data_8XDD
#
_model_server_result.job_id            DmIUPnsLl-BB2bjERngbYQ 
_model_server_result.datetime_utc      '2024-12-23 07:59:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xdd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    8XDD 
#
_exptl.entry_id    8XDD 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              189.167 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '8-hydroxyquinoline-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 F N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 D C02 8HC . A 8HC 401 1_555 E N SZ4 . A SZ4 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
covale ? covale2 F C02 8HC . B 8HC 401 1_555 G N SZ4 . B SZ4 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
covale ? covale3 H C02 8HC . C 8HC 401 1_555 I N SZ4 . C SZ4 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
#
_chem_comp.formula           'C10 H7 N O3' 
_chem_comp.formula_weight    189.167 
_chem_comp.id                8HC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '8-hydroxyquinoline-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 C14 8HC doub 1 n y 
C13 C07 8HC sing 2 n y 
C14 C04 8HC sing 3 n y 
C08 C07 8HC doub 4 n y 
C08 C09 8HC sing 5 n y 
C07 C06 8HC sing 6 n y 
O01 C02 8HC doub 7 n n 
C04 C02 8HC sing 8 n n 
C04 N05 8HC doub 9 n y 
C09 C10 8HC doub 10 n y 
C02 O03 8HC sing 11 n n 
C06 N05 8HC sing 12 n y 
C06 C11 8HC doub 13 n y 
C10 C11 8HC sing 14 n y 
C11 O12 8HC sing 15 n n 
O03 H1 8HC sing 16 n n 
C08 H081 8HC sing 17 n n 
C09 H091 8HC sing 18 n n 
C10 H101 8HC sing 19 n n 
O12 H121 8HC sing 20 n n 
C13 H131 8HC sing 21 n n 
C14 H141 8HC sing 22 n n 
#
_atom_sites.entry_id                     8XDD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 8HC A 1 401 401 8HC LIG . 
E 3 SZ4 A 1 402 401 SZ4 LIG . 
F 2 8HC B 1 401 401 8HC LIG . 
G 3 SZ4 B 1 402 401 SZ4 LIG . 
H 2 8HC C 1 401 401 8HC LIG . 
I 3 SZ4 C 1 402 401 SZ4 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O01 8HC . . . D 2 111.561 132.639 127.506 1 20 0 O01 8HC 401 A 1 
HETATM 2 C C02 8HC . . . D 2 110.8 132.475 128.398 1 20 0 C02 8HC 401 A 1 
HETATM 3 C C04 8HC . . . D 2 109.414 131.912 128.122 1 20 0 C04 8HC 401 A 1 
HETATM 4 N N05 8HC . . . D 2 108.623 131.554 129.153 1 20 0 N05 8HC 401 A 1 
HETATM 5 C C06 8HC . . . D 2 107.395 131.052 128.914 1 20 0 C06 8HC 401 A 1 
HETATM 6 C C07 8HC . . . D 2 106.945 130.904 127.615 1 20 0 C07 8HC 401 A 1 
HETATM 7 C C08 8HC . . . D 2 105.684 130.389 127.376 1 20 0 C08 8HC 401 A 1 
HETATM 8 C C09 8HC . . . D 2 104.874 130.024 128.436 1 20 0 C09 8HC 401 A 1 
HETATM 9 C C10 8HC . . . D 2 105.325 130.173 129.736 1 20 0 C10 8HC 401 A 1 
HETATM 10 C C11 8HC . . . D 2 106.587 130.688 129.974 1 20 0 C11 8HC 401 A 1 
HETATM 11 O O12 8HC . . . D 2 107.049 130.841 131.285 1 20 0 O12 8HC 401 A 1 
HETATM 12 C C13 8HC . . . D 2 107.739 131.262 126.58 1 20 0 C13 8HC 401 A 1 
HETATM 13 C C14 8HC . . . D 2 108.972 131.765 126.82 1 20 0 C14 8HC 401 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           221 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           13 
#