data_8XDN # _model_server_result.job_id YIGjuWfhlTfRikyZiof2Pg _model_server_result.datetime_utc '2025-09-12 19:23:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8xdn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":401}' # _entry.id 8XDN # _exptl.entry_id 8XDN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 180.156 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-fructose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8XDN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8XDN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id FUD _chem_comp.mon_nstd_flag . _chem_comp.name D-fructose _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FUD sing 83 n n C1 O1 FUD sing 84 n n C2 C3 FUD sing 85 n n C2 O2 FUD doub 86 n n C3 C4 FUD sing 87 n n C3 O3 FUD sing 88 n n C4 C5 FUD sing 89 n n C4 O4 FUD sing 90 n n C5 C6 FUD sing 91 n n C5 O5 FUD sing 92 n n C6 O6 FUD sing 93 n n C1 H11 FUD sing 94 n n C1 H12 FUD sing 95 n n C3 H3 FUD sing 96 n n C4 H4 FUD sing 97 n n C5 H5 FUD sing 98 n n C6 H61 FUD sing 99 n n C6 H62 FUD sing 100 n n O1 HO1 FUD sing 101 n n O3 HO3 FUD sing 102 n n O4 HO4 FUD sing 103 n n O5 HO5 FUD sing 104 n n O6 HO6 FUD sing 105 n n # _atom_sites.entry_id 8XDN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 6 FUD A 1 401 403 FUD FUD . L 7 PC1 C 1 201 402 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FUD . . . K 6 153.883 129.048 139.814 1 70.77 ? C1 FUD 401 A 1 HETATM 2 C C2 FUD . . . K 6 153.652 129.916 141.015 1 71.39 ? C2 FUD 401 A 1 HETATM 3 C C3 FUD . . . K 6 152.277 129.879 141.65 1 67.24 ? C3 FUD 401 A 1 HETATM 4 C C4 FUD . . . K 6 151.245 130.664 140.836 1 68.03 ? C4 FUD 401 A 1 HETATM 5 C C5 FUD . . . K 6 149.868 130.731 141.523 1 62.63 ? C5 FUD 401 A 1 HETATM 6 C C6 FUD . . . K 6 148.724 130.669 140.524 1 57.62 ? C6 FUD 401 A 1 HETATM 7 O O1 FUD . . . K 6 154.945 128.188 140.091 1 70.71 ? O1 FUD 401 A 1 HETATM 8 O O2 FUD . . . K 6 154.513 130.614 141.49 1 73.8 ? O2 FUD 401 A 1 HETATM 9 O O3 FUD . . . K 6 152.358 130.404 142.937 1 71.29 ? O3 FUD 401 A 1 HETATM 10 O O4 FUD . . . K 6 151.73 131.953 140.557 1 65.64 ? O4 FUD 401 A 1 HETATM 11 O O5 FUD . . . K 6 149.758 129.749 142.517 1 65.02 ? O5 FUD 401 A 1 HETATM 12 O O6 FUD . . . K 6 147.512 130.881 141.206 1 48.19 ? O6 FUD 401 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #