data_8Y2M
#
_model_server_result.job_id            h_FvrKLOGwVJ6exNwbEDQA 
_model_server_result.datetime_utc      '2024-12-26 16:23:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8y2m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":503}' 
#
_entry.id    8Y2M 
#
_exptl.entry_id    8Y2M 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              396.69 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'hexacosanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8Y2M 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8Y2M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 53 B CYS 53 1_555 B SG CYS 75 B CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 102 B CYS 102 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 D SG CYS 53 D CYS 53 1_555 D SG CYS 75 D CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 D SG CYS 102 D CYS 102 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C26 H52 O2' 
_chem_comp.formula_weight    396.69 
_chem_comp.id                7PO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'hexacosanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C02 7PO sing 137 n n 
C03 C02 7PO sing 138 n n 
C03 C04 7PO sing 139 n n 
C05 C04 7PO sing 140 n n 
C05 C06 7PO sing 141 n n 
C07 C06 7PO sing 142 n n 
C07 C08 7PO sing 143 n n 
C09 C08 7PO sing 144 n n 
C09 C10 7PO sing 145 n n 
C11 C10 7PO sing 146 n n 
C11 C12 7PO sing 147 n n 
C13 C12 7PO sing 148 n n 
C13 C14 7PO sing 149 n n 
C14 C15 7PO sing 150 n n 
C15 C16 7PO sing 151 n n 
C16 C17 7PO sing 152 n n 
C17 C18 7PO sing 153 n n 
C18 C19 7PO sing 154 n n 
C19 C20 7PO sing 155 n n 
C20 C21 7PO sing 156 n n 
C21 C22 7PO sing 157 n n 
C22 C23 7PO sing 158 n n 
C23 C24 7PO sing 159 n n 
C24 C25 7PO sing 160 n n 
O28 C26 7PO doub 161 n n 
C25 C26 7PO sing 162 n n 
C26 O27 7PO sing 163 n n 
C10 H1 7PO sing 164 n n 
C10 H2 7PO sing 165 n n 
C13 H3 7PO sing 166 n n 
C13 H4 7PO sing 167 n n 
C15 H5 7PO sing 168 n n 
C15 H6 7PO sing 169 n n 
C17 H7 7PO sing 170 n n 
C17 H8 7PO sing 171 n n 
C20 H9 7PO sing 172 n n 
C20 H10 7PO sing 173 n n 
C21 H11 7PO sing 174 n n 
C21 H12 7PO sing 175 n n 
C22 H13 7PO sing 176 n n 
C22 H14 7PO sing 177 n n 
C24 H15 7PO sing 178 n n 
C24 H16 7PO sing 179 n n 
C01 H17 7PO sing 180 n n 
C01 H18 7PO sing 181 n n 
C01 H19 7PO sing 182 n n 
C02 H20 7PO sing 183 n n 
C02 H21 7PO sing 184 n n 
C03 H22 7PO sing 185 n n 
C03 H23 7PO sing 186 n n 
C04 H24 7PO sing 187 n n 
C04 H25 7PO sing 188 n n 
C05 H26 7PO sing 189 n n 
C05 H27 7PO sing 190 n n 
C06 H28 7PO sing 191 n n 
C06 H29 7PO sing 192 n n 
C07 H30 7PO sing 193 n n 
C07 H31 7PO sing 194 n n 
C08 H32 7PO sing 195 n n 
C08 H33 7PO sing 196 n n 
C09 H34 7PO sing 197 n n 
C09 H35 7PO sing 198 n n 
C11 H36 7PO sing 199 n n 
C11 H37 7PO sing 200 n n 
C12 H38 7PO sing 201 n n 
C12 H39 7PO sing 202 n n 
C14 H40 7PO sing 203 n n 
C14 H41 7PO sing 204 n n 
C16 H42 7PO sing 205 n n 
C16 H43 7PO sing 206 n n 
C18 H44 7PO sing 207 n n 
C18 H45 7PO sing 208 n n 
C19 H46 7PO sing 209 n n 
C19 H47 7PO sing 210 n n 
C23 H48 7PO sing 211 n n 
C23 H49 7PO sing 212 n n 
C25 H50 7PO sing 213 n n 
C25 H51 7PO sing 214 n n 
O27 H52 7PO sing 215 n n 
#
_atom_sites.entry_id                     8Y2M 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 6PL A 1 501 3 6PL 6PL . 
F 4 A1D5V A 1 502 1 A1D5V DRG . 
G 5 7PO A 1 503 1 7PO 7PO . 
H 3 6PL B 1 201 1 6PL 6PL . 
I 3 6PL B 1 202 2 6PL 6PL . 
J 3 6PL C 1 501 6 6PL 6PL . 
K 4 A1D5V C 1 502 2 A1D5V DRG . 
L 5 7PO C 1 503 2 7PO 7PO . 
M 3 6PL D 1 201 4 6PL 6PL . 
N 3 6PL D 1 202 5 6PL 6PL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 7PO . . . L 5 144.712 160.35 129.583 1 30 ? C10 7PO 503 C 1 
HETATM 2 C C13 7PO . . . L 5 146.247 162.841 131.941 1 30 ? C13 7PO 503 C 1 
HETATM 3 C C15 7PO . . . L 5 148.426 163.391 133.349 1 30 ? C15 7PO 503 C 1 
HETATM 4 C C17 7PO . . . L 5 150.978 162.849 134.28 1 30 ? C17 7PO 503 C 1 
HETATM 5 C C20 7PO . . . L 5 151.847 163.27 137.228 1 30 ? C20 7PO 503 C 1 
HETATM 6 C C21 7PO . . . L 5 151.49 163.897 138.561 1 30 ? C21 7PO 503 C 1 
HETATM 7 C C22 7PO . . . L 5 152.697 164.197 139.377 1 30 ? C22 7PO 503 C 1 
HETATM 8 C C24 7PO . . . L 5 153.293 164.941 141.686 1 30 ? C24 7PO 503 C 1 
HETATM 9 C C26 7PO . . . L 5 155.807 165.007 142.543 1 30 ? C26 7PO 503 C 1 
HETATM 10 C C01 7PO . . . L 5 137.328 155.403 123.459 1 30 ? C01 7PO 503 C 1 
HETATM 11 C C02 7PO . . . L 5 138.778 155.463 123.4 1 30 ? C02 7PO 503 C 1 
HETATM 12 C C03 7PO . . . L 5 139.319 155.181 124.749 1 30 ? C03 7PO 503 C 1 
HETATM 13 C C04 7PO . . . L 5 140.597 155.823 125.302 1 30 ? C04 7PO 503 C 1 
HETATM 14 C C05 7PO . . . L 5 140.559 156.469 126.675 1 30 ? C05 7PO 503 C 1 
HETATM 15 C C06 7PO . . . L 5 141.65 157.5 126.98 1 30 ? C06 7PO 503 C 1 
HETATM 16 C C07 7PO . . . L 5 142.046 157.702 128.448 1 30 ? C07 7PO 503 C 1 
HETATM 17 C C08 7PO . . . L 5 142.9 158.914 128.528 1 30 ? C08 7PO 503 C 1 
HETATM 18 C C09 7PO . . . L 5 143.8 159.141 129.717 1 30 ? C09 7PO 503 C 1 
HETATM 19 C C11 7PO . . . L 5 145.061 161.062 130.825 1 30 ? C11 7PO 503 C 1 
HETATM 20 C C12 7PO . . . L 5 146.046 162.163 130.619 1 30 ? C12 7PO 503 C 1 
HETATM 21 C C14 7PO . . . L 5 147.528 163.609 132.091 1 30 ? C14 7PO 503 C 1 
HETATM 22 C C16 7PO . . . L 5 149.933 162.992 133.194 1 30 ? C16 7PO 503 C 1 
HETATM 23 C C18 7PO . . . L 5 150.018 162.828 135.373 1 30 ? C18 7PO 503 C 1 
HETATM 24 C C19 7PO . . . L 5 150.434 163.421 136.697 1 30 ? C19 7PO 503 C 1 
HETATM 25 C C23 7PO . . . L 5 152.45 165.247 140.44 1 30 ? C23 7PO 503 C 1 
HETATM 26 C C25 7PO . . . L 5 154.795 164.794 141.396 1 30 ? C25 7PO 503 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           26 
#