data_8XOM
#
_model_server_result.job_id            yzShqhBQMXa2GBxXy5NKOQ 
_model_server_result.datetime_utc      '2025-01-03 04:21:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xom 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":1417}' 
#
_entry.id    8XOM 
#
_exptl.entry_id    8XOM 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8XOM 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8XOM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             R 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O2B ANP . A ANP 1401 1_555 S MG MG . A MG 1418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
metalc ? metalc2 B O1A ANP . A ANP 1401 1_555 S MG MG . A MG 1418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc3 B O2A ANP . A ANP 1401 1_555 S MG MG . A MG 1418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc4 B O3A ANP . A ANP 1401 1_555 S MG MG . A MG 1418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 459 n n 
C1 O2 PLM doub 460 n n 
C1 C2 PLM sing 461 n n 
O1 H PLM sing 462 n n 
C2 C3 PLM sing 463 n n 
C2 H21 PLM sing 464 n n 
C2 H22 PLM sing 465 n n 
C3 C4 PLM sing 466 n n 
C3 H31 PLM sing 467 n n 
C3 H32 PLM sing 468 n n 
C4 C5 PLM sing 469 n n 
C4 H41 PLM sing 470 n n 
C4 H42 PLM sing 471 n n 
C5 C6 PLM sing 472 n n 
C5 H51 PLM sing 473 n n 
C5 H52 PLM sing 474 n n 
C6 C7 PLM sing 475 n n 
C6 H61 PLM sing 476 n n 
C6 H62 PLM sing 477 n n 
C7 C8 PLM sing 478 n n 
C7 H71 PLM sing 479 n n 
C7 H72 PLM sing 480 n n 
C8 C9 PLM sing 481 n n 
C8 H81 PLM sing 482 n n 
C8 H82 PLM sing 483 n n 
C9 CA PLM sing 484 n n 
C9 H91 PLM sing 485 n n 
C9 H92 PLM sing 486 n n 
CA CB PLM sing 487 n n 
CA HA1 PLM sing 488 n n 
CA HA2 PLM sing 489 n n 
CB CC PLM sing 490 n n 
CB HB1 PLM sing 491 n n 
CB HB2 PLM sing 492 n n 
CC CD PLM sing 493 n n 
CC HC1 PLM sing 494 n n 
CC HC2 PLM sing 495 n n 
CD CE PLM sing 496 n n 
CD HD1 PLM sing 497 n n 
CD HD2 PLM sing 498 n n 
CE CF PLM sing 499 n n 
CE HE1 PLM sing 500 n n 
CE HE2 PLM sing 501 n n 
CF CG PLM sing 502 n n 
CF HF1 PLM sing 503 n n 
CF HF2 PLM sing 504 n n 
CG HG1 PLM sing 505 n n 
CG HG2 PLM sing 506 n n 
CG HG3 PLM sing 507 n n 
#
_atom_sites.entry_id                     8XOM 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP A 1 1401 1401 ANP ANP . 
C 3 MTX A 1 1402 1501 MTX MTX . 
D 4 DU0 A 1 1403 1 DU0 DU0 . 
E 4 DU0 A 1 1404 2 DU0 DU0 . 
F 4 DU0 A 1 1405 3 DU0 DU0 . 
G 4 DU0 A 1 1406 4 DU0 DU0 . 
H 4 DU0 A 1 1407 5 DU0 DU0 . 
I 4 DU0 A 1 1408 6 DU0 DU0 . 
J 4 DU0 A 1 1409 7 DU0 DU0 . 
K 4 DU0 A 1 1410 8 DU0 DU0 . 
L 4 DU0 A 1 1411 9 DU0 DU0 . 
M 4 DU0 A 1 1412 10 DU0 DU0 . 
N 4 DU0 A 1 1413 11 DU0 DU0 . 
O 4 DU0 A 1 1414 12 DU0 DU0 . 
P 4 DU0 A 1 1415 13 DU0 DU0 . 
Q 4 DU0 A 1 1416 14 DU0 DU0 . 
R 5 PLM A 1 1417 16 PLM PLM . 
S 6 MG A 1 1418 1 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . R 5 128.39 113.692 102.493 1 176.29 ? C1 PLM 1417 A 1 
HETATM 2 O O1 PLM . . . R 5 128.731 114.038 101.343 1 179.81 ? O1 PLM 1417 A 1 
HETATM 3 O O2 PLM . . . R 5 127.28 113.227 102.829 1 165.95 ? O2 PLM 1417 A 1 
HETATM 4 C C2 PLM . . . R 5 129.438 113.851 103.613 1 172.84 ? C2 PLM 1417 A 1 
HETATM 5 C C3 PLM . . . R 5 129.598 115.253 104.184 1 170.14 ? C3 PLM 1417 A 1 
HETATM 6 C C4 PLM . . . R 5 128.876 115.434 105.514 1 154.06 ? C4 PLM 1417 A 1 
HETATM 7 C C5 PLM . . . R 5 127.396 115.066 105.478 1 144.88 ? C5 PLM 1417 A 1 
HETATM 8 C C6 PLM . . . R 5 126.543 115.678 106.585 1 138.82 ? C6 PLM 1417 A 1 
HETATM 9 C C7 PLM . . . R 5 127.051 115.376 107.989 1 138.11 ? C7 PLM 1417 A 1 
HETATM 10 C C8 PLM . . . R 5 125.962 115.492 109.047 1 150.52 ? C8 PLM 1417 A 1 
HETATM 11 C C9 PLM . . . R 5 124.772 114.592 108.739 1 142.65 ? C9 PLM 1417 A 1 
HETATM 12 C CA PLM . . . R 5 123.589 114.718 109.694 1 124.25 ? CA PLM 1417 A 1 
HETATM 13 C CB PLM . . . R 5 122.296 114.136 109.142 1 116.32 ? CB PLM 1417 A 1 
HETATM 14 C CC PLM . . . R 5 121.128 114.217 110.112 1 110.04 ? CC PLM 1417 A 1 
HETATM 15 C CD PLM . . . R 5 120.902 112.937 110.903 1 102.35 ? CD PLM 1417 A 1 
HETATM 16 C CE PLM . . . R 5 120.855 113.168 112.409 1 115.95 ? CE PLM 1417 A 1 
HETATM 17 C CF PLM . . . R 5 120.32 112.001 113.228 1 112.21 ? CF PLM 1417 A 1 
HETATM 18 C CG PLM . . . R 5 120.1 112.372 114.688 1 98.21 ? CG PLM 1417 A 1 
#
_model_server_stats.io_time_ms              306 
_model_server_stats.parse_time_ms           201 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           18 
#