data_8X7E # _model_server_result.job_id L9CfZ1Q5FvKI0tSMOiPs3w _model_server_result.datetime_utc '2024-12-26 16:56:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":9000}' # _entry.id 8X7E # _exptl.entry_id 8X7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 501.057 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4~{S})-6-[(2-chloranyl-4-methyl-phenyl)amino]-4-[4-cyclopropyl-5-[3-(2,2-dimethylpropyl)cyclobutyl]-1,2-oxazol-3-yl]-6-oxidanylidene-hexanoic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.67 _cell.angle_gamma 90 _cell.entry_id 8X7E _cell.length_a 90.45 _cell.length_b 79.2 _cell.length_c 97.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,M 1 1 C,D,J,N,O 2 1 E,F,K,P,Q 3 1 G,H,L,R 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C28 H37 Cl N2 O4' _chem_comp.formula_weight 501.057 _chem_comp.id YAL _chem_comp.mon_nstd_flag . _chem_comp.name '(4~{S})-6-[(2-chloranyl-4-methyl-phenyl)amino]-4-[4-cyclopropyl-5-[3-(2,2-dimethylpropyl)cyclobutyl]-1,2-oxazol-3-yl]-6-oxidanylidene-hexanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O33 C32 YAL doub 376 n n C13 C32 YAL sing 377 n n C12 C13 YAL sing 378 n n C32 O34 YAL sing 379 n n C5 C12 YAL sing 380 n n C4 C5 YAL sing 381 n n C31 C4 YAL sing 382 n n C14 C5 YAL sing 383 n n O3 C31 YAL doub 384 n n N2 C31 YAL sing 385 n n C14 N15 YAL doub 386 n y C18 C14 YAL sing 387 n y N15 O16 YAL sing 388 n y C6 N2 YAL sing 389 n n C19 C18 YAL sing 390 n n C17 C18 YAL doub 391 n y O16 C17 YAL sing 392 n y C19 C20 YAL sing 393 n n C21 C19 YAL sing 394 n n CL1 C11 YAL sing 395 n n C6 C7 YAL doub 396 n y C11 C6 YAL sing 397 n y C22 C17 YAL sing 398 n n C7 C8 YAL sing 399 n y C10 C11 YAL doub 400 n y C20 C21 YAL sing 401 n n C22 C23 YAL sing 402 n n C25 C22 YAL sing 403 n n C8 C9 YAL doub 404 n y C9 C10 YAL sing 405 n y C23 C24 YAL sing 406 n n C30 C9 YAL sing 407 n n C24 C25 YAL sing 408 n n C26 C24 YAL sing 409 n n C28 C27 YAL sing 410 n n C27 C26 YAL sing 411 n n C29 C27 YAL sing 412 n n C35 C27 YAL sing 413 n n C4 H37 YAL sing 414 n n C4 H38 YAL sing 415 n n C5 H39 YAL sing 416 n n N2 H36 YAL sing 417 n n C7 H40 YAL sing 418 n n C8 H41 YAL sing 419 n n C10 H42 YAL sing 420 n n C12 H44 YAL sing 421 n n C12 H43 YAL sing 422 n n C13 H45 YAL sing 423 n n C13 H46 YAL sing 424 n n C19 H47 YAL sing 425 n n C20 H49 YAL sing 426 n n C20 H48 YAL sing 427 n n C21 H51 YAL sing 428 n n C21 H50 YAL sing 429 n n C22 H52 YAL sing 430 n n C23 H54 YAL sing 431 n n C23 H53 YAL sing 432 n n C24 H55 YAL sing 433 n n C25 H57 YAL sing 434 n n C25 H56 YAL sing 435 n n C26 H58 YAL sing 436 n n C26 H59 YAL sing 437 n n C28 H62 YAL sing 438 n n C28 H61 YAL sing 439 n n C28 H60 YAL sing 440 n n C29 H63 YAL sing 441 n n C29 H65 YAL sing 442 n n C29 H64 YAL sing 443 n n C30 H66 YAL sing 444 n n C30 H68 YAL sing 445 n n C30 H67 YAL sing 446 n n C35 H69 YAL sing 447 n n C35 H71 YAL sing 448 n n C35 H70 YAL sing 449 n n O34 H1 YAL sing 450 n n # _atom_sites.entry_id 8X7E _atom_sites.fract_transf_matrix[1][1] 0.011056 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005314 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012626 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01141 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 YAL A 1 9000 9000 YAL MOL . J 3 YAL C 1 9000 9000 YAL MOL . K 3 YAL E 1 9000 9000 YAL MOL . L 3 YAL G 1 9000 9000 YAL MOL . M 4 HOH A 1 9101 4 HOH HOH . M 4 HOH A 2 9102 196 HOH HOH . M 4 HOH A 3 9103 164 HOH HOH . M 4 HOH A 4 9104 204 HOH HOH . M 4 HOH A 5 9105 3 HOH HOH . M 4 HOH A 6 9106 109 HOH HOH . M 4 HOH A 7 9107 114 HOH HOH . M 4 HOH A 8 9108 43 HOH HOH . M 4 HOH A 9 9109 42 HOH HOH . M 4 HOH A 10 9110 40 HOH HOH . M 4 HOH A 11 9111 165 HOH HOH . M 4 HOH A 12 9112 1 HOH HOH . M 4 HOH A 13 9113 2 HOH HOH . M 4 HOH A 14 9114 38 HOH HOH . M 4 HOH A 15 9115 52 HOH HOH . M 4 HOH A 16 9116 36 HOH HOH . M 4 HOH A 17 9117 51 HOH HOH . M 4 HOH A 18 9118 49 HOH HOH . M 4 HOH A 19 9119 148 HOH HOH . M 4 HOH A 20 9120 167 HOH HOH . M 4 HOH A 21 9121 121 HOH HOH . M 4 HOH A 22 9122 48 HOH HOH . M 4 HOH A 23 9123 44 HOH HOH . M 4 HOH A 24 9124 39 HOH HOH . M 4 HOH A 25 9125 41 HOH HOH . M 4 HOH A 26 9126 122 HOH HOH . M 4 HOH A 27 9127 149 HOH HOH . M 4 HOH A 28 9128 113 HOH HOH . M 4 HOH A 29 9129 119 HOH HOH . M 4 HOH A 30 9130 54 HOH HOH . M 4 HOH A 31 9131 169 HOH HOH . M 4 HOH A 32 9132 145 HOH HOH . M 4 HOH A 33 9133 111 HOH HOH . M 4 HOH A 34 9134 180 HOH HOH . M 4 HOH A 35 9135 53 HOH HOH . M 4 HOH A 36 9136 123 HOH HOH . M 4 HOH A 37 9137 195 HOH HOH . M 4 HOH A 38 9138 146 HOH HOH . M 4 HOH A 39 9139 108 HOH HOH . M 4 HOH A 40 9140 116 HOH HOH . M 4 HOH A 41 9141 118 HOH HOH . M 4 HOH A 42 9142 60 HOH HOH . M 4 HOH A 43 9143 37 HOH HOH . M 4 HOH A 44 9144 46 HOH HOH . M 4 HOH A 45 9145 120 HOH HOH . M 4 HOH A 46 9146 112 HOH HOH . M 4 HOH A 47 9147 47 HOH HOH . M 4 HOH A 48 9148 115 HOH HOH . M 4 HOH A 49 9149 110 HOH HOH . N 4 HOH C 1 9101 72 HOH HOH . N 4 HOH C 2 9102 66 HOH HOH . N 4 HOH C 3 9103 201 HOH HOH . N 4 HOH C 4 9104 15 HOH HOH . N 4 HOH C 5 9105 154 HOH HOH . N 4 HOH C 6 9106 18 HOH HOH . N 4 HOH C 7 9107 9 HOH HOH . N 4 HOH C 8 9108 172 HOH HOH . N 4 HOH C 9 9109 155 HOH HOH . N 4 HOH C 10 9110 125 HOH HOH . N 4 HOH C 11 9111 57 HOH HOH . N 4 HOH C 12 9112 8 HOH HOH . N 4 HOH C 13 9113 187 HOH HOH . N 4 HOH C 14 9114 126 HOH HOH . N 4 HOH C 15 9115 63 HOH HOH . N 4 HOH C 16 9116 67 HOH HOH . N 4 HOH C 17 9117 71 HOH HOH . N 4 HOH C 18 9118 73 HOH HOH . N 4 HOH C 19 9119 6 HOH HOH . N 4 HOH C 20 9120 19 HOH HOH . N 4 HOH C 21 9121 35 HOH HOH . N 4 HOH C 22 9122 7 HOH HOH . N 4 HOH C 23 9123 58 HOH HOH . N 4 HOH C 24 9124 59 HOH HOH . N 4 HOH C 25 9125 166 HOH HOH . N 4 HOH C 26 9126 13 HOH HOH . N 4 HOH C 27 9127 153 HOH HOH . N 4 HOH C 28 9128 14 HOH HOH . N 4 HOH C 29 9129 65 HOH HOH . N 4 HOH C 30 9130 10 HOH HOH . N 4 HOH C 31 9131 173 HOH HOH . N 4 HOH C 32 9132 5 HOH HOH . N 4 HOH C 33 9133 127 HOH HOH . N 4 HOH C 34 9134 17 HOH HOH . N 4 HOH C 35 9135 61 HOH HOH . N 4 HOH C 36 9136 182 HOH HOH . N 4 HOH C 37 9137 202 HOH HOH . N 4 HOH C 38 9138 150 HOH HOH . N 4 HOH C 39 9139 181 HOH HOH . N 4 HOH C 40 9140 184 HOH HOH . N 4 HOH C 41 9141 170 HOH HOH . N 4 HOH C 42 9142 56 HOH HOH . N 4 HOH C 43 9143 152 HOH HOH . N 4 HOH C 44 9144 128 HOH HOH . N 4 HOH C 45 9145 68 HOH HOH . N 4 HOH C 46 9146 183 HOH HOH . N 4 HOH C 47 9147 62 HOH HOH . N 4 HOH C 48 9148 11 HOH HOH . N 4 HOH C 49 9149 171 HOH HOH . N 4 HOH C 50 9150 185 HOH HOH . N 4 HOH C 51 9151 129 HOH HOH . N 4 HOH C 52 9152 188 HOH HOH . N 4 HOH C 53 9153 186 HOH HOH . N 4 HOH C 54 9154 64 HOH HOH . N 4 HOH C 55 9155 117 HOH HOH . O 4 HOH D 1 2401 16 HOH HOH . O 4 HOH D 2 2402 74 HOH HOH . O 4 HOH D 3 2403 12 HOH HOH . P 4 HOH E 1 9101 136 HOH HOH . P 4 HOH E 2 9102 81 HOH HOH . P 4 HOH E 3 9103 21 HOH HOH . P 4 HOH E 4 9104 80 HOH HOH . P 4 HOH E 5 9105 190 HOH HOH . P 4 HOH E 6 9106 205 HOH HOH . P 4 HOH E 7 9107 25 HOH HOH . P 4 HOH E 8 9108 87 HOH HOH . P 4 HOH E 9 9109 22 HOH HOH . P 4 HOH E 10 9110 175 HOH HOH . P 4 HOH E 11 9111 131 HOH HOH . P 4 HOH E 12 9112 176 HOH HOH . P 4 HOH E 13 9113 89 HOH HOH . P 4 HOH E 14 9114 75 HOH HOH . P 4 HOH E 15 9115 82 HOH HOH . P 4 HOH E 16 9116 24 HOH HOH . P 4 HOH E 17 9117 77 HOH HOH . P 4 HOH E 18 9118 88 HOH HOH . P 4 HOH E 19 9119 174 HOH HOH . P 4 HOH E 20 9120 90 HOH HOH . P 4 HOH E 21 9121 20 HOH HOH . P 4 HOH E 22 9122 191 HOH HOH . P 4 HOH E 23 9123 27 HOH HOH . P 4 HOH E 24 9124 23 HOH HOH . P 4 HOH E 25 9125 159 HOH HOH . P 4 HOH E 26 9126 158 HOH HOH . P 4 HOH E 27 9127 26 HOH HOH . P 4 HOH E 28 9128 192 HOH HOH . P 4 HOH E 29 9129 162 HOH HOH . P 4 HOH E 30 9130 161 HOH HOH . P 4 HOH E 31 9131 76 HOH HOH . P 4 HOH E 32 9132 132 HOH HOH . P 4 HOH E 33 9133 134 HOH HOH . P 4 HOH E 34 9134 92 HOH HOH . P 4 HOH E 35 9135 91 HOH HOH . P 4 HOH E 36 9136 79 HOH HOH . P 4 HOH E 37 9137 86 HOH HOH . P 4 HOH E 38 9138 160 HOH HOH . P 4 HOH E 39 9139 29 HOH HOH . P 4 HOH E 40 9140 193 HOH HOH . P 4 HOH E 41 9141 78 HOH HOH . P 4 HOH E 42 9142 133 HOH HOH . P 4 HOH E 43 9143 189 HOH HOH . P 4 HOH E 44 9144 83 HOH HOH . P 4 HOH E 45 9145 85 HOH HOH . P 4 HOH E 46 9146 157 HOH HOH . P 4 HOH E 47 9147 200 HOH HOH . Q 4 HOH F 1 2401 203 HOH HOH . R 4 HOH G 1 9101 137 HOH HOH . R 4 HOH G 2 9102 140 HOH HOH . R 4 HOH G 3 9103 96 HOH HOH . R 4 HOH G 4 9104 177 HOH HOH . R 4 HOH G 5 9105 95 HOH HOH . R 4 HOH G 6 9106 99 HOH HOH . R 4 HOH G 7 9107 141 HOH HOH . R 4 HOH G 8 9108 199 HOH HOH . R 4 HOH G 9 9109 31 HOH HOH . R 4 HOH G 10 9110 100 HOH HOH . R 4 HOH G 11 9111 143 HOH HOH . R 4 HOH G 12 9112 101 HOH HOH . R 4 HOH G 13 9113 33 HOH HOH . R 4 HOH G 14 9114 30 HOH HOH . R 4 HOH G 15 9115 97 HOH HOH . R 4 HOH G 16 9116 107 HOH HOH . R 4 HOH G 17 9117 179 HOH HOH . R 4 HOH G 18 9118 32 HOH HOH . R 4 HOH G 19 9119 144 HOH HOH . R 4 HOH G 20 9120 142 HOH HOH . R 4 HOH G 21 9121 198 HOH HOH . R 4 HOH G 22 9122 34 HOH HOH . R 4 HOH G 23 9123 178 HOH HOH . R 4 HOH G 24 9124 104 HOH HOH . R 4 HOH G 25 9125 106 HOH HOH . R 4 HOH G 26 9126 103 HOH HOH . R 4 HOH G 27 9127 105 HOH HOH . R 4 HOH G 28 9128 102 HOH HOH . R 4 HOH G 29 9129 156 HOH HOH . R 4 HOH G 30 9130 197 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 YAL . . . L 3 21.728 4.602 26.355 1 33.41 ? C4 YAL 9000 G 1 HETATM 2 C C5 YAL . . . L 3 22.78 3.749 27.099 1 35.9 ? C5 YAL 9000 G 1 HETATM 3 C C6 YAL . . . L 3 18.507 4.987 28.407 1 26.48 ? C6 YAL 9000 G 1 HETATM 4 N N2 YAL . . . L 3 19.596 4.619 27.574 1 28.61 ? N2 YAL 9000 G 1 HETATM 5 C C7 YAL . . . L 3 18.277 6.306 28.797 1 29.68 ? C7 YAL 9000 G 1 HETATM 6 C C8 YAL . . . L 3 17.192 6.644 29.618 1 25.41 ? C8 YAL 9000 G 1 HETATM 7 C C9 YAL . . . L 3 16.306 5.669 30.074 1 29.6 ? C9 YAL 9000 G 1 HETATM 8 C C10 YAL . . . L 3 16.521 4.344 29.693 1 27.35 ? C10 YAL 9000 G 1 HETATM 9 C C11 YAL . . . L 3 17.602 4.006 28.869 1 30.86 ? C11 YAL 9000 G 1 HETATM 10 C C12 YAL . . . L 3 23.843 3.105 26.172 1 37.97 ? C12 YAL 9000 G 1 HETATM 11 C C13 YAL . . . L 3 23.326 2.578 24.834 1 44.52 ? C13 YAL 9000 G 1 HETATM 12 C C14 YAL . . . L 3 22.115 2.684 27.935 1 35.46 ? C14 YAL 9000 G 1 HETATM 13 C C17 YAL . . . L 3 21.298 1.455 29.585 1 33.96 ? C17 YAL 9000 G 1 HETATM 14 C C18 YAL . . . L 3 21.978 2.628 29.347 1 36.5 ? C18 YAL 9000 G 1 HETATM 15 C C19 YAL . . . L 3 22.526 3.705 30.26 1 31.47 ? C19 YAL 9000 G 1 HETATM 16 C C20 YAL . . . L 3 23.986 4.065 30.315 1 33.44 ? C20 YAL 9000 G 1 HETATM 17 C C21 YAL . . . L 3 23.381 3.284 31.433 1 33.09 ? C21 YAL 9000 G 1 HETATM 18 C C22 YAL . . . L 3 20.865 0.852 30.9 1 31.84 ? C22 YAL 9000 G 1 HETATM 19 C C23 YAL . . . L 3 19.45 0.219 30.955 1 33.1 ? C23 YAL 9000 G 1 HETATM 20 C C24 YAL . . . L 3 19.243 0.926 32.32 1 33.86 ? C24 YAL 9000 G 1 HETATM 21 C C25 YAL . . . L 3 20.335 1.927 31.876 1 34.51 ? C25 YAL 9000 G 1 HETATM 22 C C26 YAL . . . L 3 17.946 1.666 32.621 1 34.53 ? C26 YAL 9000 G 1 HETATM 23 C C27 YAL . . . L 3 16.816 0.822 33.249 1 36.99 ? C27 YAL 9000 G 1 HETATM 24 C C28 YAL . . . L 3 16.33 -0.268 32.288 1 35.33 ? C28 YAL 9000 G 1 HETATM 25 C C29 YAL . . . L 3 15.64 1.786 33.509 1 37.18 ? C29 YAL 9000 G 1 HETATM 26 C C30 YAL . . . L 3 15.15 6.039 30.953 1 28.37 ? C30 YAL 9000 G 1 HETATM 27 C C31 YAL . . . L 3 20.772 5.311 27.319 1 29.73 ? C31 YAL 9000 G 1 HETATM 28 C C32 YAL . . . L 3 24.159 1.445 24.222 1 47.34 ? C32 YAL 9000 G 1 HETATM 29 C C35 YAL . . . L 3 17.238 0.185 34.581 1 35.86 ? C35 YAL 9000 G 1 HETATM 30 N N15 YAL . . . L 3 21.553 1.615 27.354 1 38.87 ? N15 YAL 9000 G 1 HETATM 31 O O16 YAL . . . L 3 21.05 0.855 28.385 1 41.59 ? O16 YAL 9000 G 1 HETATM 32 O O3 YAL . . . L 3 21.081 6.392 27.809 1 31.08 ? O3 YAL 9000 G 1 HETATM 33 O O33 YAL . . . L 3 23.91 0.304 24.711 1 44.04 ? O33 YAL 9000 G 1 HETATM 34 O O34 YAL . . . L 3 24.977 1.774 23.317 1 51.15 ? O34 YAL 9000 G 1 HETATM 35 CL CL1 YAL . . . L 3 17.759 2.328 28.47 1 31.51 ? CL1 YAL 9000 G 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #