data_8Y66 # _model_server_result.job_id in1z8W1_Winsw4cMgWc4JQ _model_server_result.datetime_utc '2025-01-06 22:04:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8y66 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8Y66 # _exptl.entry_id 8Y66 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 270.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Y66 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Y66 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H10 O5' _chem_comp.formula_weight 270.237 _chem_comp.id AGI _chem_comp.mon_nstd_flag . _chem_comp.name 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Apigenin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAG CAE AGI doub 1 n y CAG CAP AGI sing 2 n y CAE CAM AGI sing 3 n y CAM OAB AGI sing 4 n n CAM CAF AGI doub 5 n y CAF CAH AGI sing 6 n y CAH CAP AGI doub 7 n y CAP CAQ AGI sing 8 n n CAQ OAL AGI sing 9 n n CAQ CAJ AGI doub 10 n n OAL CAS AGI sing 11 n n CAJ CAR AGI sing 12 n n CAR OAA AGI doub 13 n n CAR CAT AGI sing 14 n n CAT CAS AGI doub 15 n y CAT CAO AGI sing 16 n y CAS CAK AGI sing 17 n y CAK CAN AGI doub 18 n y CAN OAC AGI sing 19 n n CAN CAI AGI sing 20 n y CAI CAO AGI doub 21 n y CAO OAD AGI sing 22 n n CAG HAG AGI sing 23 n n CAE HAE AGI sing 24 n n OAB HOAB AGI sing 25 n n CAF HAF AGI sing 26 n n CAH HAH AGI sing 27 n n CAJ HAJ AGI sing 28 n n CAK HAK AGI sing 29 n n OAC HOAC AGI sing 30 n n CAI HAI AGI sing 31 n n OAD HOAD AGI sing 32 n n # _atom_sites.entry_id 8Y66 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id AGI _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 601 _pdbx_nonpoly_scheme.pdb_mon_id AGI _pdbx_nonpoly_scheme.auth_mon_id AGI _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAG AGI . . . B 2 110.895 102.807 100.966 1 110.47 ? CAG AGI 601 A 1 HETATM 2 C CAE AGI . . . B 2 110.261 101.821 100.2 1 110.47 ? CAE AGI 601 A 1 HETATM 3 C CAM AGI . . . B 2 108.872 101.844 100.046 1 110.47 ? CAM AGI 601 A 1 HETATM 4 O OAB AGI . . . B 2 108.217 100.824 99.253 1 110.47 ? OAB AGI 601 A 1 HETATM 5 C CAF AGI . . . B 2 108.122 102.839 100.652 1 110.47 ? CAF AGI 601 A 1 HETATM 6 C CAH AGI . . . B 2 108.756 103.822 101.416 1 110.47 ? CAH AGI 601 A 1 HETATM 7 C CAP AGI . . . B 2 110.149 103.796 101.569 1 110.47 ? CAP AGI 601 A 1 HETATM 8 C CAQ AGI . . . B 2 110.842 104.862 102.4 1 110.47 ? CAQ AGI 601 A 1 HETATM 9 O OAL AGI . . . B 2 110.276 106.207 102.471 1 110.47 ? OAL AGI 601 A 1 HETATM 10 C CAJ AGI . . . B 2 112.202 104.603 102.936 1 110.47 ? CAJ AGI 601 A 1 HETATM 11 C CAR AGI . . . B 2 112.903 105.656 103.655 1 110.47 ? CAR AGI 601 A 1 HETATM 12 O OAA AGI . . . B 2 113.998 105.438 104.14 1 110.47 ? OAA AGI 601 A 1 HETATM 13 C CAT AGI . . . B 2 112.261 107.031 103.796 1 110.47 ? CAT AGI 601 A 1 HETATM 14 C CAS AGI . . . B 2 110.991 107.284 103.22 1 110.47 ? CAS AGI 601 A 1 HETATM 15 C CAK AGI . . . B 2 110.394 108.56 103.349 1 110.47 ? CAK AGI 601 A 1 HETATM 16 C CAN AGI . . . B 2 111.055 109.569 104.043 1 110.47 ? CAN AGI 601 A 1 HETATM 17 O OAC AGI . . . B 2 110.464 110.825 104.167 1 110.47 ? OAC AGI 601 A 1 HETATM 18 C CAI AGI . . . B 2 112.326 109.321 104.622 1 110.47 ? CAI AGI 601 A 1 HETATM 19 C CAO AGI . . . B 2 112.925 108.05 104.495 1 110.47 ? CAO AGI 601 A 1 HETATM 20 O OAD AGI . . . B 2 114.23 107.793 105.088 1 110.47 ? OAD AGI 601 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 20 #