data_8XQP
#
_model_server_result.job_id            Ix5_FQSb1PTmDF558XxqmA 
_model_server_result.datetime_utc      '2025-01-02 18:11:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xqp 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
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_entry.id    8XQP 
#
_exptl.entry_id    8XQP 
_exptl.method      'ELECTRON MICROSCOPY' 
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_entity.details                     ? 
_entity.formula_weight              341.272 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '8-methoxy-6-nitro-naphtho[1,2-e][1,3]benzodioxole-5-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8XQP 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 8XQP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 42 S CYS 22 1_555 E SG CYS 116 S CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 E SG CYS 179 S CYS 147 1_555 E SG CYS 249 S CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C17 H11 N O7' 
_chem_comp.formula_weight    341.272 
_chem_comp.id                GOQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '8-methoxy-6-nitro-naphtho[1,2-e][1,3]benzodioxole-5-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 N GOQ sing 206 n n 
O5 C16 GOQ doub 207 n n 
O6 C16 GOQ sing 208 n n 
N O1 GOQ doub 209 n n 
N C8 GOQ sing 210 n n 
C16 C11 GOQ sing 211 n n 
C8 C9 GOQ doub 212 n y 
C8 C7 GOQ sing 213 n y 
C11 C7 GOQ doub 214 n y 
C11 C12 GOQ sing 215 n y 
C O GOQ sing 216 n n 
C9 C10 GOQ sing 217 n y 
C7 C6 GOQ sing 218 n y 
C12 C13 GOQ doub 219 n y 
O C1 GOQ sing 220 n n 
C10 C1 GOQ doub 221 n y 
C10 C5 GOQ sing 222 n y 
C6 C5 GOQ sing 223 n y 
C6 C14 GOQ doub 224 n y 
C13 C14 GOQ sing 225 n y 
C13 O4 GOQ sing 226 n n 
C1 C2 GOQ sing 227 n y 
C5 C4 GOQ doub 228 n y 
C14 O3 GOQ sing 229 n n 
O4 C15 GOQ sing 230 n n 
C2 C3 GOQ doub 231 n y 
C4 C3 GOQ sing 232 n y 
O3 C15 GOQ sing 233 n n 
C H1 GOQ sing 234 n n 
C H2 GOQ sing 235 n n 
C H3 GOQ sing 236 n n 
C12 H4 GOQ sing 237 n n 
C15 H5 GOQ sing 238 n n 
C15 H6 GOQ sing 239 n n 
C2 H7 GOQ sing 240 n n 
C3 H8 GOQ sing 241 n n 
C4 H9 GOQ sing 242 n n 
C9 H10 GOQ sing 243 n n 
O6 H11 GOQ sing 244 n n 
#
_atom_sites.entry_id                     8XQP 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 GOQ R 1 501 402 GOQ GOQ . 
G 7 CLR R 1 502 403 CLR CLR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GOQ . . . F 6 127.676 127.414 148.596 1 114.35 ? N GOQ 501 R 1 
HETATM 2 C C GOQ . . . F 6 129.598 122.711 145.052 1 106.77 ? C GOQ 501 R 1 
HETATM 3 O O GOQ . . . F 6 128.794 123.611 145.817 1 107.46 ? O GOQ 501 R 1 
HETATM 4 C C1 GOQ . . . F 6 127.68 123.099 146.424 1 109.13 ? C1 GOQ 501 R 1 
HETATM 5 C C10 GOQ . . . F 6 127.069 123.964 147.342 1 108.06 ? C10 GOQ 501 R 1 
HETATM 6 C C11 GOQ . . . F 6 125.216 126.63 150.14 1 107.07 ? C11 GOQ 501 R 1 
HETATM 7 C C12 GOQ . . . F 6 124.066 126.216 150.819 1 105.45 ? C12 GOQ 501 R 1 
HETATM 8 C C13 GOQ . . . F 6 123.561 124.934 150.597 1 108.86 ? C13 GOQ 501 R 1 
HETATM 9 C C14 GOQ . . . F 6 124.155 124.073 149.683 1 111.38 ? C14 GOQ 501 R 1 
HETATM 10 C C15 GOQ . . . F 6 122.618 122.949 150.802 1 109.25 ? C15 GOQ 501 R 1 
HETATM 11 C C16 GOQ . . . F 6 125.693 128.04 150.449 1 112.03 ? C16 GOQ 501 R 1 
HETATM 12 C C2 GOQ . . . F 6 127.177 121.825 146.194 1 109.73 ? C2 GOQ 501 R 1 
HETATM 13 C C3 GOQ . . . F 6 126.035 121.419 146.886 1 110.16 ? C3 GOQ 501 R 1 
HETATM 14 C C4 GOQ . . . F 6 125.419 122.28 147.799 1 109.64 ? C4 GOQ 501 R 1 
HETATM 15 C C5 GOQ . . . F 6 125.922 123.565 148.044 1 109.2 ? C5 GOQ 501 R 1 
HETATM 16 C C6 GOQ . . . F 6 125.308 124.453 148.971 1 107.93 ? C6 GOQ 501 R 1 
HETATM 17 C C7 GOQ . . . F 6 125.853 125.755 149.188 1 105.1 ? C7 GOQ 501 R 1 
HETATM 18 C C8 GOQ . . . F 6 127.019 126.121 148.451 1 108.81 ? C8 GOQ 501 R 1 
HETATM 19 C C9 GOQ . . . F 6 127.602 125.234 147.557 1 107.35 ? C9 GOQ 501 R 1 
HETATM 20 O O1 GOQ . . . F 6 127.541 128.229 147.696 1 114.75 ? O1 GOQ 501 R 1 
HETATM 21 O O2 GOQ . . . F 6 128.348 127.61 149.598 1 109.62 ? O2 GOQ 501 R 1 
HETATM 22 O O3 GOQ . . . F 6 123.459 122.892 149.647 1 110.88 ? O3 GOQ 501 R 1 
HETATM 23 O O4 GOQ . . . F 6 122.456 124.327 151.145 1 109.57 ? O4 GOQ 501 R 1 
HETATM 24 O O5 GOQ . . . F 6 125.649 128.88 149.534 1 110.05 ? O5 GOQ 501 R 1 
HETATM 25 O O6 GOQ . . . F 6 126.026 128.286 151.622 1 110.75 ? O6 GOQ 501 R 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           25 
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