data_8WYG
#
_model_server_result.job_id            q0pXCQM747XFFcgiRIDVvQ 
_model_server_result.datetime_utc      '2024-10-10 01:15:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wyg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":501}' 
#
_entry.id    8WYG 
#
_exptl.entry_id    8WYG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              551.649 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WYG 
_cell.length_a            91.782 
_cell.length_b            95.497 
_cell.length_c            109.08 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WYG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C31 H38 F N3 O5' 
_chem_comp.formula_weight    551.649 
_chem_comp.id                XHN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAI CAH XHN sing 376 n n 
OAK CAH XHN sing 377 n n 
CAH CAJ XHN sing 378 n n 
CAH CAE XHN sing 379 n n 
CAE CAF XHN doub 380 n y 
CAE CAD XHN sing 381 n y 
CAF CAA XHN sing 382 n y 
CAD CAC XHN doub 383 n y 
O C XHN doub 384 n n 
CBJ CBI XHN sing 385 n n 
CBJ CBK XHN sing 386 n n 
CAA CAU XHN sing 387 n n 
CAA CAB XHN doub 388 n y 
CAC CAB XHN sing 389 n y 
C NBF XHN sing 390 n n 
C CA XHN sing 391 n n 
N CAV XHN sing 392 n n 
N CA XHN sing 393 n n 
CBI CBH XHN sing 394 n n 
CBH NBF XHN sing 395 n n 
CBH CBM XHN sing 396 n n 
CAU CAV XHN sing 397 n n 
CAU CAZ XHN doub 398 n n 
CAV CAW XHN doub 399 n n 
CAB OAG XHN sing 400 n n 
OBN CBK XHN sing 401 n n 
CAZ NAY XHN sing 402 n n 
CBL CBK XHN sing 403 n n 
CBL CBM XHN sing 404 n n 
CAW CAX XHN sing 405 n n 
CAR CAM XHN sing 406 n n 
NAY CAX XHN sing 407 n n 
NAY CBC XHN sing 408 n n 
CAX OBA XHN doub 409 n n 
OAG CAL XHN sing 410 n n 
CAM CAL XHN doub 411 n y 
CAM CAN XHN sing 412 n y 
CAL CAQ XHN sing 413 n y 
CAN CAO XHN doub 414 n y 
CAQ CAS XHN sing 415 n n 
CAQ CAP XHN doub 416 n y 
CAO CAP XHN sing 417 n y 
CAO FAT XHN sing 418 n n 
N H1 XHN sing 419 n n 
CBI H2 XHN sing 420 n n 
CBI H3 XHN sing 421 n n 
CBJ H4 XHN sing 422 n n 
CBJ H5 XHN sing 423 n n 
CBK H6 XHN sing 424 n n 
OBN H7 XHN sing 425 n n 
CBL H8 XHN sing 426 n n 
CBL H9 XHN sing 427 n n 
CBM H10 XHN sing 428 n n 
CBM H11 XHN sing 429 n n 
CBH H12 XHN sing 430 n n 
NBF H13 XHN sing 431 n n 
CA H14 XHN sing 432 n n 
CA H15 XHN sing 433 n n 
CAW H16 XHN sing 434 n n 
CBC H17 XHN sing 435 n n 
CBC H18 XHN sing 436 n n 
CBC H19 XHN sing 437 n n 
CAZ H20 XHN sing 438 n n 
CAF H21 XHN sing 439 n n 
CAI H22 XHN sing 440 n n 
CAI H23 XHN sing 441 n n 
CAI H24 XHN sing 442 n n 
CAJ H25 XHN sing 443 n n 
CAJ H26 XHN sing 444 n n 
CAJ H27 XHN sing 445 n n 
OAK H28 XHN sing 446 n n 
CAD H29 XHN sing 447 n n 
CAC H30 XHN sing 448 n n 
CAR H31 XHN sing 449 n n 
CAR H32 XHN sing 450 n n 
CAR H33 XHN sing 451 n n 
CAN H34 XHN sing 452 n n 
CAP H35 XHN sing 453 n n 
CAS H36 XHN sing 454 n n 
CAS H37 XHN sing 455 n n 
CAS H38 XHN sing 456 n n 
#
_atom_sites.entry_id                     8WYG 
_atom_sites.fract_transf_matrix[1][1]    0.010895 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010472 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009168 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 XHN A 1 501 1 XHN JIX . 
F 2 XHN B 1 501 2 XHN JIX . 
G 2 XHN C 1 501 3 XHN JIX . 
H 2 XHN D 1 501 4 XHN JIX . 
I 3 HOH C 1 601 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O XHN . . . G 2 9.927 -5.618 -16.871 1 50.11 ? O XHN 501 C 1 
HETATM 2 N N XHN . . . G 2 12.277 -4.207 -16.583 1 38.64 ? N XHN 501 C 1 
HETATM 3 C C XHN . . . G 2 10.068 -4.986 -15.813 1 44.98 ? C XHN 501 C 1 
HETATM 4 C CBI XHN . . . G 2 6.956 -5.302 -13.896 1 40.63 ? CBI XHN 501 C 1 
HETATM 5 C CBJ XHN . . . G 2 5.682 -6.04 -14.111 1 41.33 ? CBJ XHN 501 C 1 
HETATM 6 C CBK XHN . . . G 2 5.973 -7.527 -13.768 1 41.52 ? CBK XHN 501 C 1 
HETATM 7 O OBN XHN . . . G 2 4.808 -8.288 -14.069 1 40.24 ? OBN XHN 501 C 1 
HETATM 8 C CBL XHN . . . G 2 7.163 -8.128 -14.546 1 43.1 ? CBL XHN 501 C 1 
HETATM 9 C CBM XHN . . . G 2 8.384 -7.241 -14.48 1 42.06 ? CBM XHN 501 C 1 
HETATM 10 C CBH XHN . . . G 2 7.977 -5.814 -14.873 1 41.46 ? CBH XHN 501 C 1 
HETATM 11 N NBF XHN . . . G 2 9.176 -4.99 -14.807 1 43.33 ? NBF XHN 501 C 1 
HETATM 12 C CA XHN . . . G 2 11.283 -4.148 -15.491 1 42.29 ? CA XHN 501 C 1 
HETATM 13 C CAV XHN . . . G 2 13.465 -3.589 -16.462 1 36.37 ? CAV XHN 501 C 1 
HETATM 14 C CAW XHN . . . G 2 13.782 -2.672 -15.424 1 35.44 ? CAW XHN 501 C 1 
HETATM 15 C CAX XHN . . . G 2 15.041 -2.057 -15.337 1 35.52 ? CAX XHN 501 C 1 
HETATM 16 O OBA XHN . . . G 2 15.318 -1.263 -14.433 1 37.69 ? OBA XHN 501 C 1 
HETATM 17 N NAY XHN . . . G 2 15.97 -2.326 -16.254 1 35.88 ? NAY XHN 501 C 1 
HETATM 18 C CBC XHN . . . G 2 17.318 -1.702 -16.179 1 36.16 ? CBC XHN 501 C 1 
HETATM 19 C CAZ XHN . . . G 2 15.681 -3.228 -17.298 1 36.83 ? CAZ XHN 501 C 1 
HETATM 20 C CAU XHN . . . G 2 14.44 -3.862 -17.419 1 35.34 ? CAU XHN 501 C 1 
HETATM 21 C CAA XHN . . . G 2 14.322 -4.704 -18.512 1 35.09 ? CAA XHN 501 C 1 
HETATM 22 C CAF XHN . . . G 2 14.315 -4.097 -19.779 1 34.06 ? CAF XHN 501 C 1 
HETATM 23 C CAE XHN . . . G 2 14.243 -4.862 -20.974 1 32.58 ? CAE XHN 501 C 1 
HETATM 24 C CAH XHN . . . G 2 14.212 -4.229 -22.266 1 28.42 ? CAH XHN 501 C 1 
HETATM 25 C CAI XHN . . . G 2 12.753 -4.17 -22.776 1 26.68 ? CAI XHN 501 C 1 
HETATM 26 C CAJ XHN . . . G 2 15.022 -5.055 -23.255 1 27.19 ? CAJ XHN 501 C 1 
HETATM 27 O OAK XHN . . . G 2 14.793 -2.877 -22.257 1 25.06 ? OAK XHN 501 C 1 
HETATM 28 C CAD XHN . . . G 2 14.17 -6.27 -20.847 1 33.51 ? CAD XHN 501 C 1 
HETATM 29 C CAC XHN . . . G 2 14.197 -6.871 -19.59 1 36.41 ? CAC XHN 501 C 1 
HETATM 30 C CAB XHN . . . G 2 14.278 -6.103 -18.405 1 38.1 ? CAB XHN 501 C 1 
HETATM 31 O OAG XHN . . . G 2 14.287 -6.636 -17.127 1 39.07 ? OAG XHN 501 C 1 
HETATM 32 C CAL XHN . . . G 2 14.322 -7.996 -16.902 1 43.17 ? CAL XHN 501 C 1 
HETATM 33 C CAM XHN . . . G 2 15.552 -8.646 -16.817 1 46.03 ? CAM XHN 501 C 1 
HETATM 34 C CAR XHN . . . G 2 16.78 -7.982 -16.954 1 46.12 ? CAR XHN 501 C 1 
HETATM 35 C CAN XHN . . . G 2 15.57 -10.026 -16.562 1 49.06 ? CAN XHN 501 C 1 
HETATM 36 C CAO XHN . . . G 2 14.396 -10.762 -16.389 1 47.93 ? CAO XHN 501 C 1 
HETATM 37 F FAT XHN . . . G 2 14.472 -12.333 -16.082 1 48.69 ? FAT XHN 501 C 1 
HETATM 38 C CAP XHN . . . G 2 13.176 -10.094 -16.487 1 47.38 ? CAP XHN 501 C 1 
HETATM 39 C CAQ XHN . . . G 2 13.124 -8.708 -16.749 1 47.7 ? CAQ XHN 501 C 1 
HETATM 40 C CAS XHN . . . G 2 11.869 -8.052 -16.839 1 50.12 ? CAS XHN 501 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           40 
#