data_8X7M
#
_model_server_result.job_id            Xb6J0tRNfkQvF6ejLtpEZw 
_model_server_result.datetime_utc      '2025-01-22 00:30:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8x7m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":201}' 
#
_entry.id    8X7M 
#
_exptl.entry_id    8X7M 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              696.663 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)" 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 Z N N 
#
_chem_comp.formula           'C32 H22 N6 Na2 O6 S2' 
_chem_comp.formula_weight    696.663 
_chem_comp.id                CGO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'congo red' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1' S1' CGO sing 44 n n 
C12 C13 CGO doub 45 n y 
C12 C11 CGO sing 46 n y 
O2' S1' CGO doub 47 n n 
S1' O3' CGO doub 48 n n 
S1' C9' CGO sing 49 n n 
C12' C11' CGO doub 50 n y 
C12' C13' CGO sing 51 n y 
C11' C10' CGO sing 52 n y 
C10' C9' CGO doub 53 n y 
C10' C15' CGO sing 54 n y 
C9' C8' CGO sing 55 n y 
C8' C7' CGO doub 56 n y 
C13' C14' CGO doub 57 n y 
C14' C15' CGO sing 58 n y 
C15' C16' CGO doub 59 n y 
C16' C7' CGO sing 60 n y 
C16' N3' CGO sing 61 n n 
C7' N2' CGO sing 62 n n 
N2' N1' CGO doub 63 n n 
N1' C4' CGO sing 64 n n 
C4' C5' CGO doub 65 n y 
C4' C3' CGO sing 66 n y 
C5' C6' CGO sing 67 n y 
C6' C1' CGO doub 68 n y 
O1 S1 CGO sing 69 n n 
C3' C2' CGO doub 70 n y 
C2' C1' CGO sing 71 n y 
C1' C1 CGO sing 72 n y 
C1 C2 CGO doub 73 n y 
C1 C6 CGO sing 74 n y 
C2 C3 CGO sing 75 n y 
C3 C4 CGO doub 76 n y 
S1 O2 CGO doub 77 n n 
S1 O3 CGO doub 78 n n 
S1 C9 CGO sing 79 n n 
N3 C16 CGO sing 80 n n 
C6 C5 CGO doub 81 n y 
C5 C4 CGO sing 82 n y 
C4 N1 CGO sing 83 n n 
N1 N2 CGO doub 84 n n 
N2 C7 CGO sing 85 n n 
C7 C16 CGO doub 86 n y 
C7 C8 CGO sing 87 n y 
C16 C15 CGO sing 88 n y 
C15 C14 CGO doub 89 n y 
C15 C10 CGO sing 90 n y 
C14 C13 CGO sing 91 n y 
C8 C9 CGO doub 92 n y 
C9 C10 CGO sing 93 n y 
C10 C11 CGO doub 94 n y 
O1' NA' CGO sing 95 n n 
C12 H12 CGO sing 96 n n 
C12' H12' CGO sing 97 n n 
C11' H11' CGO sing 98 n n 
C8' H8' CGO sing 99 n n 
C13' H13' CGO sing 100 n n 
C14' H14' CGO sing 101 n n 
C5' H5' CGO sing 102 n n 
C6' H6' CGO sing 103 n n 
O1 NA CGO sing 104 n n 
N3' HN1' CGO sing 105 n n 
N3' HN2' CGO sing 106 n n 
C3' H3' CGO sing 107 n n 
C2' H2' CGO sing 108 n n 
C2 H2 CGO sing 109 n n 
C3 H3 CGO sing 110 n n 
N3 HN2 CGO sing 111 n n 
N3 HN1 CGO sing 112 n n 
C6 H6 CGO sing 113 n n 
C5 H5 CGO sing 114 n n 
C14 H14 CGO sing 115 n n 
C13 H13 CGO sing 116 n n 
C8 H8 CGO sing 117 n n 
C11 H11 CGO sing 118 n n 
#
_atom_sites.entry_id                     8X7M 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 2 CGO F 1 201 1 CGO CR . 
L 2 CGO F 1 202 1 CGO CR . 
M 2 CGO G 1 201 1 CGO CR . 
N 2 CGO G 1 202 1 CGO CR . 
O 2 CGO C 1 201 1 CGO CR . 
P 2 CGO C 1 202 1 CGO CR . 
Q 2 CGO D 1 201 1 CGO CR . 
R 2 CGO E 1 201 1 CGO CR . 
S 2 CGO E 1 202 1 CGO CR . 
T 2 CGO A 1 201 1 CGO CR . 
U 2 CGO A 1 202 1 CGO CR . 
V 2 CGO B 1 201 1 CGO CR . 
W 2 CGO H 1 201 1 CGO CR . 
X 2 CGO I 1 201 1 CGO CR . 
Y 2 CGO J 1 201 1 CGO CR . 
Z 2 CGO J 1 202 1 CGO CR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1' CGO . . . R 2 110.078 75.239 103.67 1 20 ? O1' CGO 201 E 1 
HETATM 2 C C12 CGO . . . R 2 132.252 73.328 108.832 1 20 ? C12 CGO 201 E 1 
HETATM 3 O O2' CGO . . . R 2 111.965 74.147 102.838 1 20 ? O2' CGO 201 E 1 
HETATM 4 S S1' CGO . . . R 2 111.258 75.479 102.758 1 20 ? S1' CGO 201 E 1 
HETATM 5 O O3' CGO . . . R 2 110.808 75.777 101.348 1 20 ? O3' CGO 201 E 1 
HETATM 6 C C12' CGO . . . R 2 109.88 79.618 103.47 1 20 ? C12' CGO 201 E 1 
HETATM 7 C C11' CGO . . . R 2 110.427 78.362 103.241 1 20 ? C11' CGO 201 E 1 
HETATM 8 C C10' CGO . . . R 2 111.774 78.113 103.557 1 20 ? C10' CGO 201 E 1 
HETATM 9 C C9' CGO . . . R 2 112.311 76.822 103.382 1 20 ? C9' CGO 201 E 1 
HETATM 10 C C8' CGO . . . R 2 113.624 76.561 103.749 1 20 ? C8' CGO 201 E 1 
HETATM 11 C C13' CGO . . . R 2 110.667 80.63 104.01 1 20 ? C13' CGO 201 E 1 
HETATM 12 C C14' CGO . . . R 2 111.998 80.385 104.322 1 20 ? C14' CGO 201 E 1 
HETATM 13 C C15' CGO . . . R 2 112.551 79.112 104.092 1 20 ? C15' CGO 201 E 1 
HETATM 14 C C16' CGO . . . R 2 113.884 78.845 104.463 1 20 ? C16' CGO 201 E 1 
HETATM 15 C C7' CGO . . . R 2 114.412 77.574 104.291 1 20 ? C7' CGO 201 E 1 
HETATM 16 N N2' CGO . . . R 2 115.796 77.306 104.654 1 20 ? N2' CGO 201 E 1 
HETATM 17 N N1' CGO . . . R 2 116.27 76.199 104.477 1 20 ? N1' CGO 201 E 1 
HETATM 18 C C4' CGO . . . R 2 117.654 75.929 104.844 1 20 ? C4' CGO 201 E 1 
HETATM 19 C C5' CGO . . . R 2 118.192 74.666 104.644 1 20 ? C5' CGO 201 E 1 
HETATM 20 C C6' CGO . . . R 2 119.51 74.412 104.989 1 20 ? C6' CGO 201 E 1 
HETATM 21 O O1 CGO . . . R 2 131.224 69.86 106.275 1 20 ? O1 CGO 201 E 1 
HETATM 22 N N3' CGO . . . R 2 114.706 79.903 105.026 1 20 ? N3' CGO 201 E 1 
HETATM 23 C C3' CGO . . . R 2 118.434 76.935 105.393 1 20 ? C3' CGO 201 E 1 
HETATM 24 C C2' CGO . . . R 2 119.752 76.681 105.738 1 20 ? C2' CGO 201 E 1 
HETATM 25 C C1' CGO . . . R 2 120.29 75.418 105.537 1 20 ? C1' CGO 201 E 1 
HETATM 26 C C1 CGO . . . R 2 121.614 75.164 105.883 1 20 ? C1 CGO 201 E 1 
HETATM 27 C C2 CGO . . . R 2 122.153 73.899 105.711 1 20 ? C2 CGO 201 E 1 
HETATM 28 C C3 CGO . . . R 2 123.472 73.655 106.063 1 20 ? C3 CGO 201 E 1 
HETATM 29 S S1 CGO . . . R 2 130.043 69.852 107.217 1 20 ? S1 CGO 201 E 1 
HETATM 30 N N3 CGO . . . R 2 127.699 75.384 107.92 1 20 ? N3 CGO 201 E 1 
HETATM 31 O O2 CGO . . . R 2 129.088 68.941 106.483 1 20 ? O2 CGO 201 E 1 
HETATM 32 O O3 CGO . . . R 2 130.421 69.281 108.563 1 20 ? O3 CGO 201 E 1 
HETATM 33 C C6 CGO . . . R 2 122.392 76.185 106.405 1 20 ? C6 CGO 201 E 1 
HETATM 34 C C5 CGO . . . R 2 123.711 75.94 106.755 1 20 ? C5 CGO 201 E 1 
HETATM 35 C C4 CGO . . . R 2 124.25 74.675 106.585 1 20 ? C4 CGO 201 E 1 
HETATM 36 N N1 CGO . . . R 2 125.626 74.409 106.988 1 20 ? N1 CGO 201 E 1 
HETATM 37 N N2 CGO . . . R 2 126.114 73.305 106.801 1 20 ? N2 CGO 201 E 1 
HETATM 38 C C7 CGO . . . R 2 127.491 73.039 107.205 1 20 ? C7 CGO 201 E 1 
HETATM 39 C C16 CGO . . . R 2 128.268 74.062 107.733 1 20 ? C16 CGO 201 E 1 
HETATM 40 C C15 CGO . . . R 2 129.603 73.811 108.105 1 20 ? C15 CGO 201 E 1 
HETATM 41 C C14 CGO . . . R 2 130.397 74.848 108.632 1 20 ? C14 CGO 201 E 1 
HETATM 42 C C13 CGO . . . R 2 131.714 74.601 108.992 1 20 ? C13 CGO 201 E 1 
HETATM 43 C C8 CGO . . . R 2 128.029 71.767 107.044 1 20 ? C8 CGO 201 E 1 
HETATM 44 C C9 CGO . . . R 2 129.345 71.518 107.412 1 20 ? C9 CGO 201 E 1 
HETATM 45 C C10 CGO . . . R 2 130.135 72.554 107.947 1 20 ? C10 CGO 201 E 1 
HETATM 46 C C11 CGO . . . R 2 131.471 72.303 108.312 1 20 ? C11 CGO 201 E 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           46 
#