data_8X79
#
_model_server_result.job_id            AfVvq9Z_zVMuv3qIOFpFjQ 
_model_server_result.datetime_utc      '2024-10-26 02:28:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8x79 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8X79 
#
_exptl.entry_id    8X79 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              419.516 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-[4-[(5,6-diphenylpyrazin-2-yl)-propan-2-yl-amino]butoxy]ethanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C25 H29 N3 O3' 
_chem_comp.formula_weight    419.516 
_chem_comp.id                Y9Q 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-[4-[(5,6-diphenylpyrazin-2-yl)-propan-2-yl-amino]butoxy]ethanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C9 Y9Q doub 374 n n 
O2 C9 Y9Q sing 375 n n 
C9 C8 Y9Q sing 376 n n 
C8 O1 Y9Q sing 377 n n 
C7 O1 Y9Q sing 378 n n 
C7 C6 Y9Q sing 379 n n 
C6 C5 Y9Q sing 380 n n 
C5 C4 Y9Q sing 381 n n 
C4 N1 Y9Q sing 382 n n 
C18 C17 Y9Q doub 383 n y 
C18 C19 Y9Q sing 384 n y 
C17 C16 Y9Q sing 385 n y 
C19 C14 Y9Q doub 386 n y 
N1 C2 Y9Q sing 387 n n 
N1 C10 Y9Q sing 388 n n 
C16 C15 Y9Q doub 389 n y 
C2 C3 Y9Q sing 390 n n 
C2 C1 Y9Q sing 391 n n 
N3 C10 Y9Q sing 392 n y 
N3 C13 Y9Q doub 393 n y 
C14 C15 Y9Q sing 394 n y 
C14 C13 Y9Q sing 395 n n 
C10 C11 Y9Q doub 396 n y 
C13 C12 Y9Q sing 397 n y 
C11 N2 Y9Q sing 398 n y 
C12 N2 Y9Q doub 399 n y 
C12 C20 Y9Q sing 400 n n 
C25 C20 Y9Q doub 401 n y 
C25 C24 Y9Q sing 402 n y 
C20 C21 Y9Q sing 403 n y 
C24 C23 Y9Q doub 404 n y 
C21 C22 Y9Q doub 405 n y 
C23 C22 Y9Q sing 406 n y 
C1 H1 Y9Q sing 407 n n 
C1 H2 Y9Q sing 408 n n 
C1 H3 Y9Q sing 409 n n 
C2 H4 Y9Q sing 410 n n 
C3 H5 Y9Q sing 411 n n 
C3 H6 Y9Q sing 412 n n 
C3 H7 Y9Q sing 413 n n 
C4 H8 Y9Q sing 414 n n 
C4 H9 Y9Q sing 415 n n 
C5 H10 Y9Q sing 416 n n 
C5 H11 Y9Q sing 417 n n 
C6 H12 Y9Q sing 418 n n 
C6 H13 Y9Q sing 419 n n 
C7 H14 Y9Q sing 420 n n 
C7 H15 Y9Q sing 421 n n 
C8 H16 Y9Q sing 422 n n 
C8 H17 Y9Q sing 423 n n 
O2 H18 Y9Q sing 424 n n 
C11 H19 Y9Q sing 425 n n 
C15 H20 Y9Q sing 426 n n 
C16 H21 Y9Q sing 427 n n 
C17 H22 Y9Q sing 428 n n 
C18 H23 Y9Q sing 429 n n 
C19 H24 Y9Q sing 430 n n 
C21 H25 Y9Q sing 431 n n 
C22 H26 Y9Q sing 432 n n 
C23 H27 Y9Q sing 433 n n 
C24 H28 Y9Q sing 434 n n 
C25 H29 Y9Q sing 435 n n 
#
_atom_sites.entry_id                     8X79 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           Y9Q 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      401 
_pdbx_nonpoly_scheme.auth_seq_num     401 
_pdbx_nonpoly_scheme.pdb_mon_id       Y9Q 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 Y9Q . . . F 6 96.05 120.336 88.301 1 20 ? C1 Y9Q 401 R 1 
HETATM 2 C C2 Y9Q . . . F 6 97.003 119.383 89 1 20 ? C2 Y9Q 401 R 1 
HETATM 3 C C3 Y9Q . . . F 6 96.532 117.942 88.829 1 20 ? C3 Y9Q 401 R 1 
HETATM 4 C C4 Y9Q . . . F 6 98.602 119.421 87.076 1 20 ? C4 Y9Q 401 R 1 
HETATM 5 C C5 Y9Q . . . F 6 98.935 117.956 86.822 1 20 ? C5 Y9Q 401 R 1 
HETATM 6 C C6 Y9Q . . . F 6 100.026 117.841 85.786 1 20 ? C6 Y9Q 401 R 1 
HETATM 7 N N1 Y9Q . . . F 6 98.365 119.476 88.498 1 20 ? N1 Y9Q 401 R 1 
HETATM 8 C C7 Y9Q . . . F 6 99.59 118.641 84.586 1 20 ? C7 Y9Q 401 R 1 
HETATM 9 O O1 Y9Q . . . F 6 98.206 118.57 84.442 1 20 ? O1 Y9Q 401 R 1 
HETATM 10 C C8 Y9Q . . . F 6 97.664 119.464 83.516 1 20 ? C8 Y9Q 401 R 1 
HETATM 11 C C9 Y9Q . . . F 6 96.7 118.654 82.654 1 20 ? C9 Y9Q 401 R 1 
HETATM 12 O O2 Y9Q . . . F 6 96.912 117.427 82.514 1 20 ? O2 Y9Q 401 R 1 
HETATM 13 O O3 Y9Q . . . F 6 95.694 119.172 82.098 1 20 -1 O3 Y9Q 401 R 1 
HETATM 14 C C10 Y9Q . . . F 6 99.556 119.485 89.333 1 20 ? C10 Y9Q 401 R 1 
HETATM 15 C C11 Y9Q . . . F 6 99.541 119.503 90.706 1 20 ? C11 Y9Q 401 R 1 
HETATM 16 N N2 Y9Q . . . F 6 100.663 119.489 91.388 1 20 ? N2 Y9Q 401 R 1 
HETATM 17 C C12 Y9Q . . . F 6 101.804 119.442 90.753 1 20 ? C12 Y9Q 401 R 1 
HETATM 18 C C13 Y9Q . . . F 6 101.836 119.402 89.38 1 20 ? C13 Y9Q 401 R 1 
HETATM 19 N N3 Y9Q . . . F 6 100.712 119.42 88.722 1 20 ? N3 Y9Q 401 R 1 
HETATM 20 C C14 Y9Q . . . F 6 103.121 119.336 88.577 1 20 ? C14 Y9Q 401 R 1 
HETATM 21 C C15 Y9Q . . . F 6 103.258 118.331 87.661 1 20 ? C15 Y9Q 401 R 1 
HETATM 22 C C16 Y9Q . . . F 6 104.404 118.231 86.915 1 20 ? C16 Y9Q 401 R 1 
HETATM 23 C C17 Y9Q . . . F 6 105.417 119.141 87.081 1 20 ? C17 Y9Q 401 R 1 
HETATM 24 C C18 Y9Q . . . F 6 105.279 120.147 88.01 1 20 ? C18 Y9Q 401 R 1 
HETATM 25 C C19 Y9Q . . . F 6 104.13 120.247 88.753 1 20 ? C19 Y9Q 401 R 1 
HETATM 26 C C20 Y9Q . . . F 6 103.07 119.399 91.577 1 20 ? C20 Y9Q 401 R 1 
HETATM 27 C C21 Y9Q . . . F 6 104.042 118.474 91.25 1 20 ? C21 Y9Q 401 R 1 
HETATM 28 C C22 Y9Q . . . F 6 105.194 118.406 91.983 1 20 ? C22 Y9Q 401 R 1 
HETATM 29 C C23 Y9Q . . . F 6 105.351 119.247 93.05 1 20 ? C23 Y9Q 401 R 1 
HETATM 30 C C24 Y9Q . . . F 6 104.379 120.16 93.396 1 20 ? C24 Y9Q 401 R 1 
HETATM 31 C C25 Y9Q . . . F 6 103.224 120.238 92.654 1 20 ? C25 Y9Q 401 R 1 
HETATM 32 H H1 Y9Q . . . F 6 96.365 121.361 88.47 1 20 ? H1 Y9Q 401 R 1 
HETATM 33 H H2 Y9Q . . . F 6 95.069 120.163 88.731 1 20 ? H2 Y9Q 401 R 1 
HETATM 34 H H3 Y9Q . . . F 6 95.978 120.138 87.239 1 20 ? H3 Y9Q 401 R 1 
HETATM 35 H H4 Y9Q . . . F 6 96.973 119.626 90.051 1 20 ? H4 Y9Q 401 R 1 
HETATM 36 H H5 Y9Q . . . F 6 97.357 117.267 89.042 1 20 ? H5 Y9Q 401 R 1 
HETATM 37 H H6 Y9Q . . . F 6 96.203 117.801 87.805 1 20 ? H6 Y9Q 401 R 1 
HETATM 38 H H7 Y9Q . . . F 6 95.706 117.744 89.506 1 20 ? H7 Y9Q 401 R 1 
HETATM 39 H H8 Y9Q . . . F 6 97.738 119.705 86.501 1 20 ? H8 Y9Q 401 R 1 
HETATM 40 H H9 Y9Q . . . F 6 99.433 120.059 86.805 1 20 ? H9 Y9Q 401 R 1 
HETATM 41 H H10 Y9Q . . . F 6 98.046 117.424 86.501 1 20 ? H10 Y9Q 401 R 1 
HETATM 42 H H11 Y9Q . . . F 6 99.278 117.5 87.739 1 20 ? H11 Y9Q 401 R 1 
HETATM 43 H H12 Y9Q . . . F 6 100.179 116.802 85.514 1 20 ? H12 Y9Q 401 R 1 
HETATM 44 H H13 Y9Q . . . F 6 100.942 118.26 86.181 1 20 ? H13 Y9Q 401 R 1 
HETATM 45 H H14 Y9Q . . . F 6 100.061 118.235 83.695 1 20 ? H14 Y9Q 401 R 1 
HETATM 46 H H15 Y9Q . . . F 6 99.894 119.677 84.704 1 20 ? H15 Y9Q 401 R 1 
HETATM 47 H H16 Y9Q . . . F 6 98.455 119.887 82.91 1 20 ? H16 Y9Q 401 R 1 
HETATM 48 H H17 Y9Q . . . F 6 97.133 120.249 84.035 1 20 ? H17 Y9Q 401 R 1 
HETATM 49 H H19 Y9Q . . . F 6 98.605 119.55 91.246 1 20 ? H19 Y9Q 401 R 1 
HETATM 50 H H20 Y9Q . . . F 6 102.462 117.61 87.527 1 20 ? H20 Y9Q 401 R 1 
HETATM 51 H H21 Y9Q . . . F 6 104.504 117.429 86.192 1 20 ? H21 Y9Q 401 R 1 
HETATM 52 H H22 Y9Q . . . F 6 106.322 119.057 86.491 1 20 ? H22 Y9Q 401 R 1 
HETATM 53 H H23 Y9Q . . . F 6 106.072 120.873 88.146 1 20 ? H23 Y9Q 401 R 1 
HETATM 54 H H24 Y9Q . . . F 6 104.02 121.044 89.478 1 20 ? H24 Y9Q 401 R 1 
HETATM 55 H H25 Y9Q . . . F 6 103.911 117.804 90.411 1 20 ? H25 Y9Q 401 R 1 
HETATM 56 H H26 Y9Q . . . F 6 105.964 117.689 91.736 1 20 ? H26 Y9Q 401 R 1 
HETATM 57 H H27 Y9Q . . . F 6 106.262 119.182 93.613 1 20 ? H27 Y9Q 401 R 1 
HETATM 58 H H28 Y9Q . . . F 6 104.534 120.827 94.238 1 20 ? H28 Y9Q 401 R 1 
HETATM 59 H H29 Y9Q . . . F 6 102.453 120.956 92.908 1 20 ? H29 Y9Q 401 R 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           59 
#