data_8XXV # _model_server_result.job_id T1ajt2SjuX7OMUn9qmw96g _model_server_result.datetime_utc '2025-03-05 02:37:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8xxv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 8XXV # _exptl.entry_id 8XXV _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 357.788 _entity.id 7 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description INDOMETHACIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 11 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 11 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 199 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 199 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H16 Cl N O4' _chem_comp.formula_weight 357.788 _chem_comp.id IMN _chem_comp.mon_nstd_flag . _chem_comp.name INDOMETHACIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 IMN doub 311 n y C C5 IMN sing 312 n y C N IMN sing 313 n y C1 C2 IMN sing 314 n y C1 C7 IMN sing 315 n y C2 C3 IMN doub 316 n y C2 H2 IMN sing 317 n n C3 C4 IMN sing 318 n y C3 O IMN sing 319 n n C4 C5 IMN doub 320 n y C4 H4 IMN sing 321 n n C5 H5 IMN sing 322 n n C6 O IMN sing 323 n n C6 H61 IMN sing 324 n n C6 H62 IMN sing 325 n n C6 H63 IMN sing 326 n n C7 C8 IMN doub 327 n y C7 C17 IMN sing 328 n n C8 C16 IMN sing 329 n n C8 N IMN sing 330 n y C9 C10 IMN sing 331 n n C9 N IMN sing 332 n n C9 O1 IMN doub 333 n n C10 C11 IMN doub 334 n y C10 C15 IMN sing 335 n y C11 C12 IMN sing 336 n y C11 H11 IMN sing 337 n n C12 C13 IMN doub 338 n y C12 H12 IMN sing 339 n n C13 C14 IMN sing 340 n y C13 CL IMN sing 341 n n C14 C15 IMN doub 342 n y C14 H14 IMN sing 343 n n C15 H15 IMN sing 344 n n C16 H161 IMN sing 345 n n C16 H162 IMN sing 346 n n C16 H163 IMN sing 347 n n C17 C18 IMN sing 348 n n C17 H171 IMN sing 349 n n C17 H172 IMN sing 350 n n C18 O2 IMN doub 351 n n C18 O3 IMN sing 352 n n O3 HO3 IMN sing 353 n n # _atom_sites.entry_id 8XXV _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 A1D5Q A 1 401 401 A1D5Q NEW . G 7 IMN A 1 402 401 IMN LIG . H 8 HOH A 1 501 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C IMN . . . G 7 125.594 106.713 85.223 1 20 ? C IMN 402 A 1 HETATM 2 C C1 IMN . . . G 7 126.374 107.667 84.62 1 20 ? C1 IMN 402 A 1 HETATM 3 C C2 IMN . . . G 7 127.343 107.283 83.679 1 20 ? C2 IMN 402 A 1 HETATM 4 C C3 IMN . . . G 7 127.525 105.94 83.359 1 20 ? C3 IMN 402 A 1 HETATM 5 C C4 IMN . . . G 7 126.746 104.981 83.954 1 20 ? C4 IMN 402 A 1 HETATM 6 C C5 IMN . . . G 7 125.802 105.368 84.867 1 20 ? C5 IMN 402 A 1 HETATM 7 C C6 IMN . . . G 7 129.053 104.266 82.789 1 20 ? C6 IMN 402 A 1 HETATM 8 C C7 IMN . . . G 7 125.957 108.901 85.158 1 20 ? C7 IMN 402 A 1 HETATM 9 C C8 IMN . . . G 7 124.936 108.614 86.053 1 20 ? C8 IMN 402 A 1 HETATM 10 C C9 IMN . . . G 7 123.772 106.502 86.888 1 20 ? C9 IMN 402 A 1 HETATM 11 C C10 IMN . . . G 7 122.692 106.936 87.867 1 20 ? C10 IMN 402 A 1 HETATM 12 C C11 IMN . . . G 7 122.52 106.226 89.036 1 20 ? C11 IMN 402 A 1 HETATM 13 C C12 IMN . . . G 7 121.496 106.562 89.892 1 20 ? C12 IMN 402 A 1 HETATM 14 C C13 IMN . . . G 7 120.64 107.585 89.568 1 20 ? C13 IMN 402 A 1 HETATM 15 C C14 IMN . . . G 7 120.788 108.264 88.378 1 20 ? C14 IMN 402 A 1 HETATM 16 C C15 IMN . . . G 7 121.792 107.921 87.513 1 20 ? C15 IMN 402 A 1 HETATM 17 C C16 IMN . . . G 7 124.232 109.712 86.838 1 20 ? C16 IMN 402 A 1 HETATM 18 C C17 IMN . . . G 7 126.5 110.293 84.826 1 20 ? C17 IMN 402 A 1 HETATM 19 C C18 IMN . . . G 7 127.891 110.536 85.388 1 20 ? C18 IMN 402 A 1 HETATM 20 N N IMN . . . G 7 124.726 107.295 86.084 1 20 ? N IMN 402 A 1 HETATM 21 O O IMN . . . G 7 128.461 105.486 82.429 1 20 ? O IMN 402 A 1 HETATM 22 O O1 IMN . . . G 7 123.727 105.336 86.763 1 20 ? O1 IMN 402 A 1 HETATM 23 O O2 IMN . . . G 7 128.406 109.672 86.118 1 20 ? O2 IMN 402 A 1 HETATM 24 O O3 IMN . . . G 7 128.524 111.593 85.158 1 20 ? O3 IMN 402 A 1 HETATM 25 CL CL IMN . . . G 7 119.329 108.031 90.679 1 20 ? CL IMN 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #