data_8XT8 # _model_server_result.job_id jVC6LmQosuPl4obXJWEDRw _model_server_result.datetime_utc '2024-11-21 09:03:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8xt8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 8XT8 # _exptl.entry_id 8XT8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.41 _cell.angle_gamma 90 _cell.entry_id 8XT8 _cell.length_a 97.602 _cell.length_b 69.807 _cell.length_c 94.659 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8XT8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 62 A CYS 59 1_555 E HG HG . A HG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc2 B SG CYS 79 B CYS 59 1_555 G HG HG . B HG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc3 B OG1 THR 90 B THR 70 1_555 G HG HG . B HG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.094 ? metalc ? metalc4 C SG CYS 62 C CYS 59 1_555 I HG HG . C HG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc5 C OE1 GLU 63 C GLU 60 1_555 I HG HG . C HG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc6 D SG CYS 66 D CYS 63 1_555 K HG HG . D HG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8XT8 _atom_sites.fract_transf_matrix[1][1] 0.010246 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005088 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014325 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HG A 1 500 500 HG HG . F 3 HG A 1 501 501 HG HG . G 3 HG B 1 500 500 HG HG . H 3 HG B 1 501 501 HG HG . I 3 HG C 1 500 500 HG HG . J 3 HG C 1 501 501 HG HG . K 3 HG D 1 500 500 HG HG . L 3 HG D 1 501 501 HG HG . M 4 HOH A 1 601 27 HOH HOH . M 4 HOH A 2 602 76 HOH HOH . M 4 HOH A 3 603 38 HOH HOH . M 4 HOH A 4 604 56 HOH HOH . M 4 HOH A 5 605 66 HOH HOH . M 4 HOH A 6 606 86 HOH HOH . M 4 HOH A 7 607 33 HOH HOH . M 4 HOH A 8 608 16 HOH HOH . M 4 HOH A 9 609 75 HOH HOH . M 4 HOH A 10 610 23 HOH HOH . M 4 HOH A 11 611 28 HOH HOH . M 4 HOH A 12 612 97 HOH HOH . M 4 HOH A 13 613 37 HOH HOH . M 4 HOH A 14 614 42 HOH HOH . M 4 HOH A 15 615 11 HOH HOH . M 4 HOH A 16 616 85 HOH HOH . M 4 HOH A 17 617 14 HOH HOH . M 4 HOH A 18 618 40 HOH HOH . M 4 HOH A 19 619 55 HOH HOH . M 4 HOH A 20 620 5 HOH HOH . M 4 HOH A 21 621 31 HOH HOH . N 4 HOH B 1 601 101 HOH HOH . N 4 HOH B 2 602 77 HOH HOH . N 4 HOH B 3 603 65 HOH HOH . N 4 HOH B 4 604 18 HOH HOH . N 4 HOH B 5 605 45 HOH HOH . N 4 HOH B 6 606 34 HOH HOH . N 4 HOH B 7 607 84 HOH HOH . N 4 HOH B 8 608 17 HOH HOH . N 4 HOH B 9 609 51 HOH HOH . N 4 HOH B 10 610 61 HOH HOH . N 4 HOH B 11 611 24 HOH HOH . N 4 HOH B 12 612 57 HOH HOH . N 4 HOH B 13 613 26 HOH HOH . N 4 HOH B 14 614 48 HOH HOH . N 4 HOH B 15 615 54 HOH HOH . N 4 HOH B 16 616 35 HOH HOH . N 4 HOH B 17 617 47 HOH HOH . N 4 HOH B 18 618 1 HOH HOH . N 4 HOH B 19 619 3 HOH HOH . N 4 HOH B 20 620 73 HOH HOH . N 4 HOH B 21 621 46 HOH HOH . N 4 HOH B 22 622 2 HOH HOH . N 4 HOH B 23 623 69 HOH HOH . N 4 HOH B 24 624 68 HOH HOH . N 4 HOH B 25 625 78 HOH HOH . N 4 HOH B 26 626 36 HOH HOH . N 4 HOH B 27 627 50 HOH HOH . N 4 HOH B 28 628 67 HOH HOH . O 4 HOH C 1 601 80 HOH HOH . O 4 HOH C 2 602 103 HOH HOH . O 4 HOH C 3 603 60 HOH HOH . O 4 HOH C 4 604 30 HOH HOH . O 4 HOH C 5 605 32 HOH HOH . O 4 HOH C 6 606 98 HOH HOH . O 4 HOH C 7 607 25 HOH HOH . O 4 HOH C 8 608 74 HOH HOH . O 4 HOH C 9 609 59 HOH HOH . O 4 HOH C 10 610 92 HOH HOH . O 4 HOH C 11 611 41 HOH HOH . O 4 HOH C 12 612 72 HOH HOH . O 4 HOH C 13 613 53 HOH HOH . O 4 HOH C 14 614 13 HOH HOH . O 4 HOH C 15 615 94 HOH HOH . O 4 HOH C 16 616 4 HOH HOH . O 4 HOH C 17 617 64 HOH HOH . O 4 HOH C 18 618 44 HOH HOH . O 4 HOH C 19 619 6 HOH HOH . O 4 HOH C 20 620 12 HOH HOH . O 4 HOH C 21 621 29 HOH HOH . O 4 HOH C 22 622 90 HOH HOH . O 4 HOH C 23 623 8 HOH HOH . O 4 HOH C 24 624 81 HOH HOH . O 4 HOH C 25 625 93 HOH HOH . O 4 HOH C 26 626 39 HOH HOH . O 4 HOH C 27 627 95 HOH HOH . O 4 HOH C 28 628 70 HOH HOH . O 4 HOH C 29 629 83 HOH HOH . O 4 HOH C 30 630 91 HOH HOH . P 4 HOH D 1 601 63 HOH HOH . P 4 HOH D 2 602 22 HOH HOH . P 4 HOH D 3 603 20 HOH HOH . P 4 HOH D 4 604 100 HOH HOH . P 4 HOH D 5 605 102 HOH HOH . P 4 HOH D 6 606 10 HOH HOH . P 4 HOH D 7 607 21 HOH HOH . P 4 HOH D 8 608 19 HOH HOH . P 4 HOH D 9 609 82 HOH HOH . P 4 HOH D 10 610 49 HOH HOH . P 4 HOH D 11 611 96 HOH HOH . P 4 HOH D 12 612 7 HOH HOH . P 4 HOH D 13 613 9 HOH HOH . P 4 HOH D 14 614 58 HOH HOH . P 4 HOH D 15 615 52 HOH HOH . P 4 HOH D 16 616 43 HOH HOH . P 4 HOH D 17 617 87 HOH HOH . P 4 HOH D 18 618 62 HOH HOH . P 4 HOH D 19 619 89 HOH HOH . P 4 HOH D 20 620 88 HOH HOH . P 4 HOH D 21 621 79 HOH HOH . P 4 HOH D 22 622 71 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 29.419 _atom_site.Cartn_y 68.839 _atom_site.Cartn_z 29.413 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 210.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #