data_8XIF # _model_server_result.job_id CS1sOAmjvcbDO-gSx5C1Cw _model_server_result.datetime_utc '2024-10-11 02:25:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8xif # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8XIF # _exptl.entry_id 8XIF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8XIF _cell.length_a 52.47 _cell.length_b 56.62 _cell.length_c 74.16 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8XIF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 70 A ASP 70 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 A OD1 ASP 70 A ASP 70 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc3 A OD2 ASP 72 A ASP 72 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc4 A OD1 ASP 72 A ASP 72 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc5 A OD2 ASP 170 A ASP 170 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc6 B O31 PPV . A PPV 301 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc7 B O22 PPV . A PPV 301 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc8 C MG MG . A MG 302 1_555 E O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc9 C MG MG . A MG 302 1_555 E O HOH . A HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc10 C MG MG . A MG 302 1_555 E O HOH . A HOH 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc11 D MG MG . A MG 303 1_555 E O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc12 D MG MG . A MG 303 1_555 E O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8XIF _atom_sites.fract_transf_matrix[1][1] 0.019059 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013484 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PPV A 1 301 301 PPV PPV . C 3 MG A 1 302 1 MG MG . D 3 MG A 1 303 2 MG MG . E 4 HOH A 1 401 124 HOH HOH . E 4 HOH A 2 402 172 HOH HOH . E 4 HOH A 3 403 86 HOH HOH . E 4 HOH A 4 404 89 HOH HOH . E 4 HOH A 5 405 147 HOH HOH . E 4 HOH A 6 406 148 HOH HOH . E 4 HOH A 7 407 43 HOH HOH . E 4 HOH A 8 408 159 HOH HOH . E 4 HOH A 9 409 68 HOH HOH . E 4 HOH A 10 410 62 HOH HOH . E 4 HOH A 11 411 30 HOH HOH . E 4 HOH A 12 412 98 HOH HOH . E 4 HOH A 13 413 31 HOH HOH . E 4 HOH A 14 414 157 HOH HOH . E 4 HOH A 15 415 33 HOH HOH . E 4 HOH A 16 416 101 HOH HOH . E 4 HOH A 17 417 52 HOH HOH . E 4 HOH A 18 418 99 HOH HOH . E 4 HOH A 19 419 97 HOH HOH . E 4 HOH A 20 420 135 HOH HOH . E 4 HOH A 21 421 162 HOH HOH . E 4 HOH A 22 422 4 HOH HOH . E 4 HOH A 23 423 93 HOH HOH . E 4 HOH A 24 424 8 HOH HOH . E 4 HOH A 25 425 102 HOH HOH . E 4 HOH A 26 426 67 HOH HOH . E 4 HOH A 27 427 92 HOH HOH . E 4 HOH A 28 428 58 HOH HOH . E 4 HOH A 29 429 80 HOH HOH . E 4 HOH A 30 430 110 HOH HOH . E 4 HOH A 31 431 169 HOH HOH . E 4 HOH A 32 432 34 HOH HOH . E 4 HOH A 33 433 14 HOH HOH . E 4 HOH A 34 434 19 HOH HOH . E 4 HOH A 35 435 122 HOH HOH . E 4 HOH A 36 436 95 HOH HOH . E 4 HOH A 37 437 76 HOH HOH . E 4 HOH A 38 438 32 HOH HOH . E 4 HOH A 39 439 18 HOH HOH . E 4 HOH A 40 440 163 HOH HOH . E 4 HOH A 41 441 85 HOH HOH . E 4 HOH A 42 442 17 HOH HOH . E 4 HOH A 43 443 16 HOH HOH . E 4 HOH A 44 444 133 HOH HOH . E 4 HOH A 45 445 151 HOH HOH . E 4 HOH A 46 446 90 HOH HOH . E 4 HOH A 47 447 56 HOH HOH . E 4 HOH A 48 448 27 HOH HOH . E 4 HOH A 49 449 139 HOH HOH . E 4 HOH A 50 450 131 HOH HOH . E 4 HOH A 51 451 136 HOH HOH . E 4 HOH A 52 452 91 HOH HOH . E 4 HOH A 53 453 61 HOH HOH . E 4 HOH A 54 454 82 HOH HOH . E 4 HOH A 55 455 141 HOH HOH . E 4 HOH A 56 456 137 HOH HOH . E 4 HOH A 57 457 146 HOH HOH . E 4 HOH A 58 458 134 HOH HOH . E 4 HOH A 59 459 125 HOH HOH . E 4 HOH A 60 460 6 HOH HOH . E 4 HOH A 61 461 24 HOH HOH . E 4 HOH A 62 462 7 HOH HOH . E 4 HOH A 63 463 38 HOH HOH . E 4 HOH A 64 464 116 HOH HOH . E 4 HOH A 65 465 2 HOH HOH . E 4 HOH A 66 466 10 HOH HOH . E 4 HOH A 67 467 158 HOH HOH . E 4 HOH A 68 468 145 HOH HOH . E 4 HOH A 69 469 118 HOH HOH . E 4 HOH A 70 470 20 HOH HOH . E 4 HOH A 71 471 153 HOH HOH . E 4 HOH A 72 472 87 HOH HOH . E 4 HOH A 73 473 103 HOH HOH . E 4 HOH A 74 474 130 HOH HOH . E 4 HOH A 75 475 96 HOH HOH . E 4 HOH A 76 476 42 HOH HOH . E 4 HOH A 77 477 78 HOH HOH . E 4 HOH A 78 478 166 HOH HOH . E 4 HOH A 79 479 64 HOH HOH . E 4 HOH A 80 480 129 HOH HOH . E 4 HOH A 81 481 165 HOH HOH . E 4 HOH A 82 482 28 HOH HOH . E 4 HOH A 83 483 112 HOH HOH . E 4 HOH A 84 484 66 HOH HOH . E 4 HOH A 85 485 1 HOH HOH . E 4 HOH A 86 486 138 HOH HOH . E 4 HOH A 87 487 12 HOH HOH . E 4 HOH A 88 488 106 HOH HOH . E 4 HOH A 89 489 88 HOH HOH . E 4 HOH A 90 490 22 HOH HOH . E 4 HOH A 91 491 53 HOH HOH . E 4 HOH A 92 492 59 HOH HOH . E 4 HOH A 93 493 25 HOH HOH . E 4 HOH A 94 494 161 HOH HOH . E 4 HOH A 95 495 69 HOH HOH . E 4 HOH A 96 496 3 HOH HOH . E 4 HOH A 97 497 174 HOH HOH . E 4 HOH A 98 498 72 HOH HOH . E 4 HOH A 99 499 51 HOH HOH . E 4 HOH A 100 500 152 HOH HOH . E 4 HOH A 101 501 44 HOH HOH . E 4 HOH A 102 502 63 HOH HOH . E 4 HOH A 103 503 5 HOH HOH . E 4 HOH A 104 504 132 HOH HOH . E 4 HOH A 105 505 11 HOH HOH . E 4 HOH A 106 506 117 HOH HOH . E 4 HOH A 107 507 48 HOH HOH . E 4 HOH A 108 508 21 HOH HOH . E 4 HOH A 109 509 29 HOH HOH . E 4 HOH A 110 510 143 HOH HOH . E 4 HOH A 111 511 23 HOH HOH . E 4 HOH A 112 512 142 HOH HOH . E 4 HOH A 113 513 13 HOH HOH . E 4 HOH A 114 514 140 HOH HOH . E 4 HOH A 115 515 35 HOH HOH . E 4 HOH A 116 516 49 HOH HOH . E 4 HOH A 117 517 100 HOH HOH . E 4 HOH A 118 518 108 HOH HOH . E 4 HOH A 119 519 126 HOH HOH . E 4 HOH A 120 520 144 HOH HOH . E 4 HOH A 121 521 46 HOH HOH . E 4 HOH A 122 522 160 HOH HOH . E 4 HOH A 123 523 15 HOH HOH . E 4 HOH A 124 524 71 HOH HOH . E 4 HOH A 125 525 109 HOH HOH . E 4 HOH A 126 526 54 HOH HOH . E 4 HOH A 127 527 83 HOH HOH . E 4 HOH A 128 528 36 HOH HOH . E 4 HOH A 129 529 40 HOH HOH . E 4 HOH A 130 530 104 HOH HOH . E 4 HOH A 131 531 81 HOH HOH . E 4 HOH A 132 532 37 HOH HOH . E 4 HOH A 133 533 26 HOH HOH . E 4 HOH A 134 534 121 HOH HOH . E 4 HOH A 135 535 50 HOH HOH . E 4 HOH A 136 536 55 HOH HOH . E 4 HOH A 137 537 57 HOH HOH . E 4 HOH A 138 538 94 HOH HOH . E 4 HOH A 139 539 84 HOH HOH . E 4 HOH A 140 540 41 HOH HOH . E 4 HOH A 141 541 60 HOH HOH . E 4 HOH A 142 542 149 HOH HOH . E 4 HOH A 143 543 155 HOH HOH . E 4 HOH A 144 544 119 HOH HOH . E 4 HOH A 145 545 47 HOH HOH . E 4 HOH A 146 546 45 HOH HOH . E 4 HOH A 147 547 176 HOH HOH . E 4 HOH A 148 548 75 HOH HOH . E 4 HOH A 149 549 114 HOH HOH . E 4 HOH A 150 550 74 HOH HOH . E 4 HOH A 151 551 107 HOH HOH . E 4 HOH A 152 552 79 HOH HOH . E 4 HOH A 153 553 70 HOH HOH . E 4 HOH A 154 554 127 HOH HOH . E 4 HOH A 155 555 123 HOH HOH . E 4 HOH A 156 556 128 HOH HOH . E 4 HOH A 157 557 156 HOH HOH . E 4 HOH A 158 558 150 HOH HOH . E 4 HOH A 159 559 170 HOH HOH . E 4 HOH A 160 560 171 HOH HOH . E 4 HOH A 161 561 173 HOH HOH . E 4 HOH A 162 562 9 HOH HOH . E 4 HOH A 163 563 120 HOH HOH . E 4 HOH A 164 564 113 HOH HOH . E 4 HOH A 165 565 77 HOH HOH . E 4 HOH A 166 566 175 HOH HOH . E 4 HOH A 167 567 111 HOH HOH . E 4 HOH A 168 568 164 HOH HOH . E 4 HOH A 169 569 177 HOH HOH . E 4 HOH A 170 570 178 HOH HOH . E 4 HOH A 171 571 65 HOH HOH . E 4 HOH A 172 572 39 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 2.75 _atom_site.Cartn_y 9.515 _atom_site.Cartn_z 16.482 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #