data_8WYT # _model_server_result.job_id OTaRV0UMq6UqbV0wTsA6Hw _model_server_result.datetime_utc '2024-10-18 21:26:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wyt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 8WYT # _exptl.entry_id 8WYT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 235.365 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(aminomethyl)-3,5-ditert-butyl-phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WYT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WYT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 129 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc2 A NE2 HIS 98 A HIS 133 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc3 A OE1 GLU 208 A GLU 243 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc4 A OE2 GLU 208 A GLU 243 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? # _chem_comp.formula 'C15 H25 N O' _chem_comp.formula_weight 235.365 _chem_comp.id H8F _chem_comp.mon_nstd_flag . _chem_comp.name 2-(aminomethyl)-3,5-ditert-butyl-phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C01 H8F sing 129 n n N01 C15 H8F sing 130 n n C15 C06 H8F sing 131 n n C01 C06 H8F doub 132 n y C01 C02 H8F sing 133 n y C06 C05 H8F sing 134 n y C02 C03 H8F doub 135 n y C05 C07 H8F sing 136 n n C05 C04 H8F doub 137 n y C10 C07 H8F sing 138 n n C03 C04 H8F sing 139 n y C03 C11 H8F sing 140 n n C13 C11 H8F sing 141 n n C09 C07 H8F sing 142 n n C07 C08 H8F sing 143 n n C11 C14 H8F sing 144 n n C11 C12 H8F sing 145 n n C15 H1 H8F sing 146 n n C15 H2 H8F sing 147 n n C14 H3 H8F sing 148 n n C14 H4 H8F sing 149 n n C14 H5 H8F sing 150 n n C12 H6 H8F sing 151 n n C12 H7 H8F sing 152 n n C12 H8 H8F sing 153 n n C10 H9 H8F sing 154 n n C10 H10 H8F sing 155 n n C10 H11 H8F sing 156 n n C09 H12 H8F sing 157 n n C09 H13 H8F sing 158 n n C09 H14 H8F sing 159 n n C02 H15 H8F sing 160 n n C04 H16 H8F sing 161 n n C08 H17 H8F sing 162 n n C08 H18 H8F sing 163 n n C08 H19 H8F sing 164 n n C13 H20 H8F sing 165 n n C13 H21 H8F sing 166 n n C13 H22 H8F sing 167 n n N01 H23 H8F sing 168 n n N01 H24 H8F sing 169 n n O01 H26 H8F sing 170 n n # _atom_sites.entry_id 8WYT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 H8F A 1 1201 1201 H8F H8F . C 3 ZN A 1 1202 1 ZN ZN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 H8F . . . B 2 89.998 75.032 66.123 1 88.96 ? C15 H8F 1201 A 1 HETATM 2 C C14 H8F . . . B 2 92.151 69.881 69.751 1 69.77 ? C14 H8F 1201 A 1 HETATM 3 C C12 H8F . . . B 2 89.896 70.382 70.837 1 69.31 ? C12 H8F 1201 A 1 HETATM 4 C C10 H8F . . . B 2 92.407 75.804 68.388 1 78.81 ? C10 H8F 1201 A 1 HETATM 5 C C09 H8F . . . B 2 90.126 76.209 69.298 1 86.08 ? C09 H8F 1201 A 1 HETATM 6 C C02 H8F . . . B 2 89.921 71.38 67.335 1 80.23 ? C02 H8F 1201 A 1 HETATM 7 C C03 H8F . . . B 2 90.463 71.451 68.628 1 76.54 ? C03 H8F 1201 A 1 HETATM 8 C C04 H8F . . . B 2 90.863 72.674 69.14 1 76.73 ? C04 H8F 1201 A 1 HETATM 9 C C06 H8F . . . B 2 90.197 73.796 67.082 1 86.95 ? C06 H8F 1201 A 1 HETATM 10 C C07 H8F . . . B 2 91.245 75.189 69.105 1 82.27 ? C07 H8F 1201 A 1 HETATM 11 C C01 H8F . . . B 2 89.793 72.554 66.572 1 86.48 ? C01 H8F 1201 A 1 HETATM 12 C C05 H8F . . . B 2 90.742 73.871 68.384 1 83.4 ? C05 H8F 1201 A 1 HETATM 13 C C08 H8F . . . B 2 91.758 74.772 70.554 1 68.72 ? C08 H8F 1201 A 1 HETATM 14 C C11 H8F . . . B 2 90.615 70.168 69.49 1 71.98 ? C11 H8F 1201 A 1 HETATM 15 C C13 H8F . . . B 2 89.988 68.988 68.767 1 69.65 ? C13 H8F 1201 A 1 HETATM 16 N N01 H8F . . . B 2 88.579 75.41 66.08 1 99.13 ? N01 H8F 1201 A 1 HETATM 17 O O01 H8F . . . B 2 89.261 72.484 65.298 1 95.08 ? O01 H8F 1201 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 17 #