data_8XGY
#
_model_server_result.job_id            CVU9MUG6SCJLXhpOs-TEPw 
_model_server_result.datetime_utc      '2024-12-18 10:12:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xgy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":401}' 
#
_entry.id    8XGY 
#
_exptl.entry_id    8XGY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8XGY 
_cell.length_a            83.722 
_cell.length_b            217.245 
_cell.length_c            242.303 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8XGY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,KA,LA,MA,NA,OA,PA,QA,RA,SA 1 1 
L,IA,JA,TA 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_554 -x+1/2,-y,z-1/2 -1 0 0 0 -1 0 0 0 1 41.861 0 -121.1515 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 M N N 
? 2 O N N 
? 2 Q N N 
? 2 S N N 
? 2 U N N 
? 2 W N N 
? 2 Y N N 
? 2 AA N N 
? 2 CA N N 
? 2 EA N N 
? 2 GA N N 
? 2 IA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 298 B HIS 330 1_555 M ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? 
metalc ? metalc2 M ZN ZN . B ZN 401 1_555 N N26 A1D5C . B A1D5C 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc3 B NE2 HIS 298 A HIS 330 1_555 O ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.785 ? 
metalc ? metalc4 O ZN ZN . A ZN 401 1_555 P N26 A1D5C . A A1D5C 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? 
metalc ? metalc5 C NE2 HIS 298 C HIS 330 1_555 Q ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.847 ? 
metalc ? metalc6 D NE2 HIS 298 D HIS 330 1_555 S ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? 
metalc ? metalc7 S ZN ZN . D ZN 401 1_555 T N26 A1D5C . D A1D5C 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? 
metalc ? metalc8 E NE2 HIS 298 E HIS 330 1_555 U ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? 
metalc ? metalc9 U ZN ZN . E ZN 401 1_555 V N26 A1D5C . E A1D5C 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.711 ? 
metalc ? metalc10 F NE2 HIS 298 F HIS 330 1_555 W ZN ZN . F ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? 
metalc ? metalc11 W ZN ZN . F ZN 401 1_555 X N26 A1D5C . F A1D5C 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.733 ? 
metalc ? metalc12 G OE2 GLU 170 G GLU 202 1_555 Y ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.742 ? 
metalc ? metalc13 G NE2 HIS 298 G HIS 330 1_555 Y ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? 
metalc ? metalc14 Y ZN ZN . G ZN 401 1_555 Z N26 A1D5C . G A1D5C 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? 
metalc ? metalc15 H NE2 HIS 298 H HIS 330 1_555 AA ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.783 ? 
metalc ? metalc16 I NE2 HIS 298 I HIS 330 1_555 CA ZN ZN . I ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.706 ? 
metalc ? metalc17 CA ZN ZN . I ZN 401 1_555 DA N26 A1D5C . I A1D5C 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.731 ? 
metalc ? metalc18 J OD2 ASP 127 J ASP 159 1_555 EA ZN ZN . J ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? 
metalc ? metalc19 J OE2 GLU 170 J GLU 202 1_555 EA ZN ZN . J ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.725 ? 
metalc ? metalc20 J NE2 HIS 298 J HIS 330 1_555 EA ZN ZN . J ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? 
metalc ? metalc21 K OE2 GLU 170 K GLU 202 1_555 GA ZN ZN . K ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? 
metalc ? metalc22 K NE2 HIS 298 K HIS 330 1_555 GA ZN ZN . K ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8XGY 
_atom_sites.fract_transf_matrix[1][1]    0.011944 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004603 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004127 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 2 ZN B 1 401 1 ZN ZN . 
N 3 A1D5C B 1 402 1 A1D5C M24 . 
O 2 ZN A 1 401 2 ZN ZN . 
P 3 A1D5C A 1 402 2 A1D5C M24 . 
Q 2 ZN C 1 401 3 ZN ZN . 
R 3 A1D5C C 1 402 3 A1D5C M24 . 
S 2 ZN D 1 401 4 ZN ZN . 
T 3 A1D5C D 1 402 4 A1D5C M24 . 
U 2 ZN E 1 401 5 ZN ZN . 
V 3 A1D5C E 1 402 5 A1D5C M24 . 
W 2 ZN F 1 401 6 ZN ZN . 
X 3 A1D5C F 1 402 6 A1D5C M24 . 
Y 2 ZN G 1 401 7 ZN ZN . 
Z 3 A1D5C G 1 402 7 A1D5C M24 . 
AA 2 ZN H 1 401 8 ZN ZN . 
BA 3 A1D5C H 1 402 8 A1D5C M24 . 
CA 2 ZN I 1 401 9 ZN ZN . 
DA 3 A1D5C I 1 402 9 A1D5C M24 . 
EA 2 ZN J 1 401 10 ZN ZN . 
FA 3 A1D5C J 1 402 10 A1D5C M24 . 
GA 2 ZN K 1 401 11 ZN ZN . 
HA 3 A1D5C K 1 402 11 A1D5C M24 . 
IA 2 ZN L 1 401 12 ZN ZN . 
JA 3 A1D5C L 1 402 12 A1D5C M24 . 
KA 4 HOH B 1 501 35 HOH HOH . 
KA 4 HOH B 2 502 15 HOH HOH . 
KA 4 HOH B 3 503 89 HOH HOH . 
KA 4 HOH B 4 504 9 HOH HOH . 
KA 4 HOH B 5 505 21 HOH HOH . 
LA 4 HOH A 1 501 25 HOH HOH . 
MA 4 HOH C 1 501 4 HOH HOH . 
MA 4 HOH C 2 502 12 HOH HOH . 
MA 4 HOH C 3 503 44 HOH HOH . 
NA 4 HOH D 1 501 77 HOH HOH . 
OA 4 HOH E 1 501 3 HOH HOH . 
OA 4 HOH E 2 502 42 HOH HOH . 
PA 4 HOH F 1 501 63 HOH HOH . 
PA 4 HOH F 2 502 34 HOH HOH . 
PA 4 HOH F 3 503 10 HOH HOH . 
QA 4 HOH G 1 501 65 HOH HOH . 
RA 4 HOH H 1 501 6 HOH HOH . 
SA 4 HOH K 1 501 74 HOH HOH . 
SA 4 HOH K 2 502 8 HOH HOH . 
SA 4 HOH K 3 503 56 HOH HOH . 
TA 4 HOH L 1 501 5 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               2.631 
_atom_site.Cartn_y               -15.966 
_atom_site.Cartn_z               -5.441 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        31.09 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           42 
_model_server_stats.create_model_time_ms    327 
_model_server_stats.query_time_ms           394 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#