data_8WZP # _model_server_result.job_id ZcWjvI1mLFPsEaHHxDOLQA _model_server_result.datetime_utc '2024-11-23 08:25:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wzp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8WZP # _exptl.entry_id 8WZP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.9 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(benzotriazol-1-yl)-~{N}-[(3-chlorophenyl)methyl]-~{N}-[4-(1~{H}-imidazol-5-yl)phenyl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.781 _cell.angle_gamma 90 _cell.entry_id 8WZP _cell.length_a 55.149 _cell.length_b 97.96 _cell.length_c 58.502 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WZP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H19 Cl N6 O' _chem_comp.formula_weight 442.9 _chem_comp.id XIU _chem_comp.mon_nstd_flag . _chem_comp.name 2-(benzotriazol-1-yl)-~{N}-[(3-chlorophenyl)methyl]-~{N}-[4-(1~{H}-imidazol-5-yl)phenyl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms CCF0058981 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 XIU doub 376 n y C02 C03 XIU sing 377 n y C03 C04 XIU doub 378 n y C04 C05 XIU sing 379 n y C05 C06 XIU doub 380 n y C06 C01 XIU sing 381 n y C03 N07 XIU sing 382 n y N07 N25 XIU sing 383 n y N25 N08 XIU doub 384 n y N08 C04 XIU sing 385 n y N07 C09 XIU sing 386 n n C09 C10 XIU sing 387 n n C10 O11 XIU doub 388 n n C10 N12 XIU sing 389 n n N12 C13 XIU sing 390 n n N12 C14 XIU sing 391 n n C14 C15 XIU doub 392 n y C15 C16 XIU sing 393 n y C16 C17 XIU doub 394 n y C17 C18 XIU sing 395 n y C18 C19 XIU doub 396 n y C19 C14 XIU sing 397 n y C17 C20 XIU sing 398 n n C20 N21 XIU sing 399 n y N21 C22 XIU sing 400 n y C22 N23 XIU doub 401 n y N23 C24 XIU sing 402 n y C24 C20 XIU doub 403 n y C13 C26 XIU sing 404 n n C26 C27 XIU doub 405 n y C27 C28 XIU sing 406 n y C28 C29 XIU doub 407 n y C29 C30 XIU sing 408 n y C30 C31 XIU doub 409 n y C31 C26 XIU sing 410 n y C30 CL32 XIU sing 411 n n C13 H132 XIU sing 412 n n C13 H131 XIU sing 413 n n C15 H151 XIU sing 414 n n C22 H221 XIU sing 415 n n C24 H241 XIU sing 416 n n C28 H281 XIU sing 417 n n C01 H011 XIU sing 418 n n C02 H021 XIU sing 419 n n C05 H051 XIU sing 420 n n C06 H061 XIU sing 421 n n C09 H091 XIU sing 422 n n C09 H092 XIU sing 423 n n C16 H161 XIU sing 424 n n C18 H181 XIU sing 425 n n C19 H191 XIU sing 426 n n C27 H271 XIU sing 427 n n C29 H291 XIU sing 428 n n C31 H311 XIU sing 429 n n N21 H1 XIU sing 430 n n # _atom_sites.entry_id 8WZP _atom_sites.fract_transf_matrix[1][1] 0.018133 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005815 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017951 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XIU B 1 401 1 XIU LIG . D 3 HOH A 1 401 105 HOH HOH . D 3 HOH A 2 402 123 HOH HOH . D 3 HOH A 3 403 124 HOH HOH . D 3 HOH A 4 404 67 HOH HOH . D 3 HOH A 5 405 84 HOH HOH . D 3 HOH A 6 406 122 HOH HOH . D 3 HOH A 7 407 158 HOH HOH . D 3 HOH A 8 408 87 HOH HOH . D 3 HOH A 9 409 16 HOH HOH . D 3 HOH A 10 410 41 HOH HOH . D 3 HOH A 11 411 76 HOH HOH . D 3 HOH A 12 412 5 HOH HOH . D 3 HOH A 13 413 133 HOH HOH . D 3 HOH A 14 414 96 HOH HOH . D 3 HOH A 15 415 62 HOH HOH . D 3 HOH A 16 416 9 HOH HOH . D 3 HOH A 17 417 47 HOH HOH . D 3 HOH A 18 418 85 HOH HOH . D 3 HOH A 19 419 143 HOH HOH . D 3 HOH A 20 420 34 HOH HOH . D 3 HOH A 21 421 166 HOH HOH . D 3 HOH A 22 422 75 HOH HOH . D 3 HOH A 23 423 81 HOH HOH . D 3 HOH A 24 424 142 HOH HOH . D 3 HOH A 25 425 86 HOH HOH . D 3 HOH A 26 426 24 HOH HOH . D 3 HOH A 27 427 136 HOH HOH . D 3 HOH A 28 428 107 HOH HOH . D 3 HOH A 29 429 2 HOH HOH . D 3 HOH A 30 430 11 HOH HOH . D 3 HOH A 31 431 103 HOH HOH . D 3 HOH A 32 432 3 HOH HOH . D 3 HOH A 33 433 8 HOH HOH . D 3 HOH A 34 434 116 HOH HOH . D 3 HOH A 35 435 167 HOH HOH . D 3 HOH A 36 436 117 HOH HOH . D 3 HOH A 37 437 12 HOH HOH . D 3 HOH A 38 438 29 HOH HOH . D 3 HOH A 39 439 43 HOH HOH . D 3 HOH A 40 440 25 HOH HOH . D 3 HOH A 41 441 74 HOH HOH . D 3 HOH A 42 442 31 HOH HOH . D 3 HOH A 43 443 119 HOH HOH . D 3 HOH A 44 444 165 HOH HOH . D 3 HOH A 45 445 61 HOH HOH . D 3 HOH A 46 446 54 HOH HOH . D 3 HOH A 47 447 56 HOH HOH . D 3 HOH A 48 448 115 HOH HOH . D 3 HOH A 49 449 38 HOH HOH . D 3 HOH A 50 450 18 HOH HOH . D 3 HOH A 51 451 50 HOH HOH . D 3 HOH A 52 452 102 HOH HOH . D 3 HOH A 53 453 126 HOH HOH . D 3 HOH A 54 454 145 HOH HOH . D 3 HOH A 55 455 10 HOH HOH . D 3 HOH A 56 456 71 HOH HOH . D 3 HOH A 57 457 110 HOH HOH . D 3 HOH A 58 458 154 HOH HOH . D 3 HOH A 59 459 144 HOH HOH . D 3 HOH A 60 460 156 HOH HOH . D 3 HOH A 61 461 53 HOH HOH . D 3 HOH A 62 462 13 HOH HOH . D 3 HOH A 63 463 97 HOH HOH . D 3 HOH A 64 464 125 HOH HOH . D 3 HOH A 65 465 127 HOH HOH . D 3 HOH A 66 466 90 HOH HOH . D 3 HOH A 67 467 21 HOH HOH . D 3 HOH A 68 468 130 HOH HOH . D 3 HOH A 69 469 170 HOH HOH . D 3 HOH A 70 470 58 HOH HOH . D 3 HOH A 71 471 94 HOH HOH . D 3 HOH A 72 472 146 HOH HOH . D 3 HOH A 73 473 159 HOH HOH . D 3 HOH A 74 474 152 HOH HOH . D 3 HOH A 75 475 141 HOH HOH . D 3 HOH A 76 476 65 HOH HOH . D 3 HOH A 77 477 162 HOH HOH . D 3 HOH A 78 478 164 HOH HOH . D 3 HOH A 79 479 131 HOH HOH . E 3 HOH B 1 501 44 HOH HOH . E 3 HOH B 2 502 150 HOH HOH . E 3 HOH B 3 503 45 HOH HOH . E 3 HOH B 4 504 70 HOH HOH . E 3 HOH B 5 505 89 HOH HOH . E 3 HOH B 6 506 55 HOH HOH . E 3 HOH B 7 507 163 HOH HOH . E 3 HOH B 8 508 118 HOH HOH . E 3 HOH B 9 509 99 HOH HOH . E 3 HOH B 10 510 37 HOH HOH . E 3 HOH B 11 511 72 HOH HOH . E 3 HOH B 12 512 134 HOH HOH . E 3 HOH B 13 513 138 HOH HOH . E 3 HOH B 14 514 35 HOH HOH . E 3 HOH B 15 515 15 HOH HOH . E 3 HOH B 16 516 137 HOH HOH . E 3 HOH B 17 517 78 HOH HOH . E 3 HOH B 18 518 135 HOH HOH . E 3 HOH B 19 519 100 HOH HOH . E 3 HOH B 20 520 147 HOH HOH . E 3 HOH B 21 521 106 HOH HOH . E 3 HOH B 22 522 17 HOH HOH . E 3 HOH B 23 523 63 HOH HOH . E 3 HOH B 24 524 92 HOH HOH . E 3 HOH B 25 525 1 HOH HOH . E 3 HOH B 26 526 157 HOH HOH . E 3 HOH B 27 527 46 HOH HOH . E 3 HOH B 28 528 98 HOH HOH . E 3 HOH B 29 529 36 HOH HOH . E 3 HOH B 30 530 20 HOH HOH . E 3 HOH B 31 531 51 HOH HOH . E 3 HOH B 32 532 114 HOH HOH . E 3 HOH B 33 533 73 HOH HOH . E 3 HOH B 34 534 121 HOH HOH . E 3 HOH B 35 535 93 HOH HOH . E 3 HOH B 36 536 108 HOH HOH . E 3 HOH B 37 537 101 HOH HOH . E 3 HOH B 38 538 42 HOH HOH . E 3 HOH B 39 539 109 HOH HOH . E 3 HOH B 40 540 48 HOH HOH . E 3 HOH B 41 541 77 HOH HOH . E 3 HOH B 42 542 111 HOH HOH . E 3 HOH B 43 543 19 HOH HOH . E 3 HOH B 44 544 30 HOH HOH . E 3 HOH B 45 545 88 HOH HOH . E 3 HOH B 46 546 40 HOH HOH . E 3 HOH B 47 547 22 HOH HOH . E 3 HOH B 48 548 60 HOH HOH . E 3 HOH B 49 549 33 HOH HOH . E 3 HOH B 50 550 26 HOH HOH . E 3 HOH B 51 551 4 HOH HOH . E 3 HOH B 52 552 128 HOH HOH . E 3 HOH B 53 553 23 HOH HOH . E 3 HOH B 54 554 161 HOH HOH . E 3 HOH B 55 555 120 HOH HOH . E 3 HOH B 56 556 104 HOH HOH . E 3 HOH B 57 557 59 HOH HOH . E 3 HOH B 58 558 140 HOH HOH . E 3 HOH B 59 559 28 HOH HOH . E 3 HOH B 60 560 112 HOH HOH . E 3 HOH B 61 561 14 HOH HOH . E 3 HOH B 62 562 6 HOH HOH . E 3 HOH B 63 563 57 HOH HOH . E 3 HOH B 64 564 49 HOH HOH . E 3 HOH B 65 565 32 HOH HOH . E 3 HOH B 66 566 66 HOH HOH . E 3 HOH B 67 567 80 HOH HOH . E 3 HOH B 68 568 27 HOH HOH . E 3 HOH B 69 569 39 HOH HOH . E 3 HOH B 70 570 83 HOH HOH . E 3 HOH B 71 571 155 HOH HOH . E 3 HOH B 72 572 7 HOH HOH . E 3 HOH B 73 573 91 HOH HOH . E 3 HOH B 74 574 113 HOH HOH . E 3 HOH B 75 575 69 HOH HOH . E 3 HOH B 76 576 79 HOH HOH . E 3 HOH B 77 577 95 HOH HOH . E 3 HOH B 78 578 149 HOH HOH . E 3 HOH B 79 579 148 HOH HOH . E 3 HOH B 80 580 68 HOH HOH . E 3 HOH B 81 581 64 HOH HOH . E 3 HOH B 82 582 132 HOH HOH . E 3 HOH B 83 583 129 HOH HOH . E 3 HOH B 84 584 139 HOH HOH . E 3 HOH B 85 585 82 HOH HOH . E 3 HOH B 86 586 169 HOH HOH . E 3 HOH B 87 587 52 HOH HOH . E 3 HOH B 88 588 168 HOH HOH . E 3 HOH B 89 589 153 HOH HOH . E 3 HOH B 90 590 151 HOH HOH . E 3 HOH B 91 591 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 XIU . . . C 2 9.588 17.22 26.925 1 33.13 ? C10 XIU 401 B 1 HETATM 2 N N12 XIU . . . C 2 10.521 17.929 27.773 1 35.68 ? N12 XIU 401 B 1 HETATM 3 C C13 XIU . . . C 2 11.06 19.221 27.33 1 31.05 ? C13 XIU 401 B 1 HETATM 4 C C15 XIU . . . C 2 10.842 18.162 30.168 1 35.52 ? C15 XIU 401 B 1 HETATM 5 C C17 XIU . . . C 2 12.052 16.498 31.399 1 36.09 ? C17 XIU 401 B 1 HETATM 6 C C20 XIU . . . C 2 12.659 16.069 32.732 1 33.59 ? C20 XIU 401 B 1 HETATM 7 C C22 XIU . . . C 2 13.791 15.055 34.218 1 34.7 ? C22 XIU 401 B 1 HETATM 8 C C24 XIU . . . C 2 12.585 16.812 33.902 1 32.09 ? C24 XIU 401 B 1 HETATM 9 C C26 XIU . . . C 2 12.306 18.962 26.472 1 33.99 ? C26 XIU 401 B 1 HETATM 10 C C28 XIU . . . C 2 13.595 19.229 24.457 1 35.36 ? C28 XIU 401 B 1 HETATM 11 C C01 XIU . . . C 2 4.91 17.948 26.837 1 37.08 ? C01 XIU 401 B 1 HETATM 12 C C02 XIU . . . C 2 6.192 17.457 27.14 1 38.01 ? C02 XIU 401 B 1 HETATM 13 C C03 XIU . . . C 2 6.687 16.318 26.459 1 34.56 ? C03 XIU 401 B 1 HETATM 14 C C04 XIU . . . C 2 5.895 15.683 25.473 1 34.63 ? C04 XIU 401 B 1 HETATM 15 C C05 XIU . . . C 2 4.606 16.171 25.179 1 35.53 ? C05 XIU 401 B 1 HETATM 16 C C06 XIU . . . C 2 4.119 17.295 25.859 1 37.29 ? C06 XIU 401 B 1 HETATM 17 C C09 XIU . . . C 2 9.007 15.873 27.352 1 33.48 ? C09 XIU 401 B 1 HETATM 18 C C14 XIU . . . C 2 11.022 17.405 29.025 1 34.64 ? C14 XIU 401 B 1 HETATM 19 C C16 XIU . . . C 2 11.369 17.703 31.361 1 37.62 ? C16 XIU 401 B 1 HETATM 20 C C18 XIU . . . C 2 12.271 15.759 30.25 1 33.94 ? C18 XIU 401 B 1 HETATM 21 C C19 XIU . . . C 2 11.746 16.213 29.055 1 35.12 ? C19 XIU 401 B 1 HETATM 22 C C27 XIU . . . C 2 12.447 19.497 25.198 1 31.86 ? C27 XIU 401 B 1 HETATM 23 C C29 XIU . . . C 2 14.593 18.414 24.969 1 32.57 ? C29 XIU 401 B 1 HETATM 24 C C30 XIU . . . C 2 14.432 17.88 26.238 1 32.92 ? C30 XIU 401 B 1 HETATM 25 C C31 XIU . . . C 2 13.308 18.153 26.986 1 34.88 ? C31 XIU 401 B 1 HETATM 26 N N07 XIU . . . C 2 7.864 15.604 26.502 1 33.25 ? N07 XIU 401 B 1 HETATM 27 N N08 XIU . . . C 2 6.644 14.629 25.001 1 32.87 ? N08 XIU 401 B 1 HETATM 28 N N21 XIU . . . C 2 13.425 15.008 32.945 1 40.08 ? N21 XIU 401 B 1 HETATM 29 N N23 XIU . . . C 2 13.284 16.135 34.797 1 37.75 ? N23 XIU 401 B 1 HETATM 30 N N25 XIU . . . C 2 7.808 14.623 25.626 1 32.14 ? N25 XIU 401 B 1 HETATM 31 O O11 XIU . . . C 2 9.257 17.721 25.904 1 32.76 ? O11 XIU 401 B 1 HETATM 32 CL CL32 XIU . . . C 2 15.659 16.829 26.973 1 44.43 ? CL32 XIU 401 B 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 32 #