data_8XDD
#
_model_server_result.job_id            L6pLf20xKmHYl0jFS6qcUQ 
_model_server_result.datetime_utc      '2024-12-23 07:41:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xdd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":402}' 
#
_entry.id    8XDD 
#
_exptl.entry_id    8XDD 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              137.179 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(3-methoxyphenyl)methanamine 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 D C02 8HC . A 8HC 401 1_555 E N SZ4 . A SZ4 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
covale ? covale2 F C02 8HC . B 8HC 401 1_555 G N SZ4 . B SZ4 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
covale ? covale3 H C02 8HC . C 8HC 401 1_555 I N SZ4 . C SZ4 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
#
_chem_comp.formula           'C8 H11 N O' 
_chem_comp.formula_weight    137.179 
_chem_comp.id                SZ4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(3-methoxyphenyl)methanamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C1 SZ4 sing 310 n n 
O C6 SZ4 sing 311 n n 
O C7 SZ4 sing 312 n n 
C1 C2 SZ4 sing 313 n n 
C2 C3 SZ4 doub 314 n y 
C2 C8 SZ4 sing 315 n y 
C3 C4 SZ4 sing 316 n y 
C4 C5 SZ4 doub 317 n y 
C5 C6 SZ4 sing 318 n y 
C6 C8 SZ4 doub 319 n y 
N HN SZ4 sing 320 n n 
N HNA SZ4 sing 321 n n 
C1 H1 SZ4 sing 322 n n 
C1 H1A SZ4 sing 323 n n 
C3 H3 SZ4 sing 324 n n 
C4 H4 SZ4 sing 325 n n 
C5 H5 SZ4 sing 326 n n 
C7 H7 SZ4 sing 327 n n 
C7 H7A SZ4 sing 328 n n 
C7 H7B SZ4 sing 329 n n 
C8 H8 SZ4 sing 330 n n 
#
_atom_sites.entry_id                     8XDD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 8HC A 1 401 401 8HC LIG . 
E 3 SZ4 A 1 402 401 SZ4 LIG . 
F 2 8HC B 1 401 401 8HC LIG . 
G 3 SZ4 B 1 402 401 SZ4 LIG . 
H 2 8HC C 1 401 401 8HC LIG . 
I 3 SZ4 C 1 402 401 SZ4 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SZ4 . . . I 3 134.286 116.691 129.752 1 20 0 N SZ4 402 C 1 
HETATM 2 O O SZ4 . . . I 3 138.366 113.18 128.83 1 20 0 O SZ4 402 C 1 
HETATM 3 C C1 SZ4 . . . I 3 134.079 115.278 129.993 1 20 0 C1 SZ4 402 C 1 
HETATM 4 C C2 SZ4 . . . I 3 135.391 114.629 130.413 1 20 0 C2 SZ4 402 C 1 
HETATM 5 C C3 SZ4 . . . I 3 135.691 114.464 131.753 1 20 0 C3 SZ4 402 C 1 
HETATM 6 C C4 SZ4 . . . I 3 136.885 113.87 132.124 1 20 0 C4 SZ4 402 C 1 
HETATM 7 C C5 SZ4 . . . I 3 137.775 113.442 131.154 1 20 0 C5 SZ4 402 C 1 
HETATM 8 C C6 SZ4 . . . I 3 137.472 113.609 129.815 1 20 0 C6 SZ4 402 C 1 
HETATM 9 C C7 SZ4 . . . I 3 137.935 113.443 127.526 1 20 0 C7 SZ4 402 C 1 
HETATM 10 C C8 SZ4 . . . I 3 136.279 114.201 129.444 1 20 0 C8 SZ4 402 C 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           10 
#