data_8X3Z # _model_server_result.job_id S6ou3_JAPuF-FmUCApcinQ _model_server_result.datetime_utc '2024-11-21 10:11:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x3z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":603}' # _entry.id 8X3Z # _exptl.entry_id 8X3Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8X3Z _cell.length_a 58.916 _cell.length_b 129.734 _cell.length_c 220.675 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X3Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 430 B ASP 430 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc2 B OD2 ASP 430 B ASP 430 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc3 B OD1 ASN 457 B ASN 457 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc4 B O ARG 459 B ARG 459 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc5 D O1A TPP . B TPP 601 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 D O1B TPP . B TPP 601 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc7 D O3B TPP . B TPP 601 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8X3Z _atom_sites.fract_transf_matrix[1][1] 0.016973 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004532 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 601 601 ADP ADP . D 3 TPP B 1 601 601 TPP TPP . E 2 ADP B 1 602 701 ADP ADP . F 4 MG B 1 603 801 MG MG . G 5 HOH A 1 701 51 HOH HOH . G 5 HOH A 2 702 79 HOH HOH . G 5 HOH A 3 703 119 HOH HOH . G 5 HOH A 4 704 50 HOH HOH . G 5 HOH A 5 705 86 HOH HOH . G 5 HOH A 6 706 7 HOH HOH . G 5 HOH A 7 707 27 HOH HOH . G 5 HOH A 8 708 32 HOH HOH . G 5 HOH A 9 709 49 HOH HOH . G 5 HOH A 10 710 8 HOH HOH . G 5 HOH A 11 711 15 HOH HOH . G 5 HOH A 12 712 29 HOH HOH . G 5 HOH A 13 713 75 HOH HOH . G 5 HOH A 14 714 106 HOH HOH . G 5 HOH A 15 715 111 HOH HOH . G 5 HOH A 16 716 11 HOH HOH . G 5 HOH A 17 717 57 HOH HOH . G 5 HOH A 18 718 1 HOH HOH . G 5 HOH A 19 719 96 HOH HOH . G 5 HOH A 20 720 23 HOH HOH . G 5 HOH A 21 721 82 HOH HOH . G 5 HOH A 22 722 62 HOH HOH . G 5 HOH A 23 723 85 HOH HOH . G 5 HOH A 24 724 73 HOH HOH . G 5 HOH A 25 725 26 HOH HOH . G 5 HOH A 26 726 43 HOH HOH . G 5 HOH A 27 727 53 HOH HOH . G 5 HOH A 28 728 66 HOH HOH . G 5 HOH A 29 729 38 HOH HOH . G 5 HOH A 30 730 90 HOH HOH . G 5 HOH A 31 731 77 HOH HOH . G 5 HOH A 32 732 84 HOH HOH . G 5 HOH A 33 733 125 HOH HOH . G 5 HOH A 34 734 116 HOH HOH . G 5 HOH A 35 735 122 HOH HOH . H 5 HOH B 1 701 104 HOH HOH . H 5 HOH B 2 702 59 HOH HOH . H 5 HOH B 3 703 14 HOH HOH . H 5 HOH B 4 704 92 HOH HOH . H 5 HOH B 5 705 46 HOH HOH . H 5 HOH B 6 706 31 HOH HOH . H 5 HOH B 7 707 4 HOH HOH . H 5 HOH B 8 708 118 HOH HOH . H 5 HOH B 9 709 10 HOH HOH . H 5 HOH B 10 710 121 HOH HOH . H 5 HOH B 11 711 3 HOH HOH . H 5 HOH B 12 712 61 HOH HOH . H 5 HOH B 13 713 54 HOH HOH . H 5 HOH B 14 714 20 HOH HOH . H 5 HOH B 15 715 21 HOH HOH . H 5 HOH B 16 716 72 HOH HOH . H 5 HOH B 17 717 24 HOH HOH . H 5 HOH B 18 718 105 HOH HOH . H 5 HOH B 19 719 6 HOH HOH . H 5 HOH B 20 720 76 HOH HOH . H 5 HOH B 21 721 13 HOH HOH . H 5 HOH B 22 722 16 HOH HOH . H 5 HOH B 23 723 17 HOH HOH . H 5 HOH B 24 724 63 HOH HOH . H 5 HOH B 25 725 34 HOH HOH . H 5 HOH B 26 726 42 HOH HOH . H 5 HOH B 27 727 37 HOH HOH . H 5 HOH B 28 728 28 HOH HOH . H 5 HOH B 29 729 47 HOH HOH . H 5 HOH B 30 730 65 HOH HOH . H 5 HOH B 31 731 56 HOH HOH . H 5 HOH B 32 732 88 HOH HOH . H 5 HOH B 33 733 18 HOH HOH . H 5 HOH B 34 734 112 HOH HOH . H 5 HOH B 35 735 36 HOH HOH . H 5 HOH B 36 736 40 HOH HOH . H 5 HOH B 37 737 22 HOH HOH . H 5 HOH B 38 738 109 HOH HOH . H 5 HOH B 39 739 80 HOH HOH . H 5 HOH B 40 740 117 HOH HOH . H 5 HOH B 41 741 113 HOH HOH . H 5 HOH B 42 742 93 HOH HOH . H 5 HOH B 43 743 89 HOH HOH . H 5 HOH B 44 744 64 HOH HOH . H 5 HOH B 45 745 94 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -4.465 _atom_site.Cartn_y -24.629 _atom_site.Cartn_z 18.526 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 603 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 53 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 647 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #