data_8XYI # _model_server_result.job_id -uGuqTxf9M82v2uFTq-U-A _model_server_result.datetime_utc '2025-03-03 03:17:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8xyi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8XYI # _exptl.entry_id 8XYI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 644.802 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3~{S})-~{N}-[(2~{S})-6-azanyl-1-(2,2-diphenylethylamino)-1-oxidanylidene-hexan-2-yl]-2-(4-oxidanylidene-4-phenyl-butanoyl)-3,4-dihydro-1~{H}-isoquinoline-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8XYI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8XYI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 180 _struct_conn.ptnr1_auth_asym_id R _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 124 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 259 _struct_conn.ptnr2_auth_asym_id R _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 203 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.028 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C40 H44 N4 O4' _chem_comp.formula_weight 644.802 _chem_comp.id A1LW1 _chem_comp.mon_nstd_flag . _chem_comp.name (3~{S})-~{N}-[(2~{S})-6-azanyl-1-(2,2-diphenylethylamino)-1-oxidanylidene-hexan-2-yl]-2-(4-oxidanylidene-4-phenyl-butanoyl)-3,4-dihydro-1~{H}-isoquinoline-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N31 C30 A1LW1 sing 1 n n C30 C29 A1LW1 sing 2 n n C8 C9 A1LW1 doub 3 n y C8 C7 A1LW1 sing 4 n y C29 C28 A1LW1 sing 5 n n C28 C27 A1LW1 sing 6 n n C9 C10 A1LW1 sing 7 n y C7 C6 A1LW1 doub 8 n y C10 C5 A1LW1 doub 9 n y C10 C1 A1LW1 sing 10 n n C27 C26 A1LW1 sing 11 n n C6 C5 A1LW1 sing 12 n y C26 N25 A1LW1 sing 13 n n C26 C32 A1LW1 sing 14 n n O24 C23 A1LW1 doub 15 n n C5 C4 A1LW1 sing 16 n n C1 C2 A1LW1 sing 17 n n N25 C23 A1LW1 sing 18 n n O33 C32 A1LW1 doub 19 n n C23 C2 A1LW1 sing 20 n n C32 N34 A1LW1 sing 21 n n C2 N3 A1LW1 sing 22 n n C4 N3 A1LW1 sing 23 n n N34 C35 A1LW1 sing 24 n n N3 C11 A1LW1 sing 25 n n C45 C46 A1LW1 doub 26 n y C45 C44 A1LW1 sing 27 n y C46 C47 A1LW1 sing 28 n y C44 C43 A1LW1 doub 29 n y C47 C48 A1LW1 doub 30 n y C43 C48 A1LW1 sing 31 n y C43 C36 A1LW1 sing 32 n n O16 C15 A1LW1 doub 33 n n C35 C36 A1LW1 sing 34 n n C36 C37 A1LW1 sing 35 n n C11 O12 A1LW1 doub 36 n n C11 C13 A1LW1 sing 37 n n C14 C15 A1LW1 sing 38 n n C14 C13 A1LW1 sing 39 n n C15 C17 A1LW1 sing 40 n n C22 C17 A1LW1 doub 41 n y C22 C21 A1LW1 sing 42 n y C37 C38 A1LW1 doub 43 n y C37 C42 A1LW1 sing 44 n y C17 C18 A1LW1 sing 45 n y C38 C39 A1LW1 sing 46 n y C21 C20 A1LW1 doub 47 n y C42 C41 A1LW1 doub 48 n y C18 C19 A1LW1 doub 49 n y C39 C40 A1LW1 doub 50 n y C20 C19 A1LW1 sing 51 n y C41 C40 A1LW1 sing 52 n y C4 H1 A1LW1 sing 53 n n C4 H2 A1LW1 sing 54 n n C6 H3 A1LW1 sing 55 n n C7 H4 A1LW1 sing 56 n n C8 H5 A1LW1 sing 57 n n C13 H6 A1LW1 sing 58 n n C13 H7 A1LW1 sing 59 n n C20 H8 A1LW1 sing 60 n n C21 H9 A1LW1 sing 61 n n C22 H10 A1LW1 sing 62 n n C26 H11 A1LW1 sing 63 n n C28 H12 A1LW1 sing 64 n n C28 H13 A1LW1 sing 65 n n C1 H14 A1LW1 sing 66 n n C1 H15 A1LW1 sing 67 n n C14 H16 A1LW1 sing 68 n n C14 H17 A1LW1 sing 69 n n C18 H18 A1LW1 sing 70 n n C19 H19 A1LW1 sing 71 n n C2 H20 A1LW1 sing 72 n n C27 H21 A1LW1 sing 73 n n C27 H22 A1LW1 sing 74 n n C29 H23 A1LW1 sing 75 n n C29 H24 A1LW1 sing 76 n n C30 H25 A1LW1 sing 77 n n C30 H26 A1LW1 sing 78 n n C35 H27 A1LW1 sing 79 n n C35 H28 A1LW1 sing 80 n n C36 H29 A1LW1 sing 81 n n C38 H30 A1LW1 sing 82 n n C39 H31 A1LW1 sing 83 n n C40 H32 A1LW1 sing 84 n n C41 H33 A1LW1 sing 85 n n C42 H34 A1LW1 sing 86 n n C44 H35 A1LW1 sing 87 n n C45 H36 A1LW1 sing 88 n n C46 H37 A1LW1 sing 89 n n C47 H38 A1LW1 sing 90 n n C48 H39 A1LW1 sing 91 n n C9 H40 A1LW1 sing 92 n n N25 H41 A1LW1 sing 93 n n N31 H42 A1LW1 sing 94 n n N31 H44 A1LW1 sing 95 n n N34 H45 A1LW1 sing 96 n n # _atom_sites.entry_id 8XYI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id A1LW1 _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id A1LW1 _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 A1LW1 . . . B 2 134.659 117.745 88.379 1 96.86 ? N3 A1LW1 401 R 1 HETATM 2 C C4 A1LW1 . . . B 2 135.507 116.642 87.915 1 95.55 ? C4 A1LW1 401 R 1 HETATM 3 C C5 A1LW1 . . . B 2 135.972 116.772 86.486 1 94.24 ? C5 A1LW1 401 R 1 HETATM 4 C C6 A1LW1 . . . B 2 136.516 115.669 85.831 1 93.31 ? C6 A1LW1 401 R 1 HETATM 5 C C7 A1LW1 . . . B 2 136.961 115.77 84.525 1 97.79 ? C7 A1LW1 401 R 1 HETATM 6 C C8 A1LW1 . . . B 2 136.87 116.969 83.857 1 97.96 ? C8 A1LW1 401 R 1 HETATM 7 C C10 A1LW1 . . . B 2 135.879 117.993 85.806 1 97.31 ? C10 A1LW1 401 R 1 HETATM 8 C C13 A1LW1 . . . B 2 134.002 116.505 90.393 1 96.53 ? C13 A1LW1 401 R 1 HETATM 9 C C15 A1LW1 . . . B 2 133.082 114.236 89.836 1 103.93 ? C15 A1LW1 401 R 1 HETATM 10 C C17 A1LW1 . . . B 2 132.21 113.433 90.74 1 101.09 ? C17 A1LW1 401 R 1 HETATM 11 C C20 A1LW1 . . . B 2 130.553 111.904 92.374 1 100.36 ? C20 A1LW1 401 R 1 HETATM 12 C C21 A1LW1 . . . B 2 131.338 111.293 91.419 1 96.48 ? C21 A1LW1 401 R 1 HETATM 13 C C22 A1LW1 . . . B 2 132.164 112.049 90.604 1 94.44 ? C22 A1LW1 401 R 1 HETATM 14 C C26 A1LW1 . . . B 2 131.274 116.844 86.074 1 93.91 ? C26 A1LW1 401 R 1 HETATM 15 C C28 A1LW1 . . . B 2 131.768 114.908 84.474 1 97.44 ? C28 A1LW1 401 R 1 HETATM 16 C C1 A1LW1 . . . B 2 135.3 119.198 86.502 1 99.4 ? C1 A1LW1 401 R 1 HETATM 17 C C11 A1LW1 . . . B 2 134.262 117.807 89.669 1 96.38 ? C11 A1LW1 401 R 1 HETATM 18 C C14 A1LW1 . . . B 2 132.871 115.727 89.753 1 101.72 ? C14 A1LW1 401 R 1 HETATM 19 C C18 A1LW1 . . . B 2 131.414 114.04 91.708 1 99.38 ? C18 A1LW1 401 R 1 HETATM 20 C C19 A1LW1 . . . B 2 130.591 113.275 92.517 1 98.54 ? C19 A1LW1 401 R 1 HETATM 21 C C2 A1LW1 . . . B 2 134.203 118.823 87.49 1 98.71 ? C2 A1LW1 401 R 1 HETATM 22 C C23 A1LW1 . . . B 2 132.893 118.519 86.764 1 100.42 ? C23 A1LW1 401 R 1 HETATM 23 C C27 A1LW1 . . . B 2 131.198 115.338 85.821 1 92.11 ? C27 A1LW1 401 R 1 HETATM 24 C C29 A1LW1 . . . B 2 133.251 115.18 84.31 1 100.38 ? C29 A1LW1 401 R 1 HETATM 25 C C30 A1LW1 . . . B 2 133.796 114.661 83 1 100.11 ? C30 A1LW1 401 R 1 HETATM 26 C C32 A1LW1 . . . B 2 130.167 117.289 87.03 1 100.02 ? C32 A1LW1 401 R 1 HETATM 27 C C35 A1LW1 . . . B 2 129.63 117.892 89.364 1 98.06 ? C35 A1LW1 401 R 1 HETATM 28 C C36 A1LW1 . . . B 2 128.264 117.197 89.372 1 95.15 ? C36 A1LW1 401 R 1 HETATM 29 C C37 A1LW1 . . . B 2 127.549 117.527 90.674 1 96.34 ? C37 A1LW1 401 R 1 HETATM 30 C C38 A1LW1 . . . B 2 127.002 118.786 90.882 1 100.59 ? C38 A1LW1 401 R 1 HETATM 31 C C39 A1LW1 . . . B 2 126.358 119.089 92.069 1 101.94 ? C39 A1LW1 401 R 1 HETATM 32 C C40 A1LW1 . . . B 2 126.253 118.141 93.063 1 102.1 ? C40 A1LW1 401 R 1 HETATM 33 C C41 A1LW1 . . . B 2 126.792 116.887 92.871 1 96.25 ? C41 A1LW1 401 R 1 HETATM 34 C C42 A1LW1 . . . B 2 127.437 116.58 91.685 1 95.28 ? C42 A1LW1 401 R 1 HETATM 35 C C43 A1LW1 . . . B 2 128.233 115.701 89.086 1 95.86 ? C43 A1LW1 401 R 1 HETATM 36 C C44 A1LW1 . . . B 2 127.036 115.081 88.753 1 97.22 ? C44 A1LW1 401 R 1 HETATM 37 C C45 A1LW1 . . . B 2 126.991 113.72 88.506 1 100.37 ? C45 A1LW1 401 R 1 HETATM 38 C C46 A1LW1 . . . B 2 128.138 112.961 88.589 1 100.38 ? C46 A1LW1 401 R 1 HETATM 39 C C47 A1LW1 . . . B 2 129.332 113.563 88.919 1 100.14 ? C47 A1LW1 401 R 1 HETATM 40 C C48 A1LW1 . . . B 2 129.381 114.924 89.167 1 99.86 ? C48 A1LW1 401 R 1 HETATM 41 C C9 A1LW1 . . . B 2 136.332 118.075 84.492 1 96.65 ? C9 A1LW1 401 R 1 HETATM 42 N N25 A1LW1 . . . B 2 132.568 117.231 86.611 1 99.13 ? N25 A1LW1 401 R 1 HETATM 43 N N31 A1LW1 . . . B 2 133.104 115.274 81.839 1 100.27 ? N31 A1LW1 401 R 1 HETATM 44 N N34 A1LW1 . . . B 2 130.529 117.455 88.304 1 103.43 ? N34 A1LW1 401 R 1 HETATM 45 O O12 A1LW1 . . . B 2 134.115 118.879 90.233 1 95.18 ? O12 A1LW1 401 R 1 HETATM 46 O O16 A1LW1 . . . B 2 133.949 113.701 89.169 1 101.32 ? O16 A1LW1 401 R 1 HETATM 47 O O24 A1LW1 . . . B 2 132.192 119.435 86.346 1 103.31 ? O24 A1LW1 401 R 1 HETATM 48 O O33 A1LW1 . . . B 2 129.024 117.473 86.624 1 100.82 ? O33 A1LW1 401 R 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #