data_8X4P # _model_server_result.job_id Axw94nTd4p646BMoGtIoiQ _model_server_result.datetime_utc '2024-11-25 11:02:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 8X4P # _exptl.entry_id 8X4P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.28 _cell.angle_gamma 90 _cell.entry_id 8X4P _cell.length_a 119.06 _cell.length_b 79.96 _cell.length_c 85.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,I 1 1 B,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 160 A GLU 160 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc2 A OE1 GLU 188 A GLU 188 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc3 A NE2 HIS 245 A HIS 245 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc4 A ND1 HIS 263 A HIS 263 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc5 D ZN ZN . A ZN 302 1_555 B NE2 HIS 245 B HIS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc6 E ZN ZN . A ZN 303 4_546 B NE2 HIS 286 B HIS 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc7 F ZN ZN . A ZN 304 1_555 B OE1 GLU 160 B GLU 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8X4P _atom_sites.fract_transf_matrix[1][1] 0.008399 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004147 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013058 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 1 ZN ZN . D 2 ZN A 1 302 2 ZN ZN . E 2 ZN A 1 303 3 ZN ZN . F 2 ZN A 1 304 4 ZN ZN . G 3 SFG A 1 305 5 SFG SFG . H 3 SFG B 1 301 6 SFG SFG . I 4 HOH A 1 401 7 HOH HOH . I 4 HOH A 2 402 64 HOH HOH . I 4 HOH A 3 403 17 HOH HOH . I 4 HOH A 4 404 15 HOH HOH . I 4 HOH A 5 405 29 HOH HOH . I 4 HOH A 6 406 3 HOH HOH . I 4 HOH A 7 407 65 HOH HOH . I 4 HOH A 8 408 24 HOH HOH . I 4 HOH A 9 409 31 HOH HOH . I 4 HOH A 10 410 20 HOH HOH . I 4 HOH A 11 411 22 HOH HOH . I 4 HOH A 12 412 35 HOH HOH . I 4 HOH A 13 413 78 HOH HOH . I 4 HOH A 14 414 4 HOH HOH . I 4 HOH A 15 415 76 HOH HOH . I 4 HOH A 16 416 5 HOH HOH . I 4 HOH A 17 417 33 HOH HOH . I 4 HOH A 18 418 34 HOH HOH . I 4 HOH A 19 419 30 HOH HOH . I 4 HOH A 20 420 11 HOH HOH . I 4 HOH A 21 421 6 HOH HOH . I 4 HOH A 22 422 79 HOH HOH . I 4 HOH A 23 423 80 HOH HOH . I 4 HOH A 24 424 8 HOH HOH . I 4 HOH A 25 425 9 HOH HOH . I 4 HOH A 26 426 82 HOH HOH . I 4 HOH A 27 427 67 HOH HOH . I 4 HOH A 28 428 25 HOH HOH . I 4 HOH A 29 429 81 HOH HOH . I 4 HOH A 30 430 27 HOH HOH . I 4 HOH A 31 431 26 HOH HOH . I 4 HOH A 32 432 18 HOH HOH . I 4 HOH A 33 433 1 HOH HOH . I 4 HOH A 34 434 23 HOH HOH . I 4 HOH A 35 435 77 HOH HOH . I 4 HOH A 36 436 2 HOH HOH . I 4 HOH A 37 437 66 HOH HOH . I 4 HOH A 38 438 14 HOH HOH . I 4 HOH A 39 439 21 HOH HOH . I 4 HOH A 40 440 36 HOH HOH . I 4 HOH A 41 441 83 HOH HOH . I 4 HOH A 42 442 72 HOH HOH . I 4 HOH A 43 443 75 HOH HOH . I 4 HOH A 44 444 32 HOH HOH . I 4 HOH A 45 445 73 HOH HOH . I 4 HOH A 46 446 48 HOH HOH . I 4 HOH A 47 447 28 HOH HOH . J 4 HOH B 1 401 85 HOH HOH . J 4 HOH B 2 402 97 HOH HOH . J 4 HOH B 3 403 86 HOH HOH . J 4 HOH B 4 404 40 HOH HOH . J 4 HOH B 5 405 98 HOH HOH . J 4 HOH B 6 406 62 HOH HOH . J 4 HOH B 7 407 55 HOH HOH . J 4 HOH B 8 408 89 HOH HOH . J 4 HOH B 9 409 54 HOH HOH . J 4 HOH B 10 410 37 HOH HOH . J 4 HOH B 11 411 46 HOH HOH . J 4 HOH B 12 412 38 HOH HOH . J 4 HOH B 13 413 51 HOH HOH . J 4 HOH B 14 414 45 HOH HOH . J 4 HOH B 15 415 59 HOH HOH . J 4 HOH B 16 416 100 HOH HOH . J 4 HOH B 17 417 94 HOH HOH . J 4 HOH B 18 418 60 HOH HOH . J 4 HOH B 19 419 90 HOH HOH . J 4 HOH B 20 420 88 HOH HOH . J 4 HOH B 21 421 56 HOH HOH . J 4 HOH B 22 422 53 HOH HOH . J 4 HOH B 23 423 50 HOH HOH . J 4 HOH B 24 424 63 HOH HOH . J 4 HOH B 25 425 70 HOH HOH . J 4 HOH B 26 426 42 HOH HOH . J 4 HOH B 27 427 41 HOH HOH . J 4 HOH B 28 428 74 HOH HOH . J 4 HOH B 29 429 102 HOH HOH . J 4 HOH B 30 430 52 HOH HOH . J 4 HOH B 31 431 92 HOH HOH . J 4 HOH B 32 432 47 HOH HOH . J 4 HOH B 33 433 19 HOH HOH . J 4 HOH B 34 434 12 HOH HOH . J 4 HOH B 35 435 87 HOH HOH . J 4 HOH B 36 436 91 HOH HOH . J 4 HOH B 37 437 39 HOH HOH . J 4 HOH B 38 438 68 HOH HOH . J 4 HOH B 39 439 101 HOH HOH . J 4 HOH B 40 440 43 HOH HOH . J 4 HOH B 41 441 58 HOH HOH . J 4 HOH B 42 442 61 HOH HOH . J 4 HOH B 43 443 71 HOH HOH . J 4 HOH B 44 444 16 HOH HOH . J 4 HOH B 45 445 57 HOH HOH . J 4 HOH B 46 446 44 HOH HOH . J 4 HOH B 47 447 84 HOH HOH . J 4 HOH B 48 448 95 HOH HOH . J 4 HOH B 49 449 93 HOH HOH . J 4 HOH B 50 450 69 HOH HOH . J 4 HOH B 51 451 99 HOH HOH . J 4 HOH B 52 452 13 HOH HOH . J 4 HOH B 53 453 10 HOH HOH . J 4 HOH B 54 454 96 HOH HOH . J 4 HOH B 55 455 49 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 22.492 _atom_site.Cartn_y -22.086 _atom_site.Cartn_z 37.818 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #