data_8X7A
#
_model_server_result.job_id            6sznT3ljKxcKUccWXJW17A 
_model_server_result.datetime_utc      '2024-11-21 22:46:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8x7a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8X7A 
#
_exptl.entry_id    8X7A 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              390.513 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Treprostinil 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8X7A 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8X7A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H34 O5' 
_chem_comp.formula_weight    390.513 
_chem_comp.id                Y9J 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Treprostinil 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2-[[(1~{R},2~{R},3~{a}~{S},9~{a}~{S})-2-oxidanyl-1-[(3~{S})-3-oxidanyloctyl]-2,3,3~{a},4,9,9~{a}-hexahydro-1~{H}-cyclopenta[g]naphthalen-5-yl]oxy]ethanoic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C23 Y9J doub 374 n n 
O3 C23 Y9J sing 375 n n 
C23 C22 Y9J sing 376 n n 
C22 O1 Y9J sing 377 n n 
C19 C20 Y9J sing 378 n y 
C19 C18 Y9J doub 379 n y 
C20 C21 Y9J doub 380 n y 
O1 C18 Y9J sing 381 n n 
C18 C16 Y9J sing 382 n y 
C21 C15 Y9J sing 383 n y 
C16 C15 Y9J doub 384 n y 
C16 C17 Y9J sing 385 n n 
C15 C14 Y9J sing 386 n n 
C17 C12 Y9J sing 387 n n 
C14 C13 Y9J sing 388 n n 
O4 C10 Y9J sing 389 n n 
C12 C11 Y9J sing 390 n n 
C12 C13 Y9J sing 391 n n 
C11 C10 Y9J sing 392 n n 
C1 C2 Y9J sing 393 n n 
C10 C9 Y9J sing 394 n n 
C13 C9 Y9J sing 395 n n 
C2 C3 Y9J sing 396 n n 
C3 C4 Y9J sing 397 n n 
C9 C8 Y9J sing 398 n n 
C4 C5 Y9J sing 399 n n 
C8 C7 Y9J sing 400 n n 
C7 C6 Y9J sing 401 n n 
C5 C6 Y9J sing 402 n n 
C6 O5 Y9J sing 403 n n 
C4 H13 Y9J sing 404 n n 
C4 H14 Y9J sing 405 n n 
C5 H16 Y9J sing 406 n n 
C5 H15 Y9J sing 407 n n 
C6 H1 Y9J sing 408 n n 
C7 H17 Y9J sing 409 n n 
C7 H18 Y9J sing 410 n n 
C8 H20 Y9J sing 411 n n 
C8 H19 Y9J sing 412 n n 
C10 H3 Y9J sing 413 n n 
C13 H5 Y9J sing 414 n n 
C17 H26 Y9J sing 415 n n 
C17 H25 Y9J sing 416 n n 
C20 H28 Y9J sing 417 n n 
C21 H29 Y9J sing 418 n n 
C22 H31 Y9J sing 419 n n 
C22 H30 Y9J sing 420 n n 
C1 H6 Y9J sing 421 n n 
C1 H7 Y9J sing 422 n n 
C1 H8 Y9J sing 423 n n 
C2 H9 Y9J sing 424 n n 
C2 H10 Y9J sing 425 n n 
C3 H12 Y9J sing 426 n n 
C3 H11 Y9J sing 427 n n 
C9 H2 Y9J sing 428 n n 
C11 H21 Y9J sing 429 n n 
C11 H22 Y9J sing 430 n n 
C12 H4 Y9J sing 431 n n 
C14 H24 Y9J sing 432 n n 
C14 H23 Y9J sing 433 n n 
C19 H27 Y9J sing 434 n n 
O3 H32 Y9J sing 435 n n 
O4 H33 Y9J sing 436 n n 
O5 H34 Y9J sing 437 n n 
#
_atom_sites.entry_id                     8X7A 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           Y9J 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      401 
_pdbx_nonpoly_scheme.auth_seq_num     401 
_pdbx_nonpoly_scheme.pdb_mon_id       Y9J 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 Y9J . . . F 6 127.263 115.794 90.789 1 20 ? C4 Y9J 401 R 1 
HETATM 2 C C5 Y9J . . . F 6 127.843 116.775 91.824 1 20 ? C5 Y9J 401 R 1 
HETATM 3 C C6 Y9J . . . F 6 129.333 116.532 91.835 1 20 ? C6 Y9J 401 R 1 
HETATM 4 C C7 Y9J . . . F 6 130.154 117.712 91.296 1 20 ? C7 Y9J 401 R 1 
HETATM 5 C C8 Y9J . . . F 6 131.601 117.201 91.064 1 20 ? C8 Y9J 401 R 1 
HETATM 6 C C10 Y9J . . . F 6 132.179 118.801 89.316 1 20 ? C10 Y9J 401 R 1 
HETATM 7 C C13 Y9J . . . F 6 133.337 116.695 89.372 1 20 ? C13 Y9J 401 R 1 
HETATM 8 C C15 Y9J . . . F 6 133.001 116.263 86.756 1 20 ? C15 Y9J 401 R 1 
HETATM 9 C C17 Y9J . . . F 6 134.787 117.646 87.544 1 20 ? C17 Y9J 401 R 1 
HETATM 10 C C20 Y9J . . . F 6 132.288 116.818 84.258 1 20 ? C20 Y9J 401 R 1 
HETATM 11 C C21 Y9J . . . F 6 132.089 116.077 85.369 1 20 ? C21 Y9J 401 R 1 
HETATM 12 C C22 Y9J . . . F 6 135.801 118.697 83.765 1 20 ? C22 Y9J 401 R 1 
HETATM 13 C C1 Y9J . . . F 6 125.018 116.711 89.269 1 20 ? C1 Y9J 401 R 1 
HETATM 14 C C2 Y9J . . . F 6 126.278 117.555 89.38 1 20 ? C2 Y9J 401 R 1 
HETATM 15 C C3 Y9J . . . F 6 127.402 116.513 89.44 1 20 ? C3 Y9J 401 R 1 
HETATM 16 C C9 Y9J . . . F 6 132.014 117.335 89.574 1 20 ? C9 Y9J 401 R 1 
HETATM 17 C C11 Y9J . . . F 6 133.708 119.161 89.183 1 20 ? C11 Y9J 401 R 1 
HETATM 18 C C12 Y9J . . . F 6 134.366 117.772 89.005 1 20 ? C12 Y9J 401 R 1 
HETATM 19 C C14 Y9J . . . F 6 133.18 115.767 88.162 1 20 ? C14 Y9J 401 R 1 
HETATM 20 C C16 Y9J . . . F 6 133.886 117.308 86.394 1 20 ? C16 Y9J 401 R 1 
HETATM 21 C C18 Y9J . . . F 6 133.892 118.001 85.021 1 20 ? C18 Y9J 401 R 1 
HETATM 22 C C19 Y9J . . . F 6 133.117 117.69 84.139 1 20 ? C19 Y9J 401 R 1 
HETATM 23 O O1 Y9J . . . F 6 134.797 119.041 84.704 1 20 ? O1 Y9J 401 R 1 
HETATM 24 C C23 Y9J . . . F 6 135.767 119.572 82.494 1 20 ? C23 Y9J 401 R 1 
HETATM 25 O O2 Y9J . . . F 6 136.794 119.866 81.855 1 20 ? O2 Y9J 401 R 1 
HETATM 26 O O3 Y9J . . . F 6 134.728 120.03 81.992 1 20 -1 O3 Y9J 401 R 1 
HETATM 27 O O4 Y9J . . . F 6 131.514 119.136 88.164 1 20 ? O4 Y9J 401 R 1 
HETATM 28 O O5 Y9J . . . F 6 129.621 116.291 93.14 1 20 ? O5 Y9J 401 R 1 
HETATM 29 H H13 Y9J . . . F 6 127.815 114.863 90.77 1 20 ? H13 Y9J 401 R 1 
HETATM 30 H H14 Y9J . . . F 6 126.233 115.572 91.05 1 20 ? H14 Y9J 401 R 1 
HETATM 31 H H16 Y9J . . . F 6 127.419 116.525 92.791 1 20 ? H16 Y9J 401 R 1 
HETATM 32 H H15 Y9J . . . F 6 127.666 117.816 91.59 1 20 ? H15 Y9J 401 R 1 
HETATM 33 H H1 Y9J . . . F 6 129.554 115.699 91.191 1 20 ? H1 Y9J 401 R 1 
HETATM 34 H H17 Y9J . . . F 6 129.744 118.013 90.348 1 20 ? H17 Y9J 401 R 1 
HETATM 35 H H18 Y9J . . . F 6 130.146 118.545 91.991 1 20 ? H18 Y9J 401 R 1 
HETATM 36 H H20 Y9J . . . F 6 132.292 117.807 91.644 1 20 ? H20 Y9J 401 R 1 
HETATM 37 H H19 Y9J . . . F 6 131.679 116.164 91.359 1 20 ? H19 Y9J 401 R 1 
HETATM 38 H H3 Y9J . . . F 6 131.795 119.362 90.153 1 20 ? H3 Y9J 401 R 1 
HETATM 39 H H5 Y9J . . . F 6 133.638 116.141 90.251 1 20 ? H5 Y9J 401 R 1 
HETATM 40 H H26 Y9J . . . F 6 135.19 118.615 87.285 1 20 ? H26 Y9J 401 R 1 
HETATM 41 H H25 Y9J . . . F 6 135.58 116.899 87.525 1 20 ? H25 Y9J 401 R 1 
HETATM 42 H H28 Y9J . . . F 6 131.662 116.602 83.423 1 20 ? H28 Y9J 401 R 1 
HETATM 43 H H29 Y9J . . . F 6 131.31 115.319 85.359 1 20 ? H29 Y9J 401 R 1 
HETATM 44 H H31 Y9J . . . F 6 136.768 118.81 84.238 1 20 ? H31 Y9J 401 R 1 
HETATM 45 H H30 Y9J . . . F 6 135.676 117.657 83.488 1 20 ? H30 Y9J 401 R 1 
HETATM 46 H H6 Y9J . . . F 6 124.314 117.206 88.6 1 20 ? H6 Y9J 401 R 1 
HETATM 47 H H7 Y9J . . . F 6 124.571 116.604 90.249 1 20 ? H7 Y9J 401 R 1 
HETATM 48 H H8 Y9J . . . F 6 125.254 115.731 88.867 1 20 ? H8 Y9J 401 R 1 
HETATM 49 H H9 Y9J . . . F 6 126.221 118.156 90.281 1 20 ? H9 Y9J 401 R 1 
HETATM 50 H H10 Y9J . . . F 6 126.388 118.212 88.529 1 20 ? H10 Y9J 401 R 1 
HETATM 51 H H12 Y9J . . . F 6 128.357 116.996 89.349 1 20 ? H12 Y9J 401 R 1 
HETATM 52 H H11 Y9J . . . F 6 127.293 115.794 88.644 1 20 ? H11 Y9J 401 R 1 
HETATM 53 H H2 Y9J . . . F 6 131.257 116.913 88.925 1 20 ? H2 Y9J 401 R 1 
HETATM 54 H H21 Y9J . . . F 6 133.867 119.794 88.312 1 20 ? H21 Y9J 401 R 1 
HETATM 55 H H22 Y9J . . . F 6 134.067 119.642 90.087 1 20 ? H22 Y9J 401 R 1 
HETATM 56 H H4 Y9J . . . F 6 135.235 117.691 89.65 1 20 ? H4 Y9J 401 R 1 
HETATM 57 H H24 Y9J . . . F 6 134.058 115.126 88.154 1 20 ? H24 Y9J 401 R 1 
HETATM 58 H H23 Y9J . . . F 6 132.298 115.177 88.37 1 20 ? H23 Y9J 401 R 1 
HETATM 59 H H27 Y9J . . . F 6 133.19 118.217 83.188 1 20 ? H27 Y9J 401 R 1 
HETATM 60 H H33 Y9J . . . F 6 131.716 118.508 87.489 1 20 ? H33 Y9J 401 R 1 
HETATM 61 H H34 Y9J . . . F 6 129.811 117.123 93.539 1 20 ? H34 Y9J 401 R 1 
#
_model_server_stats.io_time_ms              106 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           61 
#