data_8XX8 # _model_server_result.job_id 2G90wbfaDvuCw3GaIVMl3A _model_server_result.datetime_utc '2024-11-26 20:42:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8xx8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"KA","auth_seq_id":303}' # _entry.id 8XX8 # _exptl.entry_id 8XX8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 34 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.77 _cell.angle_gamma 90 _cell.entry_id 8XX8 _cell.length_a 90.22 _cell.length_b 126.18 _cell.length_c 97.61 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8XX8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,QB 1 1 C,D,E,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,NB,OB,PB 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 EA N N ? 4 FA N N ? 4 GA N N ? 4 KA N N ? 4 LA N N ? 4 MA N N ? 4 NA N N ? 4 OA N N ? 4 PA N N ? 4 QA N N ? 4 XA N N ? 4 YA N N ? 4 ZA N N ? 4 AB N N ? 4 DB N N ? 4 EB N N ? 4 FB N N ? 4 GB N N ? 4 HB N N ? 4 IB N N ? 4 JB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 220 A LYS 221 1_555 R C15 RET . A RET 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale2 B NZ LYS 220 B LYS 221 1_555 Y C15 RET . B RET 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale3 C NZ LYS 220 D LYS 221 1_555 HA C15 RET . D RET 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale4 D NZ LYS 220 E LYS 221 1_555 RA C15 RET . E RET 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale5 E NZ LYS 220 F LYS 221 1_555 BB C15 RET . F RET 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale6 F NZ LYS 220 C LYS 221 1_555 KB C15 RET . C RET 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 298 n n C1 O2 OLA sing 299 n n C1 C2 OLA sing 300 n n O2 HO2 OLA sing 301 n n C2 C3 OLA sing 302 n n C2 H21 OLA sing 303 n n C2 H22 OLA sing 304 n n C3 C4 OLA sing 305 n n C3 H31 OLA sing 306 n n C3 H32 OLA sing 307 n n C4 C5 OLA sing 308 n n C4 H41 OLA sing 309 n n C4 H42 OLA sing 310 n n C5 C6 OLA sing 311 n n C5 H51 OLA sing 312 n n C5 H52 OLA sing 313 n n C6 C7 OLA sing 314 n n C6 H61 OLA sing 315 n n C6 H62 OLA sing 316 n n C7 C8 OLA sing 317 n n C7 H71 OLA sing 318 n n C7 H72 OLA sing 319 n n C8 C9 OLA sing 320 n n C8 H81 OLA sing 321 n n C8 H82 OLA sing 322 n n C9 C10 OLA doub 323 z n C9 H9 OLA sing 324 n n C10 C11 OLA sing 325 n n C10 H10 OLA sing 326 n n C11 C12 OLA sing 327 n n C11 H111 OLA sing 328 n n C11 H112 OLA sing 329 n n C12 C13 OLA sing 330 n n C12 H121 OLA sing 331 n n C12 H122 OLA sing 332 n n C13 C14 OLA sing 333 n n C13 H131 OLA sing 334 n n C13 H132 OLA sing 335 n n C14 C15 OLA sing 336 n n C14 H141 OLA sing 337 n n C14 H142 OLA sing 338 n n C15 C16 OLA sing 339 n n C15 H151 OLA sing 340 n n C15 H152 OLA sing 341 n n C16 C17 OLA sing 342 n n C16 H161 OLA sing 343 n n C16 H162 OLA sing 344 n n C17 C18 OLA sing 345 n n C17 H171 OLA sing 346 n n C17 H172 OLA sing 347 n n C18 H181 OLA sing 348 n n C18 H182 OLA sing 349 n n C18 H183 OLA sing 350 n n # _atom_sites.entry_id 8XX8 _atom_sites.fract_transf_matrix[1][1] 0.011084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002922 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007925 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010595 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 LFA A 1 301 313 LFA LFA . H 3 CL A 1 302 1 CL CL . I 4 OLA A 1 303 4 OLA OLA . J 4 OLA A 1 304 9 OLA OLA . K 4 OLA A 1 305 18 OLA OLA . L 4 OLA A 1 306 20 OLA OLA . M 4 OLA A 1 307 22 OLA OLA . N 4 OLA A 1 308 24 OLA OLA . O 4 OLA A 1 309 29 OLA OLA . P 4 OLA A 1 310 31 OLA OLA . Q 4 OLA A 1 311 34 OLA OLA . R 5 RET A 1 312 311 RET RET . S 2 LFA B 1 301 313 LFA LFA . T 3 CL B 1 302 2 CL CL . U 4 OLA B 1 303 5 OLA OLA . V 4 OLA B 1 304 6 OLA OLA . W 4 OLA B 1 305 7 OLA OLA . X 4 OLA B 1 306 27 OLA OLA . Y 5 RET B 1 307 311 RET RET . Z 2 LFA D 1 301 313 LFA LFA . AA 2 LFA D 1 302 314 LFA LFA . BA 2 LFA D 1 303 315 LFA LFA . CA 2 LFA D 1 304 316 LFA LFA . DA 3 CL D 1 305 4 CL CL . EA 4 OLA D 1 306 11 OLA OLA . FA 4 OLA D 1 307 15 OLA OLA . GA 4 OLA D 1 308 23 OLA OLA . HA 5 RET D 1 309 311 RET RET . IA 2 LFA E 1 301 315 LFA LFA . JA 3 CL E 1 302 5 CL CL . KA 4 OLA E 1 303 2 OLA OLA . LA 4 OLA E 1 304 3 OLA OLA . MA 4 OLA E 1 305 16 OLA OLA . NA 4 OLA E 1 306 17 OLA OLA . OA 4 OLA E 1 307 26 OLA OLA . PA 4 OLA E 1 308 28 OLA OLA . QA 4 OLA E 1 309 30 OLA OLA . RA 5 RET E 1 310 311 RET RET . SA 2 LFA F 1 301 314 LFA LFA . TA 2 LFA F 1 302 316 LFA LFA . UA 2 LFA F 1 303 313 LFA LFA . VA 2 LFA F 1 304 314 LFA LFA . WA 3 CL F 1 305 6 CL CL . XA 4 OLA F 1 306 1 OLA OLA . YA 4 OLA F 1 307 8 OLA OLA . ZA 4 OLA F 1 308 32 OLA OLA . AB 4 OLA F 1 309 40 OLA OLA . BB 5 RET F 1 310 311 RET RET . CB 3 CL C 1 301 3 CL CL . DB 4 OLA C 1 302 10 OLA OLA . EB 4 OLA C 1 303 12 OLA OLA . FB 4 OLA C 1 304 13 OLA OLA . GB 4 OLA C 1 305 14 OLA OLA . HB 4 OLA C 1 306 19 OLA OLA . IB 4 OLA C 1 307 21 OLA OLA . JB 4 OLA C 1 308 25 OLA OLA . KB 5 RET C 1 309 311 RET RET . LB 6 HOH A 1 401 9 HOH HOH . LB 6 HOH A 2 402 45 HOH HOH . LB 6 HOH A 3 403 42 HOH HOH . LB 6 HOH A 4 404 19 HOH HOH . LB 6 HOH A 5 405 1 HOH HOH . LB 6 HOH A 6 406 25 HOH HOH . LB 6 HOH A 7 407 49 HOH HOH . LB 6 HOH A 8 408 82 HOH HOH . LB 6 HOH A 9 409 51 HOH HOH . LB 6 HOH A 10 410 2 HOH HOH . LB 6 HOH A 11 411 83 HOH HOH . LB 6 HOH A 12 412 81 HOH HOH . LB 6 HOH A 13 413 89 HOH HOH . LB 6 HOH A 14 414 52 HOH HOH . LB 6 HOH A 15 415 84 HOH HOH . MB 6 HOH B 1 401 10 HOH HOH . MB 6 HOH B 2 402 31 HOH HOH . MB 6 HOH B 3 403 54 HOH HOH . MB 6 HOH B 4 404 3 HOH HOH . MB 6 HOH B 5 405 70 HOH HOH . MB 6 HOH B 6 406 20 HOH HOH . MB 6 HOH B 7 407 36 HOH HOH . MB 6 HOH B 8 408 15 HOH HOH . MB 6 HOH B 9 409 53 HOH HOH . MB 6 HOH B 10 410 69 HOH HOH . MB 6 HOH B 11 411 55 HOH HOH . MB 6 HOH B 12 412 44 HOH HOH . MB 6 HOH B 13 413 43 HOH HOH . NB 6 HOH D 1 401 11 HOH HOH . NB 6 HOH D 2 402 63 HOH HOH . NB 6 HOH D 3 403 79 HOH HOH . NB 6 HOH D 4 404 64 HOH HOH . NB 6 HOH D 5 405 62 HOH HOH . NB 6 HOH D 6 406 26 HOH HOH . NB 6 HOH D 7 407 28 HOH HOH . NB 6 HOH D 8 408 21 HOH HOH . NB 6 HOH D 9 409 4 HOH HOH . NB 6 HOH D 10 410 57 HOH HOH . NB 6 HOH D 11 411 5 HOH HOH . NB 6 HOH D 12 412 80 HOH HOH . NB 6 HOH D 13 413 88 HOH HOH . NB 6 HOH D 14 414 17 HOH HOH . NB 6 HOH D 15 415 27 HOH HOH . NB 6 HOH D 16 416 60 HOH HOH . NB 6 HOH D 17 417 61 HOH HOH . NB 6 HOH D 18 418 59 HOH HOH . NB 6 HOH D 19 419 74 HOH HOH . NB 6 HOH D 20 420 40 HOH HOH . NB 6 HOH D 21 421 71 HOH HOH . NB 6 HOH D 22 422 41 HOH HOH . NB 6 HOH D 23 423 58 HOH HOH . OB 6 HOH E 1 401 12 HOH HOH . OB 6 HOH E 2 402 87 HOH HOH . OB 6 HOH E 3 403 73 HOH HOH . OB 6 HOH E 4 404 67 HOH HOH . OB 6 HOH E 5 405 22 HOH HOH . OB 6 HOH E 6 406 72 HOH HOH . OB 6 HOH E 7 407 14 HOH HOH . OB 6 HOH E 8 408 30 HOH HOH . OB 6 HOH E 9 409 68 HOH HOH . OB 6 HOH E 10 410 34 HOH HOH . OB 6 HOH E 11 411 29 HOH HOH . OB 6 HOH E 12 412 6 HOH HOH . OB 6 HOH E 13 413 38 HOH HOH . PB 6 HOH F 1 401 8 HOH HOH . PB 6 HOH F 2 402 16 HOH HOH . PB 6 HOH F 3 403 39 HOH HOH . PB 6 HOH F 4 404 32 HOH HOH . PB 6 HOH F 5 405 78 HOH HOH . PB 6 HOH F 6 406 23 HOH HOH . PB 6 HOH F 7 407 18 HOH HOH . PB 6 HOH F 8 408 7 HOH HOH . PB 6 HOH F 9 409 66 HOH HOH . PB 6 HOH F 10 410 65 HOH HOH . QB 6 HOH C 1 401 13 HOH HOH . QB 6 HOH C 2 402 77 HOH HOH . QB 6 HOH C 3 403 35 HOH HOH . QB 6 HOH C 4 404 75 HOH HOH . QB 6 HOH C 5 405 33 HOH HOH . QB 6 HOH C 6 406 24 HOH HOH . QB 6 HOH C 7 407 37 HOH HOH . QB 6 HOH C 8 408 46 HOH HOH . QB 6 HOH C 9 409 47 HOH HOH . QB 6 HOH C 10 410 76 HOH HOH . QB 6 HOH C 11 411 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . KA 4 42.671 41.536 53.67 1 57.71 ? C1 OLA 303 E 1 HETATM 2 O O1 OLA . . . KA 4 43.108 42.193 52.701 1 60.26 ? O1 OLA 303 E 1 HETATM 3 O O2 OLA . . . KA 4 41.976 42.123 54.526 1 65.95 ? O2 OLA 303 E 1 HETATM 4 C C2 OLA . . . KA 4 42.976 40.065 53.815 1 45.37 ? C2 OLA 303 E 1 HETATM 5 C C3 OLA . . . KA 4 42.057 39.25 52.915 1 43.71 ? C3 OLA 303 E 1 HETATM 6 C C4 OLA . . . KA 4 42.413 37.772 53.012 1 50.05 ? C4 OLA 303 E 1 HETATM 7 C C5 OLA . . . KA 4 41.897 36.999 51.806 1 48.47 ? C5 OLA 303 E 1 HETATM 8 C C6 OLA . . . KA 4 42.142 35.503 51.963 1 49.7 ? C6 OLA 303 E 1 HETATM 9 C C7 OLA . . . KA 4 41.052 34.713 51.253 1 56.54 ? C7 OLA 303 E 1 HETATM 10 C C8 OLA . . . KA 4 41.289 33.209 51.321 1 52.47 ? C8 OLA 303 E 1 HETATM 11 C C9 OLA . . . KA 4 40.035 32.523 50.835 1 62.62 ? C9 OLA 303 E 1 HETATM 12 C C10 OLA . . . KA 4 39.927 31.057 50.816 1 64.7 ? C10 OLA 303 E 1 HETATM 13 C C11 OLA . . . KA 4 40.75 30.243 49.848 1 62.55 ? C11 OLA 303 E 1 HETATM 14 C C12 OLA . . . KA 4 40.411 28.766 50.01 1 60.24 ? C12 OLA 303 E 1 HETATM 15 C C13 OLA . . . KA 4 38.933 28.493 49.75 1 53.42 ? C13 OLA 303 E 1 HETATM 16 C C14 OLA . . . KA 4 38.748 27.554 48.565 1 58.97 ? C14 OLA 303 E 1 HETATM 17 C C15 OLA . . . KA 4 37.28 27.45 48.165 1 71.92 ? C15 OLA 303 E 1 HETATM 18 C C16 OLA . . . KA 4 37.045 26.26 47.24 1 69.53 ? C16 OLA 303 E 1 HETATM 19 C C17 OLA . . . KA 4 36.986 24.954 48.026 1 66.98 ? C17 OLA 303 E 1 HETATM 20 C C18 OLA . . . KA 4 36.961 23.747 47.095 1 55.27 ? C18 OLA 303 E 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #