data_8X83 # _model_server_result.job_id WYJZ24Fohm3yjNJfZG3xsA _model_server_result.datetime_utc '2024-12-22 06:53:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8x83 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":501}' # _entry.id 8X83 # _exptl.entry_id 8X83 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-fructofuranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8X83 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8X83 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id FRU _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-fructose;D-fructose;fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FRU sing 83 n n C1 O1 FRU sing 84 n n C1 H11 FRU sing 85 n n C1 H12 FRU sing 86 n n C2 C3 FRU sing 87 n n C2 O2 FRU sing 88 n n C2 O5 FRU sing 89 n n C3 C4 FRU sing 90 n n C3 O3 FRU sing 91 n n C3 H3 FRU sing 92 n n C4 C5 FRU sing 93 n n C4 O4 FRU sing 94 n n C4 H4 FRU sing 95 n n C5 C6 FRU sing 96 n n C5 O5 FRU sing 97 n n C5 H5 FRU sing 98 n n C6 O6 FRU sing 99 n n C6 H61 FRU sing 100 n n C6 H62 FRU sing 101 n n O1 HO1 FRU sing 102 n n O2 HO2 FRU sing 103 n n O3 HO3 FRU sing 104 n n O4 HO4 FRU sing 105 n n O6 HO6 FRU sing 106 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version FRU DFrufb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 FRU b-D-fructofuranose 'COMMON NAME' GMML 1 FRU b-D-Fruf 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 FRU Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8X83 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NA A 1 501 1 NA NA . F 2 NA A 1 502 2 NA NA . G 3 FRU A 1 503 504 FRU FRU . H 3 FRU B 1 501 505 FRU FRU . I 3 FRU C 1 501 506 FRU FRU . J 3 FRU D 1 501 507 FRU FRU . K 4 HOH A 1 601 4 HOH HOH . L 4 HOH B 1 601 1 HOH HOH . M 4 HOH C 1 601 2 HOH HOH . N 4 HOH D 1 601 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FRU . . . I 3 86.064 120.796 93.818 1 43.94 0 C1 FRU 501 C 1 HETATM 2 C C2 FRU . . . I 3 87.443 120.196 93.56 1 44.28 0 C2 FRU 501 C 1 HETATM 3 C C3 FRU . . . I 3 88.265 120.252 94.797 1 38.64 0 C3 FRU 501 C 1 HETATM 4 C C4 FRU . . . I 3 89.612 120.64 94.385 1 38.13 0 C4 FRU 501 C 1 HETATM 5 C C5 FRU . . . I 3 89.46 121.367 93.093 1 42.32 0 C5 FRU 501 C 1 HETATM 6 C C6 FRU . . . I 3 90.541 120.999 92.135 1 42.89 0 C6 FRU 501 C 1 HETATM 7 O O1 FRU . . . I 3 85.146 120.263 92.905 1 49.25 0 O1 FRU 501 C 1 HETATM 8 O O2 FRU . . . I 3 87.318 118.902 93.149 1 44.28 0 O2 FRU 501 C 1 HETATM 9 O O3 FRU . . . I 3 88.294 118.955 95.433 1 35.68 0 O3 FRU 501 C 1 HETATM 10 O O4 FRU . . . I 3 90.198 121.506 95.382 1 39.59 0 O4 FRU 501 C 1 HETATM 11 O O5 FRU . . . I 3 88.143 120.991 92.519 1 46.58 0 O5 FRU 501 C 1 HETATM 12 O O6 FRU . . . I 3 90.608 119.607 91.99 1 49.96 0 O6 FRU 501 C 1 HETATM 13 H H11 FRU . . . I 3 86.106 121.758 93.709 1 41.14 0 H11 FRU 501 C 1 HETATM 14 H H12 FRU . . . I 3 85.782 120.583 94.72 1 41.6 0 H12 FRU 501 C 1 HETATM 15 H H3 FRU . . . I 3 87.905 120.915 95.405 1 40.86 0 H3 FRU 501 C 1 HETATM 16 H H4 FRU . . . I 3 90.16 119.85 94.267 1 40.7 0 H4 FRU 501 C 1 HETATM 17 H H5 FRU . . . I 3 89.48 122.322 93.258 1 41.31 0 H5 FRU 501 C 1 HETATM 18 H H61 FRU . . . I 3 90.353 121.402 91.273 1 41.11 0 H61 FRU 501 C 1 HETATM 19 H H62 FRU . . . I 3 91.389 121.331 92.462 1 41.3 0 H62 FRU 501 C 1 HETATM 20 H HO1 FRU . . . I 3 84.401 120.137 93.295 1 42.31 0 HO1 FRU 501 C 1 HETATM 21 H HO2 FRU . . . I 3 88.067 118.624 92.857 1 41.38 0 HO2 FRU 501 C 1 HETATM 22 H HO3 FRU . . . I 3 88.871 118.96 96.056 1 40.55 0 HO3 FRU 501 C 1 HETATM 23 H HO4 FRU . . . I 3 90.943 121.799 95.099 1 41.51 0 HO4 FRU 501 C 1 HETATM 24 H HO6 FRU . . . I 3 89.973 119.343 91.493 1 41.73 0 HO6 FRU 501 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #