data_8X0D # _model_server_result.job_id 3CiK1ku0dIPFDDlD8FvQdg _model_server_result.datetime_utc '2024-11-07 04:33:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x0d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 8X0D # _exptl.entry_id 8X0D _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 189.126 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8X0D _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X0D _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 37 A CYS 57 1_555 A SG CYS 79 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 A SG CYS 221 A CYS 241 1_555 A SG CYS 510 A CYS 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 256 A CYS 276 1_555 A SG CYS 258 A CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 A SG CYS 345 A CYS 365 1_555 A SG CYS 361 A CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf5 A SG CYS 399 A CYS 419 1_555 A SG CYS 406 A CYS 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 491 A CYS 511 1_555 A SG CYS 511 A CYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf7 A SG CYS 495 A CYS 515 1_555 A SG CYS 514 A CYS 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 A SG CYS 517 A CYS 537 1_555 A SG CYS 529 A CYS 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 A SG CYS 532 A CYS 552 1_555 A SG CYS 545 A CYS 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf10 A SG CYS 624 A CYS 644 1_555 A SG CYS 713 A CYS 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf11 B SG CYS 37 B CYS 57 1_555 B SG CYS 79 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf12 B SG CYS 221 B CYS 241 1_555 B SG CYS 510 B CYS 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf13 B SG CYS 256 B CYS 276 1_555 B SG CYS 258 B CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf14 B SG CYS 345 B CYS 365 1_555 B SG CYS 361 B CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf15 B SG CYS 399 B CYS 419 1_555 B SG CYS 406 B CYS 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf16 B SG CYS 491 B CYS 511 1_555 B SG CYS 511 B CYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf17 B SG CYS 495 B CYS 515 1_555 B SG CYS 514 B CYS 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf18 B SG CYS 517 B CYS 537 1_555 B SG CYS 529 B CYS 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf19 B SG CYS 532 B CYS 552 1_555 B SG CYS 545 B CYS 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf20 B SG CYS 624 B CYS 644 1_555 B SG CYS 713 B CYS 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? covale ? covale1 A ND2 ASN 190 A ASN 210 1_555 C C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale2 B ND2 ASN 190 B ASN 210 1_555 F C1 NAG . B NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? # _chem_comp.formula 'C5 H7 N3 O5' _chem_comp.formula_weight 189.126 _chem_comp.id QUS _chem_comp.mon_nstd_flag . _chem_comp.name '(S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms QUISQUALATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 QUS sing 305 n n C01 O16 QUS doub 306 n n C01 O17 QUS sing 307 n n C02 C03 QUS sing 308 n n C02 NP3 QUS sing 309 n n C02 H02 QUS sing 310 n n C03 N14 QUS sing 311 n n C03 H031 QUS sing 312 n n C03 H032 QUS sing 313 n n C04 N14 QUS sing 314 n y C04 N15 QUS sing 315 n y C04 O18 QUS doub 316 n n C05 N15 QUS sing 317 n y C05 O19 QUS doub 318 n n C05 O20 QUS sing 319 n y NP3 HP31 QUS sing 320 n n NP3 HP32 QUS sing 321 n n N14 O20 QUS sing 322 n y N15 H15 QUS sing 323 n n O17 H17 QUS sing 324 n n # _atom_sites.entry_id 8X0D _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 901 901 NAG NAG . D 3 QUS A 1 902 902 QUS QUS . E 4 XQT A 1 903 903 XQT XQT . F 2 NAG B 1 901 901 NAG NAG . G 3 QUS B 1 902 902 QUS QUS . H 4 XQT B 1 903 903 XQT XQT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 QUS . . . D 3 128.185 144.312 74.538 1 33.52 ? C01 QUS 902 A 1 HETATM 2 C C02 QUS . . . D 3 128.343 145.739 75.07 1 34.63 ? C02 QUS 902 A 1 HETATM 3 C C03 QUS . . . D 3 127.845 146.759 74.04 1 35.46 ? C03 QUS 902 A 1 HETATM 4 C C04 QUS . . . D 3 125.821 148.268 74.148 1 37.92 ? C04 QUS 902 A 1 HETATM 5 C C05 QUS . . . D 3 124.267 146.796 74.681 1 37.1 ? C05 QUS 902 A 1 HETATM 6 N NP3 QUS . . . D 3 129.768 145.997 75.406 1 35.14 ? NP3 QUS 902 A 1 HETATM 7 N N14 QUS . . . D 3 126.439 147.082 74.233 1 36.56 ? N14 QUS 902 A 1 HETATM 8 N N15 QUS . . . D 3 124.489 148.091 74.416 1 37.54 ? N15 QUS 902 A 1 HETATM 9 O O16 QUS . . . D 3 127.025 143.927 74.289 1 34.08 ? O16 QUS 902 A 1 HETATM 10 O O17 QUS . . . D 3 129.223 143.646 74.385 1 32.33 ? O17 QUS 902 A 1 HETATM 11 O O18 QUS . . . D 3 126.362 149.325 73.876 1 39.11 ? O18 QUS 902 A 1 HETATM 12 O O19 QUS . . . D 3 123.239 146.235 74.959 1 37.43 ? O19 QUS 902 A 1 HETATM 13 O O20 QUS . . . D 3 125.451 146.123 74.581 1 36.63 ? O20 QUS 902 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #