data_8X7H # _model_server_result.job_id E59BM_GvbOXoZTo-QWcoow _model_server_result.datetime_utc '2025-06-23 19:58:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x7h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":201}' # _entry.id 8X7H # _exptl.entry_id 8X7H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 103.09 _cell.angle_beta 90.9 _cell.angle_gamma 106.23 _cell.entry_id 8X7H _cell.length_a 56.855 _cell.length_b 87.613 _cell.length_c 88.44 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X7H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,U,V 1 1 C,D,K,L,M,N,O,W,X 2 1 E,F,P,Y,Z 3 1 G,H,Q,R,S,T,AA,BA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 R N N ? 4 S N N ? 4 T N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 8X7H _atom_sites.fract_transf_matrix[1][1] 0.017589 _atom_sites.fract_transf_matrix[1][2] 0.00512 _atom_sites.fract_transf_matrix[1][3] 0.001553 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011888 _atom_sites.fract_transf_matrix[2][3] 0.002945 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01165 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 YBI A 1 301 301 YBI 162 . J 4 GOL B 1 201 202 GOL GOL . K 3 YBI C 1 301 301 YBI 162 . L 4 GOL D 1 201 201 GOL GOL . M 4 GOL D 1 202 302 GOL GOL . N 4 GOL D 1 203 5 GOL GOL . O 4 GOL D 1 204 6 GOL GOL . P 3 YBI E 1 301 301 YBI 162 . Q 3 YBI G 1 301 301 YBI 162 . R 4 GOL G 1 302 1 GOL GOL . S 4 GOL G 1 303 2 GOL GOL . T 4 GOL H 1 201 201 GOL GOL . U 5 HOH A 1 401 118 HOH HOH . U 5 HOH A 2 402 223 HOH HOH . U 5 HOH A 3 403 231 HOH HOH . U 5 HOH A 4 404 66 HOH HOH . U 5 HOH A 5 405 116 HOH HOH . U 5 HOH A 6 406 219 HOH HOH . U 5 HOH A 7 407 208 HOH HOH . U 5 HOH A 8 408 24 HOH HOH . U 5 HOH A 9 409 232 HOH HOH . U 5 HOH A 10 410 166 HOH HOH . U 5 HOH A 11 411 218 HOH HOH . V 5 HOH B 1 301 79 HOH HOH . V 5 HOH B 2 302 23 HOH HOH . V 5 HOH B 3 303 100 HOH HOH . V 5 HOH B 4 304 27 HOH HOH . V 5 HOH B 5 305 164 HOH HOH . V 5 HOH B 6 306 225 HOH HOH . V 5 HOH B 7 307 1 HOH HOH . V 5 HOH B 8 308 26 HOH HOH . V 5 HOH B 9 309 221 HOH HOH . V 5 HOH B 10 310 233 HOH HOH . V 5 HOH B 11 311 220 HOH HOH . W 5 HOH C 1 401 20 HOH HOH . W 5 HOH C 2 402 237 HOH HOH . W 5 HOH C 3 403 128 HOH HOH . W 5 HOH C 4 404 186 HOH HOH . W 5 HOH C 5 405 241 HOH HOH . W 5 HOH C 6 406 240 HOH HOH . W 5 HOH C 7 407 239 HOH HOH . W 5 HOH C 8 408 236 HOH HOH . W 5 HOH C 9 409 224 HOH HOH . W 5 HOH C 10 410 227 HOH HOH . X 5 HOH D 1 301 171 HOH HOH . X 5 HOH D 2 302 133 HOH HOH . X 5 HOH D 3 303 19 HOH HOH . X 5 HOH D 4 304 32 HOH HOH . X 5 HOH D 5 305 75 HOH HOH . X 5 HOH D 6 306 194 HOH HOH . X 5 HOH D 7 307 70 HOH HOH . X 5 HOH D 8 308 178 HOH HOH . X 5 HOH D 9 309 230 HOH HOH . X 5 HOH D 10 310 234 HOH HOH . X 5 HOH D 11 311 222 HOH HOH . X 5 HOH D 12 312 228 HOH HOH . Y 5 HOH E 1 401 50 HOH HOH . Y 5 HOH E 2 402 217 HOH HOH . Y 5 HOH E 3 403 167 HOH HOH . Y 5 HOH E 4 404 61 HOH HOH . Y 5 HOH E 5 405 17 HOH HOH . Y 5 HOH E 6 406 59 HOH HOH . Y 5 HOH E 7 407 13 HOH HOH . Z 5 HOH F 1 201 38 HOH HOH . Z 5 HOH F 2 202 15 HOH HOH . Z 5 HOH F 3 203 22 HOH HOH . Z 5 HOH F 4 204 162 HOH HOH . AA 5 HOH G 1 401 111 HOH HOH . AA 5 HOH G 2 402 73 HOH HOH . AA 5 HOH G 3 403 112 HOH HOH . AA 5 HOH G 4 404 235 HOH HOH . AA 5 HOH G 5 405 226 HOH HOH . AA 5 HOH G 6 406 229 HOH HOH . BA 5 HOH H 1 301 175 HOH HOH . BA 5 HOH H 2 302 126 HOH HOH . BA 5 HOH H 3 303 238 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . T 4 -1.524 -12.498 46.123 1 20.82 ? C1 GOL 201 H 1 HETATM 2 O O1 GOL . . . T 4 -1.83 -11.707 47.253 1 89.6 ? O1 GOL 201 H 1 HETATM 3 C C2 GOL . . . T 4 -0.113 -12.988 46.357 1 87.76 ? C2 GOL 201 H 1 HETATM 4 O O2 GOL . . . T 4 0.68 -12.862 45.236 1 95.94 ? O2 GOL 201 H 1 HETATM 5 C C3 GOL . . . T 4 0.416 -12.109 47.479 1 43.29 ? C3 GOL 201 H 1 HETATM 6 O O3 GOL . . . T 4 1.794 -12.123 47.259 1 61.76 ? O3 GOL 201 H 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 504 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #