data_8Y40 # _model_server_result.job_id QxCTH0cQh_wjeWm25WrhLQ _model_server_result.datetime_utc '2025-03-05 03:32:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8y40 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":5101}' # _entry.id 8Y40 # _exptl.entry_id 8Y40 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 483.146 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 12-meric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 R N N ? 4 W N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 I OE1 GLU 3967 A GLU 3967 1_555 O CA CA . A CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc2 I OE2 GLU 3967 A GLU 3967 1_555 O CA CA . A CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.118 ? metalc ? metalc3 I SG CYS 4961 A CYS 4961 1_555 N ZN ZN . A ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc4 I ND1 HIS 4978 A HIS 4978 1_555 N ZN ZN . A ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc5 I O THR 5001 A THR 5001 1_555 O CA CA . A CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc6 J OE1 GLU 3967 B GLU 3967 1_555 T CA CA . B CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc7 J OE2 GLU 3967 B GLU 3967 1_555 T CA CA . B CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.113 ? metalc ? metalc8 J SG CYS 4961 B CYS 4961 1_555 S ZN ZN . B ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc9 J ND1 HIS 4978 B HIS 4978 1_555 S ZN ZN . B ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc10 J O THR 5001 B THR 5001 1_555 T CA CA . B CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc11 K OE1 GLU 3967 C GLU 3967 1_555 Y CA CA . C CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc12 K OE2 GLU 3967 C GLU 3967 1_555 Y CA CA . C CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.112 ? metalc ? metalc13 K SG CYS 4961 C CYS 4961 1_555 X ZN ZN . C ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc14 K ND1 HIS 4978 C HIS 4978 1_555 X ZN ZN . C ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc15 K O THR 5001 C THR 5001 1_555 Y CA CA . C CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc16 L OE1 GLU 3967 D GLU 3967 1_555 DA CA CA . D CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc17 L OE2 GLU 3967 D GLU 3967 1_555 DA CA CA . D CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.117 ? metalc ? metalc18 L SG CYS 4961 D CYS 4961 1_555 CA ZN ZN . D ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc19 L ND1 HIS 4978 D HIS 4978 1_555 CA ZN ZN . D ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc20 L O THR 5001 D THR 5001 1_555 DA CA CA . D CA 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? # _chem_comp.formula 'C18 H14 Br Cl2 N5 O2' _chem_comp.formula_weight 483.146 _chem_comp.id F0U _chem_comp.mon_nstd_flag . _chem_comp.name 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAZ CAY F0U doub 157 n y CAZ NBA F0U sing 158 n y CAY CAX F0U sing 159 n y NBA CAU F0U doub 160 n y CAX CAV F0U doub 161 n y CAJ NAI F0U sing 162 n n CAU CAV F0U sing 163 n y CAU NAT F0U sing 164 n n CAV CL2 F0U sing 165 n n NAI CAH F0U sing 166 n n NAT NAS F0U sing 167 n y NAT CAO F0U sing 168 n y OBB CAN F0U doub 169 n n NAS CAQ F0U doub 170 n y CAH OAK F0U doub 171 n n CAH CAG F0U sing 172 n n CAO CAN F0U sing 173 n n CAO CAP F0U doub 174 n y CAN NAM F0U sing 175 n n CAQ CAP F0U sing 176 n y CAQ BR F0U sing 177 n n CAG CAF F0U doub 178 n y CAG CAL F0U sing 179 n y CAF CAD F0U sing 180 n y NAM CAL F0U sing 181 n n CAL CAB F0U doub 182 n y CAD CL1 F0U sing 183 n n CAD CAC F0U doub 184 n y CAB CAC F0U sing 185 n y CAB CAA F0U sing 186 n n CAA H1 F0U sing 187 n n CAA H2 F0U sing 188 n n CAA H3 F0U sing 189 n n CAC H4 F0U sing 190 n n CAF H5 F0U sing 191 n n CAJ H6 F0U sing 192 n n CAJ H7 F0U sing 193 n n CAJ H8 F0U sing 194 n n CAP H9 F0U sing 195 n n CAX H10 F0U sing 196 n n CAY H11 F0U sing 197 n n CAZ H12 F0U sing 198 n n NAI H13 F0U sing 199 n n NAM H14 F0U sing 200 n n # _atom_sites.entry_id 8Y40 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 F0U A 1 5101 1 F0U CHL . N 5 ZN A 1 5102 1 ZN ZN . O 6 CA A 1 5103 1 CA CA . P 7 ATP A 1 5104 1 ATP ATP . Q 8 CFF A 1 5105 1 CFF CFF . R 4 F0U B 1 5101 2 F0U CHL . S 5 ZN B 1 5102 2 ZN ZN . T 6 CA B 1 5103 2 CA CA . U 7 ATP B 1 5104 2 ATP ATP . V 8 CFF B 1 5105 2 CFF CFF . W 4 F0U C 1 5101 3 F0U CHL . X 5 ZN C 1 5102 3 ZN ZN . Y 6 CA C 1 5103 3 CA CA . Z 7 ATP C 1 5104 3 ATP ATP . AA 8 CFF C 1 5105 3 CFF CFF . BA 4 F0U D 1 5101 4 F0U CHL . CA 5 ZN D 1 5102 4 ZN ZN . DA 6 CA D 1 5103 4 CA CA . EA 7 ATP D 1 5104 4 ATP ATP . FA 8 CFF D 1 5105 4 CFF CFF . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA F0U . . . W 4 299.803 252.811 343.024 1 81.65 ? CAA F0U 5101 C 1 HETATM 2 C CAB F0U . . . W 4 300.558 253.984 342.403 1 81.65 ? CAB F0U 5101 C 1 HETATM 3 C CAC F0U . . . W 4 301.946 254.03 342.566 1 81.65 ? CAC F0U 5101 C 1 HETATM 4 C CAD F0U . . . W 4 302.699 255.009 341.918 1 81.65 ? CAD F0U 5101 C 1 HETATM 5 C CAF F0U . . . W 4 302.078 255.943 341.09 1 81.65 ? CAF F0U 5101 C 1 HETATM 6 C CAG F0U . . . W 4 300.681 255.928 340.921 1 81.65 ? CAG F0U 5101 C 1 HETATM 7 C CAH F0U . . . W 4 300.089 256.883 339.924 1 81.65 ? CAH F0U 5101 C 1 HETATM 8 C CAJ F0U . . . W 4 298.164 258.346 339.345 1 81.65 ? CAJ F0U 5101 C 1 HETATM 9 C CAL F0U . . . W 4 299.914 254.955 341.606 1 81.65 ? CAL F0U 5101 C 1 HETATM 10 C CAN F0U . . . W 4 297.869 254.235 340.442 1 81.65 ? CAN F0U 5101 C 1 HETATM 11 C CAO F0U . . . W 4 296.425 253.996 340.689 1 81.65 ? CAO F0U 5101 C 1 HETATM 12 C CAP F0U . . . W 4 295.63 254.451 341.773 1 81.65 ? CAP F0U 5101 C 1 HETATM 13 C CAQ F0U . . . W 4 294.398 253.902 341.524 1 81.65 ? CAQ F0U 5101 C 1 HETATM 14 C CAU F0U . . . W 4 295.925 252.52 338.801 1 81.65 ? CAU F0U 5101 C 1 HETATM 15 C CAV F0U . . . W 4 296.447 251.223 339.039 1 81.65 ? CAV F0U 5101 C 1 HETATM 16 C CAX F0U . . . W 4 296.742 250.378 337.969 1 81.65 ? CAX F0U 5101 C 1 HETATM 17 C CAY F0U . . . W 4 296.495 250.848 336.674 1 81.65 ? CAY F0U 5101 C 1 HETATM 18 C CAZ F0U . . . W 4 295.999 252.142 336.505 1 81.65 ? CAZ F0U 5101 C 1 HETATM 19 N NAI F0U . . . W 4 298.894 257.459 340.252 1 81.65 ? NAI F0U 5101 C 1 HETATM 20 N NAM F0U . . . W 4 298.512 254.885 341.46 1 81.65 ? NAM F0U 5101 C 1 HETATM 21 N NAS F0U . . . W 4 294.29 253.181 340.456 1 81.65 ? NAS F0U 5101 C 1 HETATM 22 N NAT F0U . . . W 4 295.551 253.246 339.929 1 81.65 ? NAT F0U 5101 C 1 HETATM 23 N NBA F0U . . . W 4 295.721 252.959 337.539 1 81.65 ? NBA F0U 5101 C 1 HETATM 24 O OAK F0U . . . W 4 300.635 257.11 338.86 1 81.65 ? OAK F0U 5101 C 1 HETATM 25 O OBB F0U . . . W 4 298.461 253.865 339.444 1 81.65 ? OBB F0U 5101 C 1 HETATM 26 BR BR F0U . . . W 4 292.891 254.059 342.604 1 81.65 ? BR F0U 5101 C 1 HETATM 27 CL CL1 F0U . . . W 4 304.423 255.007 342.074 1 81.65 ? CL1 F0U 5101 C 1 HETATM 28 CL CL2 F0U . . . W 4 296.698 250.621 340.659 1 81.65 ? CL2 F0U 5101 C 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 383 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 28 #