data_8X5K
#
_model_server_result.job_id            zjnEtsrnf54zDD7rNPgq5w 
_model_server_result.datetime_utc      '2024-11-25 04:48:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8x5k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":702}' 
#
_entry.id    8X5K 
#
_exptl.entry_id    8X5K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.519 
_cell.angle_gamma         90 
_cell.entry_id            8X5K 
_cell.length_a            38.095 
_cell.length_b            83.903 
_cell.length_c            39.962 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8X5K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 138 n n 
C1 C2 EDO sing 139 n n 
C1 H11 EDO sing 140 n n 
C1 H12 EDO sing 141 n n 
O1 HO1 EDO sing 142 n n 
C2 O2 EDO sing 143 n n 
C2 H21 EDO sing 144 n n 
C2 H22 EDO sing 145 n n 
O2 HO2 EDO sing 146 n n 
#
_atom_sites.entry_id                     8X5K 
_atom_sites.fract_transf_matrix[1][1]    0.02625 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00535 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011919 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025538 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 3YT A 1 701 1 3YT 607 . 
C 3 EDO A 1 702 1 EDO EDO . 
D 4 HOH A 1 801 74 HOH HOH . 
D 4 HOH A 2 802 66 HOH HOH . 
D 4 HOH A 3 803 76 HOH HOH . 
D 4 HOH A 4 804 102 HOH HOH . 
D 4 HOH A 5 805 109 HOH HOH . 
D 4 HOH A 6 806 32 HOH HOH . 
D 4 HOH A 7 807 39 HOH HOH . 
D 4 HOH A 8 808 3 HOH HOH . 
D 4 HOH A 9 809 27 HOH HOH . 
D 4 HOH A 10 810 110 HOH HOH . 
D 4 HOH A 11 811 28 HOH HOH . 
D 4 HOH A 12 812 19 HOH HOH . 
D 4 HOH A 13 813 15 HOH HOH . 
D 4 HOH A 14 814 121 HOH HOH . 
D 4 HOH A 15 815 111 HOH HOH . 
D 4 HOH A 16 816 88 HOH HOH . 
D 4 HOH A 17 817 14 HOH HOH . 
D 4 HOH A 18 818 106 HOH HOH . 
D 4 HOH A 19 819 35 HOH HOH . 
D 4 HOH A 20 820 91 HOH HOH . 
D 4 HOH A 21 821 18 HOH HOH . 
D 4 HOH A 22 822 56 HOH HOH . 
D 4 HOH A 23 823 36 HOH HOH . 
D 4 HOH A 24 824 100 HOH HOH . 
D 4 HOH A 25 825 11 HOH HOH . 
D 4 HOH A 26 826 61 HOH HOH . 
D 4 HOH A 27 827 37 HOH HOH . 
D 4 HOH A 28 828 23 HOH HOH . 
D 4 HOH A 29 829 24 HOH HOH . 
D 4 HOH A 30 830 8 HOH HOH . 
D 4 HOH A 31 831 20 HOH HOH . 
D 4 HOH A 32 832 33 HOH HOH . 
D 4 HOH A 33 833 77 HOH HOH . 
D 4 HOH A 34 834 6 HOH HOH . 
D 4 HOH A 35 835 80 HOH HOH . 
D 4 HOH A 36 836 58 HOH HOH . 
D 4 HOH A 37 837 70 HOH HOH . 
D 4 HOH A 38 838 94 HOH HOH . 
D 4 HOH A 39 839 119 HOH HOH . 
D 4 HOH A 40 840 49 HOH HOH . 
D 4 HOH A 41 841 89 HOH HOH . 
D 4 HOH A 42 842 55 HOH HOH . 
D 4 HOH A 43 843 126 HOH HOH . 
D 4 HOH A 44 844 122 HOH HOH . 
D 4 HOH A 45 845 42 HOH HOH . 
D 4 HOH A 46 846 38 HOH HOH . 
D 4 HOH A 47 847 85 HOH HOH . 
D 4 HOH A 48 848 124 HOH HOH . 
D 4 HOH A 49 849 92 HOH HOH . 
D 4 HOH A 50 850 101 HOH HOH . 
D 4 HOH A 51 851 67 HOH HOH . 
D 4 HOH A 52 852 107 HOH HOH . 
D 4 HOH A 53 853 9 HOH HOH . 
D 4 HOH A 54 854 40 HOH HOH . 
D 4 HOH A 55 855 1 HOH HOH . 
D 4 HOH A 56 856 75 HOH HOH . 
D 4 HOH A 57 857 104 HOH HOH . 
D 4 HOH A 58 858 64 HOH HOH . 
D 4 HOH A 59 859 7 HOH HOH . 
D 4 HOH A 60 860 16 HOH HOH . 
D 4 HOH A 61 861 52 HOH HOH . 
D 4 HOH A 62 862 112 HOH HOH . 
D 4 HOH A 63 863 115 HOH HOH . 
D 4 HOH A 64 864 22 HOH HOH . 
D 4 HOH A 65 865 59 HOH HOH . 
D 4 HOH A 66 866 10 HOH HOH . 
D 4 HOH A 67 867 60 HOH HOH . 
D 4 HOH A 68 868 29 HOH HOH . 
D 4 HOH A 69 869 12 HOH HOH . 
D 4 HOH A 70 870 41 HOH HOH . 
D 4 HOH A 71 871 63 HOH HOH . 
D 4 HOH A 72 872 47 HOH HOH . 
D 4 HOH A 73 873 50 HOH HOH . 
D 4 HOH A 74 874 13 HOH HOH . 
D 4 HOH A 75 875 5 HOH HOH . 
D 4 HOH A 76 876 48 HOH HOH . 
D 4 HOH A 77 877 95 HOH HOH . 
D 4 HOH A 78 878 31 HOH HOH . 
D 4 HOH A 79 879 45 HOH HOH . 
D 4 HOH A 80 880 25 HOH HOH . 
D 4 HOH A 81 881 127 HOH HOH . 
D 4 HOH A 82 882 114 HOH HOH . 
D 4 HOH A 83 883 90 HOH HOH . 
D 4 HOH A 84 884 120 HOH HOH . 
D 4 HOH A 85 885 43 HOH HOH . 
D 4 HOH A 86 886 69 HOH HOH . 
D 4 HOH A 87 887 2 HOH HOH . 
D 4 HOH A 88 888 118 HOH HOH . 
D 4 HOH A 89 889 26 HOH HOH . 
D 4 HOH A 90 890 83 HOH HOH . 
D 4 HOH A 91 891 4 HOH HOH . 
D 4 HOH A 92 892 54 HOH HOH . 
D 4 HOH A 93 893 53 HOH HOH . 
D 4 HOH A 94 894 17 HOH HOH . 
D 4 HOH A 95 895 96 HOH HOH . 
D 4 HOH A 96 896 44 HOH HOH . 
D 4 HOH A 97 897 86 HOH HOH . 
D 4 HOH A 98 898 62 HOH HOH . 
D 4 HOH A 99 899 123 HOH HOH . 
D 4 HOH A 100 900 117 HOH HOH . 
D 4 HOH A 101 901 65 HOH HOH . 
D 4 HOH A 102 902 30 HOH HOH . 
D 4 HOH A 103 903 51 HOH HOH . 
D 4 HOH A 104 904 108 HOH HOH . 
D 4 HOH A 105 905 34 HOH HOH . 
D 4 HOH A 106 906 87 HOH HOH . 
D 4 HOH A 107 907 116 HOH HOH . 
D 4 HOH A 108 908 113 HOH HOH . 
D 4 HOH A 109 909 21 HOH HOH . 
D 4 HOH A 110 910 72 HOH HOH . 
D 4 HOH A 111 911 82 HOH HOH . 
D 4 HOH A 112 912 81 HOH HOH . 
D 4 HOH A 113 913 68 HOH HOH . 
D 4 HOH A 114 914 105 HOH HOH . 
D 4 HOH A 115 915 73 HOH HOH . 
D 4 HOH A 116 916 125 HOH HOH . 
D 4 HOH A 117 917 98 HOH HOH . 
D 4 HOH A 118 918 93 HOH HOH . 
D 4 HOH A 119 919 57 HOH HOH . 
D 4 HOH A 120 920 46 HOH HOH . 
D 4 HOH A 121 921 103 HOH HOH . 
D 4 HOH A 122 922 71 HOH HOH . 
D 4 HOH A 123 923 79 HOH HOH . 
D 4 HOH A 124 924 97 HOH HOH . 
D 4 HOH A 125 925 78 HOH HOH . 
D 4 HOH A 126 926 99 HOH HOH . 
D 4 HOH A 127 927 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 25.449 27.278 11.069 1 42.98 0 C1 EDO 702 A 1 
HETATM 2 O O1 EDO . . . C 3 25.48 27.899 12.342 1 40.33 0 O1 EDO 702 A 1 
HETATM 3 C C2 EDO . . . C 3 25.805 25.839 11.156 1 41.18 0 C2 EDO 702 A 1 
HETATM 4 O O2 EDO . . . C 3 25.007 25.008 10.356 1 43.43 0 O2 EDO 702 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#