 n n 
CBL CBM XHN sing 404 n n 
CAW CAX XHN sing 405 n n 
CAR CAM XHN sing 406 n n 
NAY CAX XHN sing 407 n n 
NAY CBC XHN sing 408 n n 
CAX OBA XHN doub 409 n n 
OAG CAL XHN sing 410 n n 
CAM CAL XHN doub 411 n y 
CAM CAN XHN sing 412 n y 
CAL CAQ XHN sing 413 n y 
CAN CAO XHN doub 414 n y 
CAQ CAS XHN sing 415 n n 
CAQ CAP XHN doub 416 n y 
CAO CAP XHN sing 417 n y 
CAO FAT XHN sing 418 n n 
N H1 XHN sing 419 n n 
CBI H2 XHN sing 420 n n 
CBI H3 XHN sing 421 n n 
CBJ H4 XHN sing 422 n n 
CBJ H5 XHN sing 423 n n 
CBK H6 XHN sing 424 n n 
OBN H7 XHN sing 425 n n 
CBL H8 XHN sing 426 n n 
CBL H9 XHN sing 427 n n 
CBM H10 XHN sing 428 n n 
CBM H11 XHN sing 429 n n 
CBH H12 XHN sing 430 n n 
NBF H13 XHN sing 431 n n 
CA H14 XHN sing 432 n n 
CA H15 XHN sing 433 n n 
CAW H16 XHN sing 434 n n 
CBC H17 XHN sing 435 n n 
CBC H18 XHN sing 436 n n 
CBC H19 XHN sing 437 n n 
CAZ H20 XHN sing 438 n n 
CAF H21 XHN sing 439 n n 
CAI H22 XHN sing 440 n n 
CAI H23 XHN sing 441 n n 
CAI H24 XHN sing 442 n n 
CAJ H25 XHN sing 443 n n 
CAJ H26 XHN sing 444 n n 
CAJ H27 XHN sing 445 n n 
OAK H28 XHN sing 446 n n 
CAD H29 XHN sing 447 n n 
CAC H30 XHN sing 448 n n 
CAR H31 XHN sing 449 n n 
CAR H32 XHN sing 450 n n 
CAR H33 XHN sing 451 n n 
CAN H34 XHN sing 452 n n 
CAP H35 XHN sing 453 n n 
CAS H36 XHN sing 454 n n 
CAS H37 XHN sing 455 n n 
CAS H38 XHN sing 456 n n 
#
_atom_sites.entry_id                     8WY7 
_atom_sites.fract_transf_matrix[1][1]    0.007135 
_atom_sites.fract_transf_matrix[1][2]    0.00412 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008239 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007446 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 XHN A 1 201 191 XHN JIU . 
E 2 XHN B 1 201 192 XHN JIU . 
F 2 XHN C 1 201 193 XHN JIU . 
G 3 HOH A 1 301 4 HOH HOH . 
G 3 HOH A 2 302 3 HOH HOH . 
H 3 HOH B 1 301 2 HOH HOH . 
I 3 HOH C 1 301 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O XHN . . . E 2 -55.682 18.173 12.383 1 111.64 ? O XHN 201 B 1 
HETATM 2 N N XHN . . . E 2 -56.954 16.901 10.322 1 80.89 ? N XHN 201 B 1 
HETATM 3 C C XHN . . . E 2 -56.372 17.195 12.665 1 92.29 ? C XHN 201 B 1 
HETATM 4 C CBI XHN . . . E 2 -55.168 17.588 15.618 1 132.15 ? CBI XHN 201 B 1 
HETATM 5 C CBJ XHN . . . E 2 -54.858 18.164 16.999 1 137.76 ? CBJ XHN 201 B 1 
HETATM 6 C CBK XHN . . . E 2 -55.973 17.62 17.919 1 142.46 ? CBK XHN 201 B 1 
HETATM 7 O OBN XHN . . . E 2 -55.664 17.825 19.337 1 132.83 ? OBN XHN 201 B 1 
HETATM 8 C CBL XHN . . . E 2 -57.31 18.27 17.502 1 142.54 ? CBL XHN 201 B 1 
HETATM 9 C CBM XHN . . . E 2 -57.724 17.701 16.121 1 127.78 ? CBM XHN 201 B 1 
HETATM 10 C CBH XHN . . . E 2 -56.61 17.859 15.055 1 119.05 ? CBH XHN 201 B 1 
HETATM 11 N NBF XHN . . . E 2 -56.844 16.927 13.908 1 103.65 ? NBF XHN 201 B 1 
HETATM 12 C CA XHN . . . E 2 -56.628 16.19 11.597 1 84.67 ? CA XHN 201 B 1 
HETATM 13 C CAV XHN . . . E 2 -57.333 16.307 9.142 1 86.22 ? CAV XHN 201 B 1 
HETATM 14 C CAW XHN . . . E 2 -57.744 14.955 9.085 1 88.53 ? CAW XHN 201 B 1 
HETATM 15 C CAX XHN . . . E 2 -58.18 14.345 7.908 1 81.45 ? CAX XHN 201 B 1 
HETATM 16 O OBA XHN . . . E 2 -58.548 13.169 7.911 1 93.44 ? OBA XHN 201 B 1 
HETATM 17 N NAY XHN . . . E 2 -58.21 15.046 6.784 1 71.38 ? NAY XHN 201 B 1 
HETATM 18 C CBC XHN . . . E 2 -58.668 14.426 5.546 1 72.09 ? CBC XHN 201 B 1 
HETATM 19 C CAZ XHN . . . E 2 -57.815 16.372 6.781 1 81.07 ? CAZ XHN 201 B 1 
HETATM 20 C CAU XHN . . . E 2 -57.346 17.045 7.912 1 81.01 ? CAU XHN 201 B 1 
HETATM 21 C CAA XHN . . . E 2 -57.051 18.405 7.622 1 79.42 ? CAA XHN 201 B 1 
HETATM 22 C CAF XHN . . . E 2 -56.075 18.794 6.654 1 80.32 ? CAF XHN 201 B 1 
HETATM 23 C CAE XHN . . . E 2 -55.832 20.147 6.313 1 67.54 ? CAE XHN 201 B 1 
HETATM 24 C CAH XHN . . . E 2 -54.852 20.598 5.379 1 70.74 ? CAH XHN 201 B 1 
HETATM 25 C CAI XHN . . . E 2 -53.798 21.443 6.094 1 78.42 ? CAI XHN 201 B 1 
HETATM 26 C CAJ XHN . . . E 2 -55.52 21.435 4.302 1 69.55 ? CAJ XHN 201 B 1 
HETATM 27 O OAK XHN . . . E 2 -54.112 19.571 4.686 1 74.61 ? OAK XHN 201 B 1 
HETATM 28 C CAD XHN . . . E 2 -56.623 21.088 6.944 1 69.23 ? CAD XHN 201 B 1 
HETATM 29 C CAC XHN . . . E 2 -57.581 20.735 7.887 1 75.39 ? CAC XHN 201 B 1 
HETATM 30 C CAB XHN . . . E 2 -57.835 19.406 8.208 1 76.96 ? CAB XHN 201 B 1 
HETATM 31 O OAG XHN . . . E 2 -58.773 18.972 9.123 1 79.75 ? OAG XHN 201 B 1 
HETATM 32 C CAL XHN . . . E 2 -59.568 19.838 9.783 1 71.48 ? CAL XHN 201 B 1 
HETATM 33 C CAM XHN . . . E 2 -60.848 19.996 9.284 1 79.26 ? CAM XHN 201 B 1 
HETATM 34 C CAR XHN . . . E 2 -61.253 19.301 8.175 1 78.68 ? CAR XHN 201 B 1 
HETATM 35 C CAN XHN . . . E 2 -61.72 20.873 9.92 1 87.41 ? CAN XHN 201 B 1 
HETATM 36 C CAO XHN . . . E 2 -61.282 21.58 11.044 1 85.17 ? CAO XHN 201 B 1 
HETATM 37 F FAT XHN . . . E 2 -62.076 22.383 11.572 1 84.21 ? FAT XHN 201 B 1 
HETATM 38 C CAP XHN . . . E 2 -59.985 21.408 11.558 1 73.94 ? CAP XHN 201 B 1 
HETATM 39 C CAQ XHN . . . E 2 -59.105 20.53 10.912 1 70.64 ? CAQ XHN 201 B 1 
HETATM 40 C CAS XHN . . . E 2 -57.821 20.371 11.436 1 72.05 ? CAS XHN 201 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           40 
#