data_8XBH
#
_model_server_result.job_id            Gx8g3eCM09QrHCbE4tFyew 
_model_server_result.datetime_utc      '2024-10-11 00:27:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xbh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8XBH 
#
_exptl.entry_id    8XBH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              617.581 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{S})-2-azanyl-3-[[(2~{R})-1-ethoxy-3-[3-[2-[(3-phenoxyphenyl)methoxy]phenyl]propanoyloxy]propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-propanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8XBH 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8XBH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 107 B CYS 103 1_555 B SG CYS 118 B CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf2 D SG CYS 55 R CYS 46 1_555 D SG CYS 308 R CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 D SG CYS 136 R CYS 127 1_555 D SG CYS 213 R CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 E SG CYS 22 S CYS 22 1_555 E SG CYS 96 S CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 E SG CYS 159 S CYS 147 1_555 E SG CYS 229 S CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C30 H36 N O11 P' 
_chem_comp.formula_weight    617.581 
_chem_comp.id                KW3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{S})-2-azanyl-3-[[(2~{R})-1-ethoxy-3-[3-[2-[(3-phenoxyphenyl)methoxy]phenyl]propanoyloxy]propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-propanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O10 C30 KW3 doub 171 n n 
C1 C2 KW3 sing 172 n n 
C2 O1 KW3 sing 173 n n 
C30 O11 KW3 sing 174 n n 
C30 C29 KW3 sing 175 n n 
N1 C29 KW3 sing 176 n n 
O1 C3 KW3 sing 177 n n 
C7 C6 KW3 sing 178 n n 
C7 C8 KW3 sing 179 n n 
C29 C28 KW3 sing 180 n n 
O3 C6 KW3 doub 181 n n 
C10 C11 KW3 doub 182 n y 
C10 C9 KW3 sing 183 n y 
C6 O2 KW3 sing 184 n n 
C8 C9 KW3 sing 185 n n 
C3 C4 KW3 sing 186 n n 
C11 C12 KW3 sing 187 n y 
C9 C14 KW3 doub 188 n y 
C28 O9 KW3 sing 189 n n 
C22 C23 KW3 doub 190 n y 
C22 C21 KW3 sing 191 n y 
C23 C24 KW3 sing 192 n y 
O2 C5 KW3 sing 193 n n 
C12 C13 KW3 doub 194 n y 
C4 O6 KW3 sing 195 n n 
C4 C5 KW3 sing 196 n n 
O5 C21 KW3 sing 197 n n 
O5 C20 KW3 sing 198 n n 
C21 C26 KW3 doub 199 n y 
C14 C13 KW3 sing 200 n y 
C14 O4 KW3 sing 201 n n 
O9 P1 KW3 sing 202 n n 
C24 C25 KW3 doub 203 n y 
O6 P1 KW3 sing 204 n n 
O4 C15 KW3 sing 205 n n 
C26 C25 KW3 sing 206 n y 
C27 C20 KW3 doub 207 n y 
C27 C16 KW3 sing 208 n y 
C20 C19 KW3 sing 209 n y 
P1 O7 KW3 doub 210 n n 
P1 O8 KW3 sing 211 n n 
C15 C16 KW3 sing 212 n n 
C16 C17 KW3 doub 213 n y 
C19 C18 KW3 doub 214 n y 
C17 C18 KW3 sing 215 n y 
C13 H1 KW3 sing 216 n n 
C12 H2 KW3 sing 217 n n 
C25 H3 KW3 sing 218 n n 
C10 H4 KW3 sing 219 n n 
C7 H5 KW3 sing 220 n n 
C7 H6 KW3 sing 221 n n 
C4 H7 KW3 sing 222 n n 
C3 H8 KW3 sing 223 n n 
C3 H9 KW3 sing 224 n n 
C2 H10 KW3 sing 225 n n 
C2 H11 KW3 sing 226 n n 
C1 H12 KW3 sing 227 n n 
C1 H13 KW3 sing 228 n n 
C1 H14 KW3 sing 229 n n 
C5 H15 KW3 sing 230 n n 
C5 H16 KW3 sing 231 n n 
C8 H17 KW3 sing 232 n n 
C8 H18 KW3 sing 233 n n 
C11 H19 KW3 sing 234 n n 
C15 H20 KW3 sing 235 n n 
C15 H21 KW3 sing 236 n n 
C17 H22 KW3 sing 237 n n 
C18 H23 KW3 sing 238 n n 
C19 H24 KW3 sing 239 n n 
C22 H25 KW3 sing 240 n n 
C23 H26 KW3 sing 241 n n 
C24 H27 KW3 sing 242 n n 
C26 H28 KW3 sing 243 n n 
C27 H29 KW3 sing 244 n n 
C28 H31 KW3 sing 245 n n 
C28 H32 KW3 sing 246 n n 
C29 H33 KW3 sing 247 n n 
N1 H34 KW3 sing 248 n n 
N1 H35 KW3 sing 249 n n 
O11 H37 KW3 sing 250 n n 
O8 H30 KW3 sing 251 n n 
#
_atom_sites.entry_id                     8XBH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           KW3 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      401 
_pdbx_nonpoly_scheme.auth_seq_num     401 
_pdbx_nonpoly_scheme.pdb_mon_id       KW3 
_pdbx_nonpoly_scheme.auth_mon_id      M11 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C30 KW3 . . . F 6 112.926 107.695 147.453 1 70.95 ? C30 KW3 401 R 1 
HETATM 2 C C13 KW3 . . . F 6 113.226 101.413 138.68 1 70.95 ? C13 KW3 401 R 1 
HETATM 3 C C12 KW3 . . . F 6 114.376 100.699 138.957 1 70.95 ? C12 KW3 401 R 1 
HETATM 4 C C25 KW3 . . . F 6 115.255 105.863 131.38 1 70.95 ? C25 KW3 401 R 1 
HETATM 5 C C10 KW3 . . . F 6 115.142 102.469 140.355 1 70.95 ? C10 KW3 401 R 1 
HETATM 6 C C7 KW3 . . . F 6 114.513 104.726 142.071 1 70.95 ? C7 KW3 401 R 1 
HETATM 7 C C4 KW3 . . . F 6 110.608 104.872 144.676 1 70.95 ? C4 KW3 401 R 1 
HETATM 8 C C3 KW3 . . . F 6 109.679 104.817 143.483 1 70.95 ? C3 KW3 401 R 1 
HETATM 9 C C2 KW3 . . . F 6 108.465 102.772 143.892 1 70.95 ? C2 KW3 401 R 1 
HETATM 10 C C1 KW3 . . . F 6 108.265 101.411 143.376 1 70.95 ? C1 KW3 401 R 1 
HETATM 11 O O1 KW3 . . . F 6 109.402 103.478 143.087 1 70.95 ? O1 KW3 401 R 1 
HETATM 12 C C5 KW3 . . . F 6 111.853 104.028 144.52 1 70.95 ? C5 KW3 401 R 1 
HETATM 13 O O2 KW3 . . . F 6 112.599 104.55 143.4 1 70.95 ? O2 KW3 401 R 1 
HETATM 14 C C6 KW3 . . . F 6 113.799 104.022 143.188 1 70.95 ? C6 KW3 401 R 1 
HETATM 15 O O3 KW3 . . . F 6 114.243 103.109 143.833 1 70.95 ? O3 KW3 401 R 1 
HETATM 16 C C8 KW3 . . . F 6 113.816 104.586 140.73 1 70.95 ? C8 KW3 401 R 1 
HETATM 17 C C9 KW3 . . . F 6 114.001 103.215 140.099 1 70.95 ? C9 KW3 401 R 1 
HETATM 18 C C11 KW3 . . . F 6 115.334 101.221 139.792 1 70.95 ? C11 KW3 401 R 1 
HETATM 19 C C14 KW3 . . . F 6 113.04 102.672 139.23 1 70.95 ? C14 KW3 401 R 1 
HETATM 20 O O4 KW3 . . . F 6 111.894 103.399 138.984 1 70.95 ? O4 KW3 401 R 1 
HETATM 21 C C15 KW3 . . . F 6 111.922 104.462 138.02 1 70.95 ? C15 KW3 401 R 1 
HETATM 22 C C16 KW3 . . . F 6 112.421 103.996 136.683 1 70.95 ? C16 KW3 401 R 1 
HETATM 23 C C17 KW3 . . . F 6 111.605 103.268 135.829 1 70.95 ? C17 KW3 401 R 1 
HETATM 24 C C18 KW3 . . . F 6 112.074 102.859 134.596 1 70.95 ? C18 KW3 401 R 1 
HETATM 25 C C19 KW3 . . . F 6 113.354 103.183 134.188 1 70.95 ? C19 KW3 401 R 1 
HETATM 26 C C20 KW3 . . . F 6 114.159 103.913 135.035 1 70.95 ? C20 KW3 401 R 1 
HETATM 27 O O5 KW3 . . . F 6 115.454 104.268 134.669 1 70.95 ? O5 KW3 401 R 1 
HETATM 28 C C21 KW3 . . . F 6 115.759 104.659 133.369 1 70.95 ? C21 KW3 401 R 1 
HETATM 29 C C22 KW3 . . . F 6 116.966 104.266 132.839 1 70.95 ? C22 KW3 401 R 1 
HETATM 30 C C23 KW3 . . . F 6 117.296 104.659 131.552 1 70.95 ? C23 KW3 401 R 1 
HETATM 31 C C24 KW3 . . . F 6 116.443 105.455 130.825 1 70.95 ? C24 KW3 401 R 1 
HETATM 32 C C26 KW3 . . . F 6 114.906 105.477 132.663 1 70.95 ? C26 KW3 401 R 1 
HETATM 33 C C27 KW3 . . . F 6 113.697 104.327 136.269 1 70.95 ? C27 KW3 401 R 1 
HETATM 34 O O6 KW3 . . . F 6 109.894 104.503 145.906 1 70.95 ? O6 KW3 401 R 1 
HETATM 35 P P1 KW3 . . . F 6 109.04 105.587 146.726 1 70.95 ? P1 KW3 401 R 1 
HETATM 36 O O7 KW3 . . . F 6 108.179 106.357 145.762 1 70.95 ? O7 KW3 401 R 1 
HETATM 37 O O8 KW3 . . . F 6 108.403 104.884 147.892 1 70.95 ? O8 KW3 401 R 1 
HETATM 38 O O9 KW3 . . . F 6 110.176 106.564 147.302 1 70.95 ? O9 KW3 401 R 1 
HETATM 39 C C28 KW3 . . . F 6 111.18 106.024 148.194 1 70.95 ? C28 KW3 401 R 1 
HETATM 40 C C29 KW3 . . . F 6 112.101 107.147 148.623 1 70.95 ? C29 KW3 401 R 1 
HETATM 41 N N1 KW3 . . . F 6 111.308 108.243 149.241 1 70.95 ? N1 KW3 401 R 1 
HETATM 42 O O10 KW3 . . . F 6 113.681 106.896 146.866 1 70.95 ? O10 KW3 401 R 1 
HETATM 43 O O11 KW3 . . . F 6 112.786 108.901 147.174 1 70.95 ? O11 KW3 401 R 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           43 
#