data_8XSU
#
_model_server_result.job_id            aFC95DOx1MDhSZAwTnzzDQ 
_model_server_result.datetime_utc      '2025-01-09 04:50:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8xsu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    8XSU 
#
_exptl.entry_id    8XSU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              202.211 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-methyl-1-nitro-3-[(tetrahydro-3-furanyl) methyl] guanidine' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8XSU 
_cell.length_a            74.149 
_cell.length_b            74.149 
_cell.length_c            350.306 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8XSU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
? 3 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 124 A CYS 123 1_555 A SG CYS 137 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 188 A CYS 187 1_555 A SG CYS 189 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 B SG CYS 124 B CYS 123 1_555 B SG CYS 137 B CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
disulf ? disulf4 B SG CYS 188 B CYS 187 1_555 B SG CYS 189 B CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf5 C SG CYS 124 C CYS 123 1_555 C SG CYS 137 C CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf6 C SG CYS 188 C CYS 187 1_555 C SG CYS 189 C CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf7 D SG CYS 123 D CYS 123 1_555 D SG CYS 136 D CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf8 D SG CYS 187 D CYS 187 1_555 D SG CYS 188 D CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf9 E SG CYS 124 E CYS 123 1_555 E SG CYS 137 E CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf10 E SG CYS 188 E CYS 187 1_555 E SG CYS 189 E CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
covale ? covale1 B ND2 ASN 67 B ASN 66 1_555 I C1 NAG . B NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? 
covale ? covale2 C ND2 ASN 67 C ASN 66 1_555 K C1 NAG . C NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.47 ? 
covale ? covale3 D ND2 ASN 66 D ASN 66 1_555 M C1 NAG . D NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.475 ? 
#
_chem_comp.formula           'C7 H14 N4 O3' 
_chem_comp.formula_weight    202.211 
_chem_comp.id                A1LW0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-methyl-1-nitro-3-[(tetrahydro-3-furanyl) methyl] guanidine' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     dinotefuran 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 N1 A1LW0 sing 1 n n 
N1 C2 A1LW0 sing 2 n n 
C2 N2 A1LW0 doub 3 e n 
N2 N3 A1LW0 sing 4 n n 
N3 O1 A1LW0 doub 5 n n 
N3 O2 A1LW0 sing 6 n n 
C2 N4 A1LW0 sing 7 n n 
N4 C3 A1LW0 sing 8 n n 
C3 C4 A1LW0 sing 9 n n 
C4 C5 A1LW0 sing 10 n n 
C5 C6 A1LW0 sing 11 n n 
C6 O3 A1LW0 sing 12 n n 
O3 C7 A1LW0 sing 13 n n 
C4 C7 A1LW0 sing 14 n n 
C4 H8 A1LW0 sing 15 n n 
C5 H10 A1LW0 sing 16 n n 
C5 H9 A1LW0 sing 17 n n 
C6 H12 A1LW0 sing 18 n n 
C6 H11 A1LW0 sing 19 n n 
C7 H14 A1LW0 sing 20 n n 
C7 H13 A1LW0 sing 21 n n 
N1 H4 A1LW0 sing 22 n n 
C3 H7 A1LW0 sing 23 n n 
C3 H6 A1LW0 sing 24 n n 
C1 H1 A1LW0 sing 25 n n 
C1 H3 A1LW0 sing 26 n n 
C1 H2 A1LW0 sing 27 n n 
N4 H5 A1LW0 sing 28 n n 
#
_atom_sites.entry_id                     8XSU 
_atom_sites.fract_transf_matrix[1][1]    0.013486 
_atom_sites.fract_transf_matrix[1][2]    0.007786 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015573 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002855 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 A1LW0 A 1 301 301 A1LW0 DRG . 
G 4 NAG A 1 302 302 NAG NAG . 
H 3 A1LW0 B 1 301 301 A1LW0 DRG . 
I 4 NAG B 1 302 302 NAG NAG . 
J 3 A1LW0 C 1 301 301 A1LW0 DRG . 
K 4 NAG C 1 302 302 NAG NAG . 
L 3 A1LW0 D 1 301 301 A1LW0 DRG . 
M 4 NAG D 1 302 302 NAG NAG . 
N 3 A1LW0 E 1 301 301 A1LW0 DRG . 
O 4 NAG E 1 302 302 NAG NAG . 
P 5 HOH A 1 401 2 HOH HOH . 
P 5 HOH A 2 402 53 HOH HOH . 
P 5 HOH A 3 403 24 HOH HOH . 
P 5 HOH A 4 404 43 HOH HOH . 
P 5 HOH A 5 405 52 HOH HOH . 
P 5 HOH A 6 406 46 HOH HOH . 
P 5 HOH A 7 407 28 HOH HOH . 
P 5 HOH A 8 408 33 HOH HOH . 
P 5 HOH A 9 409 1 HOH HOH . 
P 5 HOH A 10 410 3 HOH HOH . 
P 5 HOH A 11 411 32 HOH HOH . 
P 5 HOH A 12 412 21 HOH HOH . 
P 5 HOH A 13 413 14 HOH HOH . 
Q 5 HOH B 1 401 59 HOH HOH . 
Q 5 HOH B 2 402 5 HOH HOH . 
Q 5 HOH B 3 403 4 HOH HOH . 
Q 5 HOH B 4 404 29 HOH HOH . 
Q 5 HOH B 5 405 38 HOH HOH . 
Q 5 HOH B 6 406 13 HOH HOH . 
Q 5 HOH B 7 407 49 HOH HOH . 
Q 5 HOH B 8 408 56 HOH HOH . 
R 5 HOH C 1 401 9 HOH HOH . 
R 5 HOH C 2 402 58 HOH HOH . 
R 5 HOH C 3 403 23 HOH HOH . 
R 5 HOH C 4 404 22 HOH HOH . 
R 5 HOH C 5 405 8 HOH HOH . 
R 5 HOH C 6 406 25 HOH HOH . 
R 5 HOH C 7 407 40 HOH HOH . 
S 5 HOH D 1 401 10 HOH HOH . 
S 5 HOH D 2 402 39 HOH HOH . 
S 5 HOH D 3 403 35 HOH HOH . 
S 5 HOH D 4 404 31 HOH HOH . 
S 5 HOH D 5 405 15 HOH HOH . 
S 5 HOH D 6 406 16 HOH HOH . 
S 5 HOH D 7 407 6 HOH HOH . 
S 5 HOH D 8 408 54 HOH HOH . 
T 5 HOH E 1 401 18 HOH HOH . 
T 5 HOH E 2 402 17 HOH HOH . 
T 5 HOH E 3 403 20 HOH HOH . 
T 5 HOH E 4 404 36 HOH HOH . 
T 5 HOH E 5 405 41 HOH HOH . 
T 5 HOH E 6 406 37 HOH HOH . 
T 5 HOH E 7 407 30 HOH HOH . 
T 5 HOH E 8 408 19 HOH HOH . 
T 5 HOH E 9 409 57 HOH HOH . 
T 5 HOH E 10 410 60 HOH HOH . 
T 5 HOH E 11 411 47 HOH HOH . 
T 5 HOH E 12 412 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 A1LW0 . . . F 3 -20.841 -8.22 2.54 1 62.13 0 C4 A1LW0 301 A 1 
HETATM 2 C C5 A1LW0 . . . F 3 -20.624 -7.595 3.911 1 62.93 0 C5 A1LW0 301 A 1 
HETATM 3 C C6 A1LW0 . . . F 3 -21.611 -8.33 4.745 1 64 0 C6 A1LW0 301 A 1 
HETATM 4 C C7 A1LW0 . . . F 3 -20.989 -9.676 2.96 1 59.12 0 C7 A1LW0 301 A 1 
HETATM 5 N N1 A1LW0 . . . F 3 -21.026 -7.033 -1.18 1 83.5 0 N1 A1LW0 301 A 1 
HETATM 6 N N2 A1LW0 . . . F 3 -21.39 -5.035 0.004 1 89.02 0 N2 A1LW0 301 A 1 
HETATM 7 C C3 A1LW0 . . . F 3 -19.765 -7.895 1.527 1 62.47 0 C3 A1LW0 301 A 1 
HETATM 8 N N3 A1LW0 . . . F 3 -22.34 -4.629 -0.861 1 100.07 0 N3 A1LW0 301 A 1 
HETATM 9 C C1 A1LW0 . . . F 3 -20.308 -8.236 -1.541 1 80.33 0 C1 A1LW0 301 A 1 
HETATM 10 C C2 A1LW0 . . . F 3 -20.778 -6.256 -0.104 1 81.86 0 C2 A1LW0 301 A 1 
HETATM 11 O O1 A1LW0 . . . F 3 -22.683 -5.383 -1.798 1 93.85 0 O1 A1LW0 301 A 1 
HETATM 12 O O2 A1LW0 . . . F 3 -22.884 -3.504 -0.704 1 110.15 0 O2 A1LW0 301 A 1 
HETATM 13 N N4 A1LW0 . . . F 3 -20.164 -6.598 1.042 1 69.6 0 N4 A1LW0 301 A 1 
HETATM 14 O O3 A1LW0 . . . F 3 -21.741 -9.64 4.172 1 61.89 0 O3 A1LW0 301 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           148 
_model_server_stats.create_model_time_ms    103 
_model_server_stats.query_time_ms           440 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           14 
#