data_8Y45
#
_model_server_result.job_id            zXK2T4Ct9nGLmNe20rXslg 
_model_server_result.datetime_utc      '2024-12-27 00:07:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8y45 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8Y45 
#
_exptl.entry_id    8Y45 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              392.491 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "~{N},~{N}-diethyl-4-(5-oxidanylspiro[chromene-2,4'-piperidine]-4-yl)benzamide" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8Y45 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8Y45 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 94 A CYS 121 1_555 A SG CYS 171 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf2 D SG CYS 159 S CYS 159 1_555 D SG CYS 229 S CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
#
_chem_comp.formula           'C24 H28 N2 O3' 
_chem_comp.formula_weight    392.491 
_chem_comp.id                A1LXY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "~{N},~{N}-diethyl-4-(5-oxidanylspiro[chromene-2,4'-piperidine]-4-yl)benzamide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N22 C21 A1LXY sing 1 n n 
N22 C23 A1LXY sing 2 n n 
C21 C20 A1LXY sing 3 n n 
C23 C24 A1LXY sing 4 n n 
C20 C11 A1LXY sing 5 n n 
C24 C11 A1LXY sing 6 n n 
C11 O12 A1LXY sing 7 n n 
C11 C10 A1LXY sing 8 n n 
O12 C13 A1LXY sing 9 n n 
C19 C13 A1LXY doub 10 n y 
C19 C18 A1LXY sing 11 n y 
C13 C14 A1LXY sing 12 n y 
C18 C17 A1LXY doub 13 n y 
C10 C09 A1LXY doub 14 n n 
C14 C09 A1LXY sing 15 n n 
C14 C15 A1LXY doub 16 n y 
C09 C08 A1LXY sing 17 n n 
C17 C15 A1LXY sing 18 n y 
C15 O16 A1LXY sing 19 n n 
C08 C25 A1LXY doub 20 n y 
C08 C07 A1LXY sing 21 n y 
C25 C26 A1LXY sing 22 n y 
C07 C06 A1LXY doub 23 n y 
C26 C05 A1LXY doub 24 n y 
C06 C05 A1LXY sing 25 n y 
C05 C04 A1LXY sing 26 n n 
C04 O27 A1LXY doub 27 n n 
C04 N03 A1LXY sing 28 n n 
C28 N03 A1LXY sing 29 n n 
C28 C29 A1LXY sing 30 n n 
N03 C02 A1LXY sing 31 n n 
C02 C01 A1LXY sing 32 n n 
C10 H1 A1LXY sing 33 n n 
C01 H2 A1LXY sing 34 n n 
C01 H3 A1LXY sing 35 n n 
C01 H4 A1LXY sing 36 n n 
C02 H5 A1LXY sing 37 n n 
C02 H6 A1LXY sing 38 n n 
C06 H7 A1LXY sing 39 n n 
C07 H8 A1LXY sing 40 n n 
C17 H9 A1LXY sing 41 n n 
C18 H10 A1LXY sing 42 n n 
C19 H11 A1LXY sing 43 n n 
C20 H12 A1LXY sing 44 n n 
C20 H13 A1LXY sing 45 n n 
C21 H14 A1LXY sing 46 n n 
C21 H15 A1LXY sing 47 n n 
C23 H16 A1LXY sing 48 n n 
C23 H17 A1LXY sing 49 n n 
C24 H18 A1LXY sing 50 n n 
C24 H19 A1LXY sing 51 n n 
C25 H20 A1LXY sing 52 n n 
C26 H21 A1LXY sing 53 n n 
C28 H22 A1LXY sing 54 n n 
C28 H23 A1LXY sing 55 n n 
C29 H24 A1LXY sing 56 n n 
C29 H25 A1LXY sing 57 n n 
C29 H26 A1LXY sing 58 n n 
N22 H27 A1LXY sing 59 n n 
O16 H29 A1LXY sing 60 n n 
#
_atom_sites.entry_id                     8Y45 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           A1LXY 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      401 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       A1LXY 
_pdbx_nonpoly_scheme.auth_mon_id      ADL 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 A1LXY . . . F 6 113.098 116.763 136.807 1 20 ? C10 A1LXY 401 A 1 
HETATM 2 C C11 A1LXY . . . F 6 112.734 116.552 135.372 1 20 ? C11 A1LXY 401 A 1 
HETATM 3 C C13 A1LXY . . . F 6 110.699 115.564 136.212 1 20 ? C13 A1LXY 401 A 1 
HETATM 4 C C14 A1LXY . . . F 6 110.778 116.302 137.39 1 20 ? C14 A1LXY 401 A 1 
HETATM 5 C C15 A1LXY . . . F 6 109.588 116.369 138.245 1 20 ? C15 A1LXY 401 A 1 
HETATM 6 C C01 A1LXY . . . F 6 110.331 119.193 146.426 1 20 ? C01 A1LXY 401 A 1 
HETATM 7 C C02 A1LXY . . . F 6 111.592 119.48 145.574 1 20 ? C02 A1LXY 401 A 1 
HETATM 8 C C04 A1LXY . . . F 6 112.584 119.122 143.2 1 20 ? C04 A1LXY 401 A 1 
HETATM 9 C C05 A1LXY . . . F 6 112.481 118.554 141.782 1 20 ? C05 A1LXY 401 A 1 
HETATM 10 C C06 A1LXY . . . F 6 112.543 117.18 141.493 1 20 ? C06 A1LXY 401 A 1 
HETATM 11 C C07 A1LXY . . . F 6 112.42 116.697 140.172 1 20 ? C07 A1LXY 401 A 1 
HETATM 12 C C08 A1LXY . . . F 6 112.234 117.545 139.074 1 20 ? C08 A1LXY 401 A 1 
HETATM 13 C C09 A1LXY . . . F 6 112.056 116.976 137.719 1 20 ? C09 A1LXY 401 A 1 
HETATM 14 C C17 A1LXY . . . F 6 108.382 115.73 137.931 1 20 ? C17 A1LXY 401 A 1 
HETATM 15 C C18 A1LXY . . . F 6 108.32 114.99 136.748 1 20 ? C18 A1LXY 401 A 1 
HETATM 16 C C19 A1LXY . . . F 6 109.443 114.901 135.896 1 20 ? C19 A1LXY 401 A 1 
HETATM 17 C C20 A1LXY . . . F 6 111.908 117.322 134.343 1 20 ? C20 A1LXY 401 A 1 
HETATM 18 C C21 A1LXY . . . F 6 112.09 116.849 132.907 1 20 ? C21 A1LXY 401 A 1 
HETATM 19 C C23 A1LXY . . . F 6 114.379 116.438 133.349 1 20 ? C23 A1LXY 401 A 1 
HETATM 20 C C24 A1LXY . . . F 6 114.215 116.682 134.822 1 20 ? C24 A1LXY 401 A 1 
HETATM 21 C C25 A1LXY . . . F 6 112.131 118.906 139.376 1 20 ? C25 A1LXY 401 A 1 
HETATM 22 C C26 A1LXY . . . F 6 112.258 119.404 140.701 1 20 ? C26 A1LXY 401 A 1 
HETATM 23 C C28 A1LXY . . . F 6 110.31 118.181 143.837 1 20 ? C28 A1LXY 401 A 1 
HETATM 24 C C29 A1LXY . . . F 6 109.387 118.898 142.81 1 20 ? C29 A1LXY 401 A 1 
HETATM 25 N N03 A1LXY . . . F 6 111.529 118.935 144.198 1 20 ? N03 A1LXY 401 A 1 
HETATM 26 N N22 A1LXY . . . F 6 113.161 115.896 132.78 1 20 ? N22 A1LXY 401 A 1 
HETATM 27 O O12 A1LXY . . . F 6 111.793 115.477 135.384 1 20 ? O12 A1LXY 401 A 1 
HETATM 28 O O16 A1LXY . . . F 6 109.625 117.091 139.402 1 20 ? O16 A1LXY 401 A 1 
HETATM 29 O O27 A1LXY . . . F 6 113.586 119.773 143.516 1 20 ? O27 A1LXY 401 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           29 
#