data_8XF4
#
_model_server_result.job_id            pji_dLsoVpFWrHI9sb7bLg 
_model_server_result.datetime_utc      '2024-11-22 17:31:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xf4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    8XF4 
#
_exptl.entry_id    8XF4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              400.47 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,12-bis(oxidanyl)-1,6,12,17-tetrazacyclodocosane-2,5,13,16-tetrone 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8XF4 
_cell.length_a            59.974 
_cell.length_b            62.099 
_cell.length_c            67.926 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8XF4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O10 OX8 . A OX8 401 1_555 D FE FE . A FE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.861 ? 
metalc ? metalc2 B O28 OX8 . A OX8 401 1_555 D FE FE . A FE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
metalc ? metalc3 B O23 OX8 . A OX8 401 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc4 B O27 OX8 . A OX8 401 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? 
metalc ? metalc5 C N11 OX8 . A OX8 402 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? 
metalc ? metalc6 C O10 OX8 . A OX8 402 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc7 C O23 OX8 . A OX8 402 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc8 C O27 OX8 . A OX8 402 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? 
metalc ? metalc9 C O28 OX8 . A OX8 402 1_555 E FE FE . A FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
#
_chem_comp.formula           'C18 H32 N4 O6' 
_chem_comp.formula_weight    400.47 
_chem_comp.id                OX8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,12-bis(oxidanyl)-1,6,12,17-tetrazacyclodocosane-2,5,13,16-tetrone 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C02 OX8 sing 224 n n 
C01 C26 OX8 sing 225 n n 
C03 C02 OX8 sing 226 n n 
C03 N04 OX8 sing 227 n n 
C26 C25 OX8 sing 228 n n 
N04 C05 OX8 sing 229 n n 
C25 N24 OX8 sing 230 n n 
O19 C18 OX8 doub 231 n n 
O06 C05 OX8 doub 232 n n 
C05 C07 OX8 sing 233 n n 
C20 C18 OX8 sing 234 n n 
C20 C21 OX8 sing 235 n n 
N24 O27 OX8 sing 236 n n 
N24 C22 OX8 sing 237 n n 
C18 N17 OX8 sing 238 n n 
C21 C22 OX8 sing 239 n n 
C07 C08 OX8 sing 240 n n 
C15 C14 OX8 sing 241 n n 
C15 C16 OX8 sing 242 n n 
C22 O23 OX8 doub 243 n n 
N17 C16 OX8 sing 244 n n 
C14 C13 OX8 sing 245 n n 
C08 C09 OX8 sing 246 n n 
C09 O10 OX8 doub 247 n n 
C09 N11 OX8 sing 248 n n 
C12 N11 OX8 sing 249 n n 
C12 C13 OX8 sing 250 n n 
N11 O28 OX8 sing 251 n n 
C13 H1 OX8 sing 252 n n 
C13 H2 OX8 sing 253 n n 
C15 H3 OX8 sing 254 n n 
C15 H4 OX8 sing 255 n n 
C20 H5 OX8 sing 256 n n 
C20 H6 OX8 sing 257 n n 
C21 H7 OX8 sing 258 n n 
C21 H8 OX8 sing 259 n n 
C26 H9 OX8 sing 260 n n 
C26 H10 OX8 sing 261 n n 
C01 H11 OX8 sing 262 n n 
C01 H12 OX8 sing 263 n n 
C02 H13 OX8 sing 264 n n 
C02 H14 OX8 sing 265 n n 
C03 H15 OX8 sing 266 n n 
C03 H16 OX8 sing 267 n n 
C07 H17 OX8 sing 268 n n 
C07 H18 OX8 sing 269 n n 
C08 H19 OX8 sing 270 n n 
C08 H20 OX8 sing 271 n n 
C12 H21 OX8 sing 272 n n 
C12 H22 OX8 sing 273 n n 
C14 H23 OX8 sing 274 n n 
C14 H24 OX8 sing 275 n n 
C16 H25 OX8 sing 276 n n 
C16 H26 OX8 sing 277 n n 
C25 H27 OX8 sing 278 n n 
C25 H28 OX8 sing 279 n n 
N04 H29 OX8 sing 280 n n 
N17 H30 OX8 sing 281 n n 
O27 H31 OX8 sing 282 n n 
O28 H32 OX8 sing 283 n n 
#
_atom_sites.entry_id                     8XF4 
_atom_sites.fract_transf_matrix[1][1]    0.016674 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016103 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014722 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OX8 A 1 401 1 OX8 BIS . 
C 2 OX8 A 1 402 2 OX8 BIS . 
D 3 FE A 1 403 3 FE FE . 
E 3 FE A 1 404 4 FE FE . 
F 4 HOH A 1 501 48 HOH HOH . 
F 4 HOH A 2 502 35 HOH HOH . 
F 4 HOH A 3 503 44 HOH HOH . 
F 4 HOH A 4 504 6 HOH HOH . 
F 4 HOH A 5 505 62 HOH HOH . 
F 4 HOH A 6 506 59 HOH HOH . 
F 4 HOH A 7 507 80 HOH HOH . 
F 4 HOH A 8 508 31 HOH HOH . 
F 4 HOH A 9 509 12 HOH HOH . 
F 4 HOH A 10 510 27 HOH HOH . 
F 4 HOH A 11 511 43 HOH HOH . 
F 4 HOH A 12 512 19 HOH HOH . 
F 4 HOH A 13 513 55 HOH HOH . 
F 4 HOH A 14 514 32 HOH HOH . 
F 4 HOH A 15 515 93 HOH HOH . 
F 4 HOH A 16 516 28 HOH HOH . 
F 4 HOH A 17 517 39 HOH HOH . 
F 4 HOH A 18 518 76 HOH HOH . 
F 4 HOH A 19 519 16 HOH HOH . 
F 4 HOH A 20 520 73 HOH HOH . 
F 4 HOH A 21 521 77 HOH HOH . 
F 4 HOH A 22 522 42 HOH HOH . 
F 4 HOH A 23 523 37 HOH HOH . 
F 4 HOH A 24 524 88 HOH HOH . 
F 4 HOH A 25 525 33 HOH HOH . 
F 4 HOH A 26 526 5 HOH HOH . 
F 4 HOH A 27 527 50 HOH HOH . 
F 4 HOH A 28 528 21 HOH HOH . 
F 4 HOH A 29 529 72 HOH HOH . 
F 4 HOH A 30 530 74 HOH HOH . 
F 4 HOH A 31 531 15 HOH HOH . 
F 4 HOH A 32 532 11 HOH HOH . 
F 4 HOH A 33 533 24 HOH HOH . 
F 4 HOH A 34 534 3 HOH HOH . 
F 4 HOH A 35 535 8 HOH HOH . 
F 4 HOH A 36 536 13 HOH HOH . 
F 4 HOH A 37 537 9 HOH HOH . 
F 4 HOH A 38 538 22 HOH HOH . 
F 4 HOH A 39 539 91 HOH HOH . 
F 4 HOH A 40 540 89 HOH HOH . 
F 4 HOH A 41 541 26 HOH HOH . 
F 4 HOH A 42 542 69 HOH HOH . 
F 4 HOH A 43 543 85 HOH HOH . 
F 4 HOH A 44 544 82 HOH HOH . 
F 4 HOH A 45 545 87 HOH HOH . 
F 4 HOH A 46 546 14 HOH HOH . 
F 4 HOH A 47 547 68 HOH HOH . 
F 4 HOH A 48 548 70 HOH HOH . 
F 4 HOH A 49 549 45 HOH HOH . 
F 4 HOH A 50 550 65 HOH HOH . 
F 4 HOH A 51 551 10 HOH HOH . 
F 4 HOH A 52 552 66 HOH HOH . 
F 4 HOH A 53 553 41 HOH HOH . 
F 4 HOH A 54 554 83 HOH HOH . 
F 4 HOH A 55 555 67 HOH HOH . 
F 4 HOH A 56 556 47 HOH HOH . 
F 4 HOH A 57 557 1 HOH HOH . 
F 4 HOH A 58 558 2 HOH HOH . 
F 4 HOH A 59 559 64 HOH HOH . 
F 4 HOH A 60 560 54 HOH HOH . 
F 4 HOH A 61 561 92 HOH HOH . 
F 4 HOH A 62 562 53 HOH HOH . 
F 4 HOH A 63 563 52 HOH HOH . 
F 4 HOH A 64 564 40 HOH HOH . 
F 4 HOH A 65 565 29 HOH HOH . 
F 4 HOH A 66 566 36 HOH HOH . 
F 4 HOH A 67 567 49 HOH HOH . 
F 4 HOH A 68 568 71 HOH HOH . 
F 4 HOH A 69 569 75 HOH HOH . 
F 4 HOH A 70 570 61 HOH HOH . 
F 4 HOH A 71 571 34 HOH HOH . 
F 4 HOH A 72 572 4 HOH HOH . 
F 4 HOH A 73 573 7 HOH HOH . 
F 4 HOH A 74 574 25 HOH HOH . 
F 4 HOH A 75 575 46 HOH HOH . 
F 4 HOH A 76 576 56 HOH HOH . 
F 4 HOH A 77 577 17 HOH HOH . 
F 4 HOH A 78 578 78 HOH HOH . 
F 4 HOH A 79 579 20 HOH HOH . 
F 4 HOH A 80 580 84 HOH HOH . 
F 4 HOH A 81 581 18 HOH HOH . 
F 4 HOH A 82 582 81 HOH HOH . 
F 4 HOH A 83 583 57 HOH HOH . 
F 4 HOH A 84 584 90 HOH HOH . 
F 4 HOH A 85 585 58 HOH HOH . 
F 4 HOH A 86 586 23 HOH HOH . 
F 4 HOH A 87 587 86 HOH HOH . 
F 4 HOH A 88 588 63 HOH HOH . 
F 4 HOH A 89 589 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 OX8 . . . C 2 9.899 10.35 9.179 1 37.71 0 C13 OX8 402 A 1 
HETATM 2 C C15 OX8 . . . C 2 8.909 10 6.927 1 43.06 0 C15 OX8 402 A 1 
HETATM 3 C C20 OX8 . . . C 2 7.335 5.706 6.432 1 46.12 0 C20 OX8 402 A 1 
HETATM 4 C C21 OX8 . . . C 2 7.063 4.774 7.596 1 44.09 0 C21 OX8 402 A 1 
HETATM 5 C C22 OX8 . . . C 2 8.302 4.762 8.483 1 39.01 0 C22 OX8 402 A 1 
HETATM 6 C C26 OX8 . . . C 2 10.057 1.445 7.748 1 54.35 0 C26 OX8 402 A 1 
HETATM 7 C C01 OX8 . . . C 2 10.68 1.492 6.339 1 56.74 0 C01 OX8 402 A 1 
HETATM 8 C C02 OX8 . . . C 2 10.39 2.745 5.505 1 57.56 0 C02 OX8 402 A 1 
HETATM 9 C C03 OX8 . . . C 2 11.496 3.105 4.505 1 54.36 0 C03 OX8 402 A 1 
HETATM 10 C C05 OX8 . . . C 2 11.867 5.57 5.131 1 57.48 0 C05 OX8 402 A 1 
HETATM 11 C C07 OX8 . . . C 2 12.773 6.643 5.759 1 53.94 0 C07 OX8 402 A 1 
HETATM 12 C C08 OX8 . . . C 2 12.042 7.634 6.7 1 51.43 0 C08 OX8 402 A 1 
HETATM 13 C C09 OX8 . . . C 2 11.479 7.085 8.065 1 45.05 0 C09 OX8 402 A 1 
HETATM 14 C C12 OX8 . . . C 2 11.157 9.518 8.94 1 39.78 0 C12 OX8 402 A 1 
HETATM 15 C C14 OX8 . . . C 2 8.68 9.832 8.418 1 39.14 0 C14 OX8 402 A 1 
HETATM 16 C C16 OX8 . . . C 2 7.728 9.526 6.097 1 46.88 0 C16 OX8 402 A 1 
HETATM 17 C C18 OX8 . . . C 2 7.093 7.18 6.745 1 49.85 0 C18 OX8 402 A 1 
HETATM 18 C C25 OX8 . . . C 2 8.802 2.288 8.044 1 48.91 0 C25 OX8 402 A 1 
HETATM 19 N N04 OX8 . . . C 2 12.314 4.168 5.066 1 56.95 0 N04 OX8 402 A 1 
HETATM 20 N N11 OX8 . . . C 2 11.031 8.044 9.143 1 40.74 0 N11 OX8 402 A 1 
HETATM 21 N N17 OX8 . . . C 2 7.847 8.099 5.911 1 48.28 0 N17 OX8 402 A 1 
HETATM 22 N N24 OX8 . . . C 2 9.096 3.589 8.681 1 42.01 0 N24 OX8 402 A 1 
HETATM 23 O O06 OX8 . . . C 2 10.804 5.898 4.718 1 60 0 O06 OX8 402 A 1 
HETATM 24 O O10 OX8 . . . C 2 11.42 5.89 8.213 1 35.97 0 O10 OX8 402 A 1 
HETATM 25 O O19 OX8 . . . C 2 6.35 7.567 7.613 1 51.24 0 O19 OX8 402 A 1 
HETATM 26 O O23 OX8 . . . C 2 8.648 5.744 9.058 1 36.42 0 O23 OX8 402 A 1 
HETATM 27 O O27 OX8 . . . C 2 10.182 3.8 9.532 1 38.79 0 O27 OX8 402 A 1 
HETATM 28 O O28 OX8 . . . C 2 10.536 7.632 10.404 1 35.96 0 O28 OX8 402 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           28 
#