data_8X64 # _model_server_result.job_id MtjJo2RAelEF5eJ5C8yElA _model_server_result.datetime_utc '2025-03-05 21:00:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x64 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8X64 # _exptl.entry_id 8X64 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 310.821 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description desloratadine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8X64 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X64 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 89 B CYS 100 1_555 A SG CYS 169 B CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 346 B CYS 441 1_555 A SG CYS 349 B CYS 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C19 H19 Cl N2' _chem_comp.formula_weight 310.821 _chem_comp.id Y5R _chem_comp.mon_nstd_flag . _chem_comp.name desloratadine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 13-chloranyl-2-piperidin-4-ylidene-4-azatricyclo[9.4.0.0^{3,8}]pentadeca-1(11),3(8),4,6,12,14-hexaene # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL01 C02 Y5R sing 374 n n C02 C07 Y5R doub 375 n y C02 C03 Y5R sing 376 n y C07 C06 Y5R sing 377 n y C03 C04 Y5R doub 378 n y C19 C18 Y5R sing 379 n n C19 N20 Y5R sing 380 n n C06 C08 Y5R sing 381 n n C06 C05 Y5R doub 382 n y C18 C17 Y5R sing 383 n n C04 C05 Y5R sing 384 n y N20 C21 Y5R sing 385 n n C08 C09 Y5R sing 386 n n C05 C16 Y5R sing 387 n n C17 C16 Y5R doub 388 n n C17 C22 Y5R sing 389 n n C21 C22 Y5R sing 390 n n C16 C15 Y5R sing 391 n n C09 C10 Y5R sing 392 n n C15 C10 Y5R doub 393 n y C15 N14 Y5R sing 394 n y C10 C11 Y5R sing 395 n y N14 C13 Y5R doub 396 n y C11 C12 Y5R doub 397 n y C13 C12 Y5R sing 398 n y C13 H1 Y5R sing 399 n n C21 H2 Y5R sing 400 n n C21 H3 Y5R sing 401 n n C22 H4 Y5R sing 402 n n C22 H5 Y5R sing 403 n n C03 H6 Y5R sing 404 n n C04 H7 Y5R sing 405 n n C07 H8 Y5R sing 406 n n C08 H9 Y5R sing 407 n n C08 H10 Y5R sing 408 n n C09 H11 Y5R sing 409 n n C09 H12 Y5R sing 410 n n C11 H13 Y5R sing 411 n n C12 H14 Y5R sing 412 n n C18 H15 Y5R sing 413 n n C18 H16 Y5R sing 414 n n C19 H17 Y5R sing 415 n n C19 H18 Y5R sing 416 n n N20 H19 Y5R sing 417 n n # _atom_sites.entry_id 8X64 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id Y5R _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 485 _pdbx_nonpoly_scheme.pdb_mon_id Y5R _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 Y5R . . . B 2 137.692 137.191 175.525 1 81.17 ? C10 Y5R 601 B 1 HETATM 2 C C13 Y5R . . . B 2 136.648 136.15 177.828 1 81.17 ? C13 Y5R 601 B 1 HETATM 3 C C15 Y5R . . . B 2 136.709 136.21 175.488 1 81.17 ? C15 Y5R 601 B 1 HETATM 4 C C17 Y5R . . . B 2 136.055 134.361 173.892 1 81.17 ? C17 Y5R 601 B 1 HETATM 5 C C21 Y5R . . . B 2 137.424 132.238 174.122 1 81.17 ? C21 Y5R 601 B 1 HETATM 6 C C22 Y5R . . . B 2 136.501 133.246 174.804 1 81.17 ? C22 Y5R 601 B 1 HETATM 7 C C02 Y5R . . . B 2 134.838 138.649 171.322 1 81.17 ? C02 Y5R 601 B 1 HETATM 8 C C03 Y5R . . . B 2 133.88 137.846 171.931 1 81.17 ? C03 Y5R 601 B 1 HETATM 9 C C04 Y5R . . . B 2 134.258 136.878 172.849 1 81.17 ? C04 Y5R 601 B 1 HETATM 10 C C05 Y5R . . . B 2 135.633 136.704 173.144 1 81.17 ? C05 Y5R 601 B 1 HETATM 11 C C06 Y5R . . . B 2 136.564 137.485 172.551 1 81.17 ? C06 Y5R 601 B 1 HETATM 12 C C07 Y5R . . . B 2 136.182 138.482 171.619 1 81.17 ? C07 Y5R 601 B 1 HETATM 13 C C08 Y5R . . . B 2 138.036 137.259 172.922 1 81.17 ? C08 Y5R 601 B 1 HETATM 14 C C09 Y5R . . . B 2 138.367 137.857 174.286 1 81.17 ? C09 Y5R 601 B 1 HETATM 15 C C11 Y5R . . . B 2 138.189 137.671 176.763 1 81.17 ? C11 Y5R 601 B 1 HETATM 16 C C12 Y5R . . . B 2 137.645 137.131 177.927 1 81.17 ? C12 Y5R 601 B 1 HETATM 17 C C16 Y5R . . . B 2 136.126 135.657 174.156 1 81.17 ? C16 Y5R 601 B 1 HETATM 18 C C18 Y5R . . . B 2 135.499 133.763 172.624 1 81.17 ? C18 Y5R 601 B 1 HETATM 19 C C19 Y5R . . . B 2 136.434 132.749 171.973 1 81.17 ? C19 Y5R 601 B 1 HETATM 20 N N14 Y5R . . . B 2 136.205 135.727 176.649 1 81.17 ? N14 Y5R 601 B 1 HETATM 21 N N20 Y5R . . . B 2 136.83 131.691 172.902 1 81.17 ? N20 Y5R 601 B 1 HETATM 22 CL CL01 Y5R . . . B 2 134.328 139.895 170.155 1 81.17 ? CL01 Y5R 601 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #