data_8X3U # _model_server_result.job_id vuvRzjjj4L6plVLZV3i2Sw _model_server_result.datetime_utc '2024-10-25 10:22:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x3u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 8X3U # _exptl.entry_id 8X3U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.161 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "URIDINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8X3U _cell.length_a 156.135 _cell.length_b 156.135 _cell.length_c 187.561 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X3U _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I,M 1 1 D,H,L,P 1 2 B,F,J,N 2 1 C,G,K,O 2 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 y,-x+y,z+1/6 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 31.260167 3 'crystal symmetry operation' 6_544 x-y,x-1,z-1/6 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 78.0675 -135.216876 -31.260167 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GLC FRU C1 O1 . O2 HO2 . sing 2 ? 2 3 2 GLC GLC C1 O1 . O2 HO2 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n E FRU 1 E 1 FRU B 501 LIG 2 n E GLC 2 E 2 GLC B 501 LIG 2 n E GLC 3 E 3 GLC B 501 LIG 2 n F FRU 1 F 1 FRU A 501 LIG 2 n F GLC 2 F 2 GLC A 501 LIG 2 n F GLC 3 F 3 GLC A 501 LIG 2 n G FRU 1 G 1 FRU C 501 LIG 2 n G GLC 2 G 2 GLC C 501 LIG 2 n G GLC 3 G 3 GLC C 501 LIG 2 n H FRU 1 H 1 FRU D 501 LIG 2 n H GLC 2 H 2 GLC D 501 LIG 2 n H GLC 3 H 3 GLC D 501 LIG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E O2 FRU . E FRU 1 1_555 E C1 GLC . E GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 ? covale ? covale2 E O2 GLC . E GLC 2 1_555 E C1 GLC . E GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 ? covale ? covale3 F O2 FRU . F FRU 1 1_555 F C1 GLC . F GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 ? covale ? covale4 F O2 GLC . F GLC 2 1_555 F C1 GLC . F GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.421 ? covale ? covale5 G O2 FRU . G FRU 1 1_555 G C1 GLC . G GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? covale ? covale6 G O2 GLC . G GLC 2 1_555 G C1 GLC . G GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? covale ? covale7 H O2 FRU . H FRU 1 1_555 H C1 GLC . H GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 ? covale ? covale8 H O2 GLC . H GLC 2 1_555 H C1 GLC . H GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? # _chem_comp.formula 'C9 H14 N2 O12 P2' _chem_comp.formula_weight 404.161 _chem_comp.id UDP _chem_comp.mon_nstd_flag . _chem_comp.name "URIDINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UDP sing 406 n n N1 C6 UDP sing 407 n n N1 C1' UDP sing 408 n n C2 N3 UDP sing 409 n n C2 O2 UDP doub 410 n n N3 C4 UDP sing 411 n n N3 HN3 UDP sing 412 n n C4 C5 UDP sing 413 n n C4 O4 UDP doub 414 n n C5 C6 UDP doub 415 n n C5 H5 UDP sing 416 n n C6 H6 UDP sing 417 n n C1' C2' UDP sing 418 n n C1' O4' UDP sing 419 n n C1' H1' UDP sing 420 n n C2' O2' UDP sing 421 n n C2' C3' UDP sing 422 n n C2' H2' UDP sing 423 n n O2' HO2' UDP sing 424 n n C3' C4' UDP sing 425 n n C3' O3' UDP sing 426 n n C3' H3' UDP sing 427 n n C4' O4' UDP sing 428 n n C4' C5' UDP sing 429 n n C4' H4' UDP sing 430 n n O3' HO3' UDP sing 431 n n C5' O5' UDP sing 432 n n C5' "H5'1" UDP sing 433 n n C5' "H5'2" UDP sing 434 n n O5' PA UDP sing 435 n n PA O1A UDP doub 436 n n PA O2A UDP sing 437 n n PA O3A UDP sing 438 n n O2A HOA2 UDP sing 439 n n O3A PB UDP sing 440 n n PB O1B UDP doub 441 n n PB O2B UDP sing 442 n n PB O3B UDP sing 443 n n O2B HOB2 UDP sing 444 n n O3B HOB3 UDP sing 445 n n # _atom_sites.entry_id 8X3U _atom_sites.fract_transf_matrix[1][1] 0.006405 _atom_sites.fract_transf_matrix[1][2] 0.003698 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007396 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005332 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 UDP B 1 401 402 UDP B4H . J 3 UDP A 1 401 402 UDP B4H . K 3 UDP C 1 401 402 UDP B4H . L 3 UDP D 1 401 402 UDP B4H . M 4 HOH B 1 501 147 HOH HOH . M 4 HOH B 2 502 60 HOH HOH . M 4 HOH B 3 503 109 HOH HOH . M 4 HOH B 4 504 187 HOH HOH . M 4 HOH B 5 505 233 HOH HOH . M 4 HOH B 6 506 27 HOH HOH . M 4 HOH B 7 507 40 HOH HOH . M 4 HOH B 8 508 16 HOH HOH . M 4 HOH B 9 509 54 HOH HOH . M 4 HOH B 10 510 216 HOH HOH . M 4 HOH B 11 511 78 HOH HOH . M 4 HOH B 12 512 223 HOH HOH . M 4 HOH B 13 513 102 HOH HOH . M 4 HOH B 14 514 48 HOH HOH . M 4 HOH B 15 515 130 HOH HOH . M 4 HOH B 16 516 43 HOH HOH . M 4 HOH B 17 517 123 HOH HOH . M 4 HOH B 18 518 9 HOH HOH . M 4 HOH B 19 519 114 HOH HOH . M 4 HOH B 20 520 81 HOH HOH . M 4 HOH B 21 521 193 HOH HOH . M 4 HOH B 22 522 128 HOH HOH . M 4 HOH B 23 523 68 HOH HOH . M 4 HOH B 24 524 17 HOH HOH . M 4 HOH B 25 525 138 HOH HOH . M 4 HOH B 26 526 145 HOH HOH . M 4 HOH B 27 527 49 HOH HOH . M 4 HOH B 28 528 66 HOH HOH . M 4 HOH B 29 529 124 HOH HOH . M 4 HOH B 30 530 146 HOH HOH . M 4 HOH B 31 531 108 HOH HOH . M 4 HOH B 32 532 237 HOH HOH . M 4 HOH B 33 533 104 HOH HOH . M 4 HOH B 34 534 65 HOH HOH . M 4 HOH B 35 535 46 HOH HOH . M 4 HOH B 36 536 58 HOH HOH . M 4 HOH B 37 537 220 HOH HOH . M 4 HOH B 38 538 163 HOH HOH . M 4 HOH B 39 539 178 HOH HOH . M 4 HOH B 40 540 201 HOH HOH . M 4 HOH B 41 541 120 HOH HOH . M 4 HOH B 42 542 136 HOH HOH . M 4 HOH B 43 543 135 HOH HOH . M 4 HOH B 44 544 218 HOH HOH . M 4 HOH B 45 545 177 HOH HOH . M 4 HOH B 46 546 89 HOH HOH . M 4 HOH B 47 547 160 HOH HOH . M 4 HOH B 48 548 132 HOH HOH . M 4 HOH B 49 549 45 HOH HOH . M 4 HOH B 50 550 101 HOH HOH . M 4 HOH B 51 551 159 HOH HOH . M 4 HOH B 52 552 200 HOH HOH . M 4 HOH B 53 553 154 HOH HOH . M 4 HOH B 54 554 141 HOH HOH . M 4 HOH B 55 555 139 HOH HOH . M 4 HOH B 56 556 122 HOH HOH . M 4 HOH B 57 557 140 HOH HOH . M 4 HOH B 58 558 59 HOH HOH . M 4 HOH B 59 559 151 HOH HOH . M 4 HOH B 60 560 97 HOH HOH . N 4 HOH A 1 501 35 HOH HOH . N 4 HOH A 2 502 202 HOH HOH . N 4 HOH A 3 503 184 HOH HOH . N 4 HOH A 4 504 96 HOH HOH . N 4 HOH A 5 505 30 HOH HOH . N 4 HOH A 6 506 168 HOH HOH . N 4 HOH A 7 507 50 HOH HOH . N 4 HOH A 8 508 3 HOH HOH . N 4 HOH A 9 509 69 HOH HOH . N 4 HOH A 10 510 22 HOH HOH . N 4 HOH A 11 511 92 HOH HOH . N 4 HOH A 12 512 137 HOH HOH . N 4 HOH A 13 513 231 HOH HOH . N 4 HOH A 14 514 105 HOH HOH . N 4 HOH A 15 515 144 HOH HOH . N 4 HOH A 16 516 29 HOH HOH . N 4 HOH A 17 517 39 HOH HOH . N 4 HOH A 18 518 37 HOH HOH . N 4 HOH A 19 519 204 HOH HOH . N 4 HOH A 20 520 116 HOH HOH . N 4 HOH A 21 521 93 HOH HOH . N 4 HOH A 22 522 41 HOH HOH . N 4 HOH A 23 523 131 HOH HOH . N 4 HOH A 24 524 19 HOH HOH . N 4 HOH A 25 525 206 HOH HOH . N 4 HOH A 26 526 72 HOH HOH . N 4 HOH A 27 527 209 HOH HOH . N 4 HOH A 28 528 84 HOH HOH . N 4 HOH A 29 529 79 HOH HOH . N 4 HOH A 30 530 6 HOH HOH . N 4 HOH A 31 531 121 HOH HOH . N 4 HOH A 32 532 83 HOH HOH . N 4 HOH A 33 533 71 HOH HOH . N 4 HOH A 34 534 155 HOH HOH . N 4 HOH A 35 535 194 HOH HOH . N 4 HOH A 36 536 110 HOH HOH . N 4 HOH A 37 537 111 HOH HOH . N 4 HOH A 38 538 74 HOH HOH . N 4 HOH A 39 539 133 HOH HOH . N 4 HOH A 40 540 26 HOH HOH . N 4 HOH A 41 541 167 HOH HOH . N 4 HOH A 42 542 191 HOH HOH . N 4 HOH A 43 543 158 HOH HOH . N 4 HOH A 44 544 129 HOH HOH . N 4 HOH A 45 545 85 HOH HOH . N 4 HOH A 46 546 4 HOH HOH . N 4 HOH A 47 547 87 HOH HOH . N 4 HOH A 48 548 189 HOH HOH . N 4 HOH A 49 549 12 HOH HOH . N 4 HOH A 50 550 15 HOH HOH . N 4 HOH A 51 551 2 HOH HOH . N 4 HOH A 52 552 90 HOH HOH . N 4 HOH A 53 553 98 HOH HOH . N 4 HOH A 54 554 94 HOH HOH . N 4 HOH A 55 555 217 HOH HOH . N 4 HOH A 56 556 188 HOH HOH . N 4 HOH A 57 557 211 HOH HOH . N 4 HOH A 58 558 38 HOH HOH . N 4 HOH A 59 559 61 HOH HOH . O 4 HOH C 1 501 91 HOH HOH . O 4 HOH C 2 502 134 HOH HOH . O 4 HOH C 3 503 119 HOH HOH . O 4 HOH C 4 504 106 HOH HOH . O 4 HOH C 5 505 150 HOH HOH . O 4 HOH C 6 506 198 HOH HOH . O 4 HOH C 7 507 225 HOH HOH . O 4 HOH C 8 508 161 HOH HOH . O 4 HOH C 9 509 75 HOH HOH . O 4 HOH C 10 510 199 HOH HOH . O 4 HOH C 11 511 234 HOH HOH . O 4 HOH C 12 512 21 HOH HOH . O 4 HOH C 13 513 126 HOH HOH . O 4 HOH C 14 514 228 HOH HOH . O 4 HOH C 15 515 76 HOH HOH . O 4 HOH C 16 516 192 HOH HOH . O 4 HOH C 17 517 14 HOH HOH . O 4 HOH C 18 518 57 HOH HOH . O 4 HOH C 19 519 55 HOH HOH . O 4 HOH C 20 520 103 HOH HOH . O 4 HOH C 21 521 20 HOH HOH . O 4 HOH C 22 522 31 HOH HOH . O 4 HOH C 23 523 180 HOH HOH . O 4 HOH C 24 524 221 HOH HOH . O 4 HOH C 25 525 86 HOH HOH . O 4 HOH C 26 526 149 HOH HOH . O 4 HOH C 27 527 142 HOH HOH . O 4 HOH C 28 528 8 HOH HOH . O 4 HOH C 29 529 62 HOH HOH . O 4 HOH C 30 530 70 HOH HOH . O 4 HOH C 31 531 64 HOH HOH . O 4 HOH C 32 532 197 HOH HOH . O 4 HOH C 33 533 117 HOH HOH . O 4 HOH C 34 534 165 HOH HOH . O 4 HOH C 35 535 183 HOH HOH . O 4 HOH C 36 536 127 HOH HOH . O 4 HOH C 37 537 196 HOH HOH . O 4 HOH C 38 538 222 HOH HOH . O 4 HOH C 39 539 156 HOH HOH . O 4 HOH C 40 540 179 HOH HOH . O 4 HOH C 41 541 1 HOH HOH . O 4 HOH C 42 542 88 HOH HOH . O 4 HOH C 43 543 152 HOH HOH . O 4 HOH C 44 544 164 HOH HOH . O 4 HOH C 45 545 176 HOH HOH . O 4 HOH C 46 546 170 HOH HOH . O 4 HOH C 47 547 52 HOH HOH . P 4 HOH D 1 501 143 HOH HOH . P 4 HOH D 2 502 219 HOH HOH . P 4 HOH D 3 503 11 HOH HOH . P 4 HOH D 4 504 47 HOH HOH . P 4 HOH D 5 505 99 HOH HOH . P 4 HOH D 6 506 25 HOH HOH . P 4 HOH D 7 507 7 HOH HOH . P 4 HOH D 8 508 157 HOH HOH . P 4 HOH D 9 509 213 HOH HOH . P 4 HOH D 10 510 34 HOH HOH . P 4 HOH D 11 511 24 HOH HOH . P 4 HOH D 12 512 166 HOH HOH . P 4 HOH D 13 513 100 HOH HOH . P 4 HOH D 14 514 51 HOH HOH . P 4 HOH D 15 515 208 HOH HOH . P 4 HOH D 16 516 227 HOH HOH . P 4 HOH D 17 517 28 HOH HOH . P 4 HOH D 18 518 82 HOH HOH . P 4 HOH D 19 519 42 HOH HOH . P 4 HOH D 20 520 77 HOH HOH . P 4 HOH D 21 521 230 HOH HOH . P 4 HOH D 22 522 182 HOH HOH . P 4 HOH D 23 523 36 HOH HOH . P 4 HOH D 24 524 162 HOH HOH . P 4 HOH D 25 525 10 HOH HOH . P 4 HOH D 26 526 214 HOH HOH . P 4 HOH D 27 527 113 HOH HOH . P 4 HOH D 28 528 44 HOH HOH . P 4 HOH D 29 529 169 HOH HOH . P 4 HOH D 30 530 172 HOH HOH . P 4 HOH D 31 531 174 HOH HOH . P 4 HOH D 32 532 18 HOH HOH . P 4 HOH D 33 533 229 HOH HOH . P 4 HOH D 34 534 190 HOH HOH . P 4 HOH D 35 535 67 HOH HOH . P 4 HOH D 36 536 125 HOH HOH . P 4 HOH D 37 537 23 HOH HOH . P 4 HOH D 38 538 115 HOH HOH . P 4 HOH D 39 539 5 HOH HOH . P 4 HOH D 40 540 13 HOH HOH . P 4 HOH D 41 541 215 HOH HOH . P 4 HOH D 42 542 232 HOH HOH . P 4 HOH D 43 543 175 HOH HOH . P 4 HOH D 44 544 95 HOH HOH . P 4 HOH D 45 545 148 HOH HOH . P 4 HOH D 46 546 118 HOH HOH . P 4 HOH D 47 547 80 HOH HOH . P 4 HOH D 48 548 171 HOH HOH . P 4 HOH D 49 549 153 HOH HOH . P 4 HOH D 50 550 107 HOH HOH . P 4 HOH D 51 551 56 HOH HOH . P 4 HOH D 52 552 236 HOH HOH . P 4 HOH D 53 553 210 HOH HOH . P 4 HOH D 54 554 186 HOH HOH . P 4 HOH D 55 555 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UDP . . . I 3 66.696 -41.335 -19.266 1 44 ? N1 UDP 401 B 1 HETATM 2 C C2 UDP . . . I 3 67.597 -41.21 -18.244 1 48.27 ? C2 UDP 401 B 1 HETATM 3 N N3 UDP . . . I 3 68.319 -42.153 -17.839 1 41.01 ? N3 UDP 401 B 1 HETATM 4 C C4 UDP . . . I 3 68.333 -43.29 -18.289 1 43.08 ? C4 UDP 401 B 1 HETATM 5 C C5 UDP . . . I 3 67.576 -43.703 -19.278 1 42.14 ? C5 UDP 401 B 1 HETATM 6 C C6 UDP . . . I 3 66.712 -42.667 -19.798 1 37.84 ? C6 UDP 401 B 1 HETATM 7 O O2 UDP . . . I 3 67.693 -40.153 -17.713 1 49.68 ? O2 UDP 401 B 1 HETATM 8 O O4 UDP . . . I 3 69.081 -44.065 -17.795 1 44.11 ? O4 UDP 401 B 1 HETATM 9 C C1' UDP . . . I 3 65.889 -40.277 -19.725 1 37.41 ? C1' UDP 401 B 1 HETATM 10 C C2' UDP . . . I 3 66.23 -39.969 -21.132 1 41.78 ? C2' UDP 401 B 1 HETATM 11 O O2' UDP . . . I 3 67.357 -39.049 -21.191 1 40.28 ? O2' UDP 401 B 1 HETATM 12 C C3' UDP . . . I 3 65.038 -39.348 -21.66 1 39.49 ? C3' UDP 401 B 1 HETATM 13 C C4' UDP . . . I 3 63.908 -40.058 -21.015 1 44.17 ? C4' UDP 401 B 1 HETATM 14 O O4' UDP . . . I 3 64.42 -40.632 -19.708 1 39.27 ? O4' UDP 401 B 1 HETATM 15 O O3' UDP . . . I 3 65.023 -37.952 -21.246 1 38.11 ? O3' UDP 401 B 1 HETATM 16 C C5' UDP . . . I 3 63.421 -41.151 -21.898 1 35.98 ? C5' UDP 401 B 1 HETATM 17 O O5' UDP . . . I 3 62.637 -40.627 -22.937 1 43.55 ? O5' UDP 401 B 1 HETATM 18 P PA UDP . . . I 3 62.592 -41.415 -24.39 1 46.25 ? PA UDP 401 B 1 HETATM 19 O O1A UDP . . . I 3 61.671 -40.775 -25.324 1 27.48 ? O1A UDP 401 B 1 HETATM 20 O O2A UDP . . . I 3 63.859 -41.294 -25.108 1 38.9 ? O2A UDP 401 B 1 HETATM 21 O O3A UDP . . . I 3 62.203 -43.002 -24.163 1 42.71 ? O3A UDP 401 B 1 HETATM 22 P PB UDP . . . I 3 60.753 -43.525 -23.576 1 36.88 ? PB UDP 401 B 1 HETATM 23 O O1B UDP . . . I 3 59.946 -44.147 -24.623 1 42.24 ? O1B UDP 401 B 1 HETATM 24 O O2B UDP . . . I 3 59.887 -42.411 -23.192 1 43.37 ? O2B UDP 401 B 1 HETATM 25 O O3B UDP . . . I 3 60.992 -44.567 -22.321 1 48.83 ? O3B UDP 401 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 25 #