data_8XL8
#
_model_server_result.job_id            0wYwXg9kUJx3vU8K3DV7rA 
_model_server_result.datetime_utc      '2024-11-28 05:38:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xl8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":801}' 
#
_entry.id    8XL8 
#
_exptl.entry_id    8XL8 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              244.311 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BIOTIN 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8XL8 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8XL8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    12-meric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 M N N 
? 3 O N N 
? 3 Q N N 
? 3 S N N 
? 3 U N N 
? 3 W N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 681 A LYS 681 1_555 M C11 BTN . A BTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? 
covale ? covale2 C NZ LYS 681 C LYS 681 1_555 O C11 BTN . C BTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
covale ? covale3 E NZ LYS 681 E LYS 681 1_555 Q C11 BTN . E BTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
covale ? covale4 G NZ LYS 681 G LYS 681 1_555 S C11 BTN . G BTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
covale ? covale5 I NZ LYS 681 I LYS 681 1_555 U C11 BTN . I BTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
covale ? covale6 K NZ LYS 681 K LYS 681 1_555 W C11 BTN . K BTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? 
#
_chem_comp.formula           'C10 H16 N2 O3 S' 
_chem_comp.formula_weight    244.311 
_chem_comp.id                BTN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BIOTIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C11 O11 BTN doub 164 n n 
C11 O12 BTN sing 165 n n 
C11 C10 BTN sing 166 n n 
O12 HO2 BTN sing 167 n n 
C10 C9 BTN sing 168 n n 
C10 H101 BTN sing 169 n n 
C10 H102 BTN sing 170 n n 
C9 C8 BTN sing 171 n n 
C9 H91 BTN sing 172 n n 
C9 H92 BTN sing 173 n n 
C8 C7 BTN sing 174 n n 
C8 H81 BTN sing 175 n n 
C8 H82 BTN sing 176 n n 
C7 C2 BTN sing 177 n n 
C7 H71 BTN sing 178 n n 
C7 H72 BTN sing 179 n n 
C2 S1 BTN sing 180 n n 
C2 C4 BTN sing 181 n n 
C2 H2 BTN sing 182 n n 
S1 C6 BTN sing 183 n n 
C6 C5 BTN sing 184 n n 
C6 H61 BTN sing 185 n n 
C6 H62 BTN sing 186 n n 
C5 N1 BTN sing 187 n n 
C5 C4 BTN sing 188 n n 
C5 H5 BTN sing 189 n n 
N1 C3 BTN sing 190 n n 
N1 HN1 BTN sing 191 n n 
C3 O3 BTN doub 192 n n 
C3 N2 BTN sing 193 n n 
N2 C4 BTN sing 194 n n 
N2 HN2 BTN sing 195 n n 
C4 H4 BTN sing 196 n n 
#
_atom_sites.entry_id                     8XL8 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 3 BTN A 1 801 801 BTN BTN . 
N 4 1VU B 1 601 601 1VU 1VU . 
O 3 BTN C 1 801 801 BTN BTN . 
P 4 1VU D 1 601 601 1VU 1VU . 
Q 3 BTN E 1 801 801 BTN BTN . 
R 4 1VU F 1 601 601 1VU 1VU . 
S 3 BTN G 1 801 801 BTN BTN . 
T 4 1VU H 1 601 601 1VU 1VU . 
U 3 BTN I 1 801 801 BTN BTN . 
V 4 1VU J 1 601 601 1VU 1VU . 
W 3 BTN K 1 801 801 BTN BTN . 
X 4 1VU L 1 601 601 1VU 1VU . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 BTN . . . Q 3 259.612 206.169 253.511 1 90.48 ? C11 BTN 801 E 1 
HETATM 2 O O11 BTN . . . Q 3 258.463 205.734 253.666 1 90.48 ? O11 BTN 801 E 1 
HETATM 3 C C10 BTN . . . Q 3 259.947 207.621 253.729 1 90.48 ? C10 BTN 801 E 1 
HETATM 4 C C9 BTN . . . Q 3 260.714 207.875 255.014 1 90.48 ? C9 BTN 801 E 1 
HETATM 5 C C8 BTN . . . Q 3 261.052 209.352 255.253 1 90.48 ? C8 BTN 801 E 1 
HETATM 6 C C7 BTN . . . Q 3 261.017 210.265 254.03 1 90.48 ? C7 BTN 801 E 1 
HETATM 7 C C2 BTN . . . Q 3 262.356 210.79 253.521 1 90.48 ? C2 BTN 801 E 1 
HETATM 8 S S1 BTN . . . Q 3 263.618 210.561 254.584 1 90.48 ? S1 BTN 801 E 1 
HETATM 9 C C6 BTN . . . Q 3 264.575 211.844 253.738 1 90.48 ? C6 BTN 801 E 1 
HETATM 10 C C5 BTN . . . Q 3 263.648 212.868 253.156 1 90.48 ? C5 BTN 801 E 1 
HETATM 11 N N1 BTN . . . Q 3 263.581 213.943 254.098 1 90.48 ? N1 BTN 801 E 1 
HETATM 12 C C3 BTN . . . Q 3 262.479 213.886 254.816 1 90.48 ? C3 BTN 801 E 1 
HETATM 13 O O3 BTN . . . Q 3 262.216 214.686 255.939 1 90.48 ? O3 BTN 801 E 1 
HETATM 14 N N2 BTN . . . Q 3 261.667 212.961 254.343 1 90.48 ? N2 BTN 801 E 1 
HETATM 15 C C4 BTN . . . Q 3 262.265 212.273 253.231 1 90.48 ? C4 BTN 801 E 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    72 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           15 
#