data_8XU1 # _model_server_result.job_id WO-SElwcqW3sBciEavFJ2g _model_server_result.datetime_utc '2025-02-24 10:53:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8xu1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 8XU1 # _exptl.entry_id 8XU1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.064 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXALOACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.07 _cell.angle_gamma 90 _cell.entry_id 8XU1 _cell.length_a 155.1 _cell.length_b 111.28 _cell.length_c 99.56 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8XU1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,G,H 1 1 C,F,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -43.753524 0 89.430547 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C4 H3 O5 -1' _chem_comp.formula_weight 131.064 _chem_comp.id OAA _chem_comp.mon_nstd_flag . _chem_comp.name 'OXALOACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 OAA doub 237 n n O2 C1 OAA sing 238 n n O4 C4 OAA doub 239 n n O5 C4 OAA sing 240 n n O5 HO5 OAA sing 241 n n O3 C3 OAA doub 242 n n C1 C2 OAA sing 243 n n C2 C3 OAA sing 244 n n C2 H21 OAA sing 245 n n C2 H22 OAA sing 246 n n C3 C4 OAA sing 247 n n # _atom_sites.entry_id 8XU1 _atom_sites.fract_transf_matrix[1][1] 0.006447 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003154 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008986 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011182 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 OAA A 1 501 501 OAA OAA . E 2 OAA B 1 501 501 OAA OAA . F 2 OAA C 1 501 501 OAA OAA . G 3 HOH A 1 601 29 HOH HOH . G 3 HOH A 2 602 65 HOH HOH . G 3 HOH A 3 603 80 HOH HOH . G 3 HOH A 4 604 122 HOH HOH . G 3 HOH A 5 605 39 HOH HOH . G 3 HOH A 6 606 26 HOH HOH . G 3 HOH A 7 607 98 HOH HOH . G 3 HOH A 8 608 107 HOH HOH . G 3 HOH A 9 609 120 HOH HOH . G 3 HOH A 10 610 11 HOH HOH . G 3 HOH A 11 611 58 HOH HOH . G 3 HOH A 12 612 32 HOH HOH . G 3 HOH A 13 613 93 HOH HOH . G 3 HOH A 14 614 96 HOH HOH . G 3 HOH A 15 615 105 HOH HOH . G 3 HOH A 16 616 94 HOH HOH . G 3 HOH A 17 617 115 HOH HOH . G 3 HOH A 18 618 46 HOH HOH . G 3 HOH A 19 619 114 HOH HOH . G 3 HOH A 20 620 16 HOH HOH . G 3 HOH A 21 621 17 HOH HOH . G 3 HOH A 22 622 87 HOH HOH . G 3 HOH A 23 623 85 HOH HOH . G 3 HOH A 24 624 69 HOH HOH . G 3 HOH A 25 625 108 HOH HOH . G 3 HOH A 26 626 21 HOH HOH . G 3 HOH A 27 627 56 HOH HOH . G 3 HOH A 28 628 74 HOH HOH . G 3 HOH A 29 629 53 HOH HOH . G 3 HOH A 30 630 8 HOH HOH . G 3 HOH A 31 631 15 HOH HOH . G 3 HOH A 32 632 41 HOH HOH . G 3 HOH A 33 633 7 HOH HOH . G 3 HOH A 34 634 81 HOH HOH . G 3 HOH A 35 635 12 HOH HOH . G 3 HOH A 36 636 9 HOH HOH . G 3 HOH A 37 637 86 HOH HOH . G 3 HOH A 38 638 119 HOH HOH . G 3 HOH A 39 639 54 HOH HOH . G 3 HOH A 40 640 4 HOH HOH . G 3 HOH A 41 641 118 HOH HOH . G 3 HOH A 42 642 77 HOH HOH . G 3 HOH A 43 643 117 HOH HOH . G 3 HOH A 44 644 101 HOH HOH . G 3 HOH A 45 645 48 HOH HOH . G 3 HOH A 46 646 71 HOH HOH . H 3 HOH B 1 601 27 HOH HOH . H 3 HOH B 2 602 109 HOH HOH . H 3 HOH B 3 603 100 HOH HOH . H 3 HOH B 4 604 76 HOH HOH . H 3 HOH B 5 605 116 HOH HOH . H 3 HOH B 6 606 45 HOH HOH . H 3 HOH B 7 607 42 HOH HOH . H 3 HOH B 8 608 30 HOH HOH . H 3 HOH B 9 609 2 HOH HOH . H 3 HOH B 10 610 50 HOH HOH . H 3 HOH B 11 611 35 HOH HOH . H 3 HOH B 12 612 40 HOH HOH . H 3 HOH B 13 613 97 HOH HOH . H 3 HOH B 14 614 43 HOH HOH . H 3 HOH B 15 615 95 HOH HOH . H 3 HOH B 16 616 19 HOH HOH . H 3 HOH B 17 617 14 HOH HOH . H 3 HOH B 18 618 49 HOH HOH . H 3 HOH B 19 619 121 HOH HOH . H 3 HOH B 20 620 3 HOH HOH . H 3 HOH B 21 621 79 HOH HOH . H 3 HOH B 22 622 1 HOH HOH . H 3 HOH B 23 623 92 HOH HOH . H 3 HOH B 24 625 37 HOH HOH . H 3 HOH B 25 626 75 HOH HOH . H 3 HOH B 26 627 20 HOH HOH . H 3 HOH B 27 628 89 HOH HOH . H 3 HOH B 28 630 59 HOH HOH . H 3 HOH B 29 631 113 HOH HOH . H 3 HOH B 30 632 28 HOH HOH . I 3 HOH C 1 601 106 HOH HOH . I 3 HOH C 2 602 88 HOH HOH . I 3 HOH C 3 603 63 HOH HOH . I 3 HOH C 4 604 82 HOH HOH . I 3 HOH C 5 605 10 HOH HOH . I 3 HOH C 6 606 111 HOH HOH . I 3 HOH C 7 607 25 HOH HOH . I 3 HOH C 8 608 22 HOH HOH . I 3 HOH C 9 609 72 HOH HOH . I 3 HOH C 10 610 99 HOH HOH . I 3 HOH C 11 611 33 HOH HOH . I 3 HOH C 12 612 112 HOH HOH . I 3 HOH C 13 613 84 HOH HOH . I 3 HOH C 14 614 66 HOH HOH . I 3 HOH C 15 615 55 HOH HOH . I 3 HOH C 16 616 31 HOH HOH . I 3 HOH C 17 617 5 HOH HOH . I 3 HOH C 18 618 51 HOH HOH . I 3 HOH C 19 619 90 HOH HOH . I 3 HOH C 20 620 57 HOH HOH . I 3 HOH C 21 621 44 HOH HOH . I 3 HOH C 22 622 13 HOH HOH . I 3 HOH C 23 623 70 HOH HOH . I 3 HOH C 24 624 62 HOH HOH . I 3 HOH C 25 625 83 HOH HOH . I 3 HOH C 26 626 91 HOH HOH . I 3 HOH C 27 627 61 HOH HOH . I 3 HOH C 28 628 38 HOH HOH . I 3 HOH C 29 629 18 HOH HOH . I 3 HOH C 30 630 103 HOH HOH . I 3 HOH C 31 631 78 HOH HOH . I 3 HOH C 32 632 36 HOH HOH . I 3 HOH C 33 633 24 HOH HOH . I 3 HOH C 34 634 67 HOH HOH . I 3 HOH C 35 635 52 HOH HOH . I 3 HOH C 36 636 47 HOH HOH . I 3 HOH C 37 637 64 HOH HOH . I 3 HOH C 38 638 104 HOH HOH . I 3 HOH C 39 639 73 HOH HOH . I 3 HOH C 40 640 110 HOH HOH . I 3 HOH C 41 641 23 HOH HOH . I 3 HOH C 42 642 6 HOH HOH . I 3 HOH C 43 643 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OAA . . . D 2 -42.884 -28.352 11.812 1 48.93 ? O1 OAA 501 A 1 HETATM 2 O O2 OAA . . . D 2 -44.888 -28.995 12.608 1 57.22 ? O2 OAA 501 A 1 HETATM 3 O O4 OAA . . . D 2 -45.867 -25.894 15.092 1 76.67 ? O4 OAA 501 A 1 HETATM 4 O O5 OAA . . . D 2 -45.214 -27.22 16.694 1 65.66 ? O5 OAA 501 A 1 HETATM 5 O O3 OAA . . . D 2 -43.645 -28.183 15.289 1 65.94 ? O3 OAA 501 A 1 HETATM 6 C C1 OAA . . . D 2 -43.936 -28.165 12.509 1 63.33 ? C1 OAA 501 A 1 HETATM 7 C C2 OAA . . . D 2 -44.037 -26.886 13.342 1 62.46 ? C2 OAA 501 A 1 HETATM 8 C C3 OAA . . . D 2 -44.274 -27.267 14.781 1 66.16 ? C3 OAA 501 A 1 HETATM 9 C C4 OAA . . . D 2 -45.143 -26.768 15.543 1 70.07 ? C4 OAA 501 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 389 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #