data_8YHQ
#
_model_server_result.job_id            GdZjfROBwWQTkAbzIx9w3w 
_model_server_result.datetime_utc      '2024-12-26 12:56:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8yhq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"JA","auth_seq_id":406}' 
#
_entry.id    8YHQ 
#
_exptl.entry_id    8YHQ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              387.817 
_entity.id                          17 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'methyl ~{N}-[2-[[1-(4-chlorophenyl)pyrazol-3-yl]oxymethyl]phenyl]-~{N}-methoxy-carbamate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8YHQ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8YHQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    eicosameric 
_pdbx_struct_assembly.oligomeric_count      20 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 17 BA N N 
? 17 JA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 129 E CYS 159 1_555 E SG CYS 134 E CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? 
disulf ? disulf2 E SG CYS 148 E CYS 178 1_555 E SG CYS 150 E CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? 
disulf ? disulf3 F SG CYS 29 F CYS 101 1_555 F SG CYS 51 F CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? 
disulf ? disulf4 N SG CYS 134 N CYS 164 1_555 N SG CYS 150 N CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
disulf ? disulf5 P SG CYS 29 O CYS 101 1_555 P SG CYS 51 O CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? 
metalc ? metalc1 B NE2 HIS 82 C HIS 82 1_555 W FE HEM . C HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? 
metalc ? metalc2 B NE2 HIS 96 C HIS 96 1_555 X FE HEM . C HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? 
metalc ? metalc3 B NE2 HIS 183 C HIS 183 1_555 W FE HEM . C HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc4 B NE2 HIS 197 C HIS 197 1_555 X FE HEM . C HEM 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? 
metalc ? metalc5 D NE2 HIS 44 D HIS 105 1_555 CA FE HEM . D HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
metalc ? metalc6 G NE2 HIS 82 L HIS 82 1_555 GA FE HEM . L HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? 
metalc ? metalc7 G NE2 HIS 96 L HIS 96 1_555 IA FE HEM . L HEM 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? 
metalc ? metalc8 G NE2 HIS 183 L HIS 183 1_555 GA FE HEM . L HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? 
metalc ? metalc9 G NE2 HIS 197 L HIS 197 1_555 IA FE HEM . L HEM 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? 
metalc ? metalc10 M NE2 HIS 44 M HIS 105 1_555 KA FE HEM . M HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? 
#
_chem_comp.formula           'C19 H18 Cl N3 O4' 
_chem_comp.formula_weight    387.817 
_chem_comp.id                A1D6K 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'methyl ~{N}-[2-[[1-(4-chlorophenyl)pyrazol-3-yl]oxymethyl]phenyl]-~{N}-methoxy-carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Pyraclostrobin 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C5 C6 A1D6K doub 414 n y 
C5 C4 A1D6K sing 415 n y 
C6 C7 A1D6K sing 416 n y 
C4 C3 A1D6K doub 417 n y 
C19 O4 A1D6K sing 418 n n 
C7 C8 A1D6K doub 419 n y 
C3 C8 A1D6K sing 420 n y 
C3 N1 A1D6K sing 421 n n 
C8 C9 A1D6K sing 422 n n 
O4 N1 A1D6K sing 423 n n 
N1 C2 A1D6K sing 424 n n 
C2 O2 A1D6K doub 425 n n 
C2 O1 A1D6K sing 426 n n 
C9 O3 A1D6K sing 427 n n 
O1 C1 A1D6K sing 428 n n 
O3 C10 A1D6K sing 429 n n 
C10 N2 A1D6K doub 430 n y 
C10 C12 A1D6K sing 431 n y 
N2 N3 A1D6K sing 432 n y 
C12 C11 A1D6K doub 433 n y 
N3 C11 A1D6K sing 434 n y 
N3 C13 A1D6K sing 435 n n 
C18 C13 A1D6K doub 436 n y 
C18 C17 A1D6K sing 437 n y 
C13 C14 A1D6K sing 438 n y 
C17 C16 A1D6K doub 439 n y 
C14 C15 A1D6K doub 440 n y 
C16 C15 A1D6K sing 441 n y 
C16 CL1 A1D6K sing 442 n n 
C4 H1 A1D6K sing 443 n n 
C5 H2 A1D6K sing 444 n n 
C6 H3 A1D6K sing 445 n n 
C7 H4 A1D6K sing 446 n n 
C15 H5 A1D6K sing 447 n n 
C17 H6 A1D6K sing 448 n n 
C1 H7 A1D6K sing 449 n n 
C1 H8 A1D6K sing 450 n n 
C1 H9 A1D6K sing 451 n n 
C11 H10 A1D6K sing 452 n n 
C12 H11 A1D6K sing 453 n n 
C14 H12 A1D6K sing 454 n n 
C18 H13 A1D6K sing 455 n n 
C19 H14 A1D6K sing 456 n n 
C19 H15 A1D6K sing 457 n n 
C19 H16 A1D6K sing 458 n n 
C9 H17 A1D6K sing 459 n n 
C9 H18 A1D6K sing 460 n n 
#
_atom_sites.entry_id                     8YHQ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
U 11 6PH C 1 401 402 6PH 6PH . 
V 12 9PE C 1 402 403 9PE 9PE . 
W 13 HEM C 1 403 404 HEM HEM . 
X 13 HEM C 1 404 405 HEM HEM . 
Y 14 8PE C 1 405 406 8PE 8PE . 
Z 15 CN5 C 1 406 407 CN5 CN5 . 
AA 16 UQ6 C 1 407 408 UQ6 UQ6 . 
BA 17 A1D6K C 1 408 401 A1D6K A1D . 
CA 13 HEM D 1 401 402 HEM HEM . 
DA 18 7PH D 1 402 401 7PH 7PH . 
EA 16 UQ6 L 1 401 402 UQ6 UQ6 . 
FA 12 9PE L 1 402 403 9PE 9PE . 
GA 13 HEM L 1 403 404 HEM HEM . 
HA 19 CN3 L 1 404 405 CN3 CN3 . 
IA 13 HEM L 1 405 406 HEM HEM . 
JA 17 A1D6K L 1 406 401 A1D6K A1D . 
KA 13 HEM M 1 401 401 HEM HEM . 
LA 11 6PH N 1 401 401 6PH 6PH . 
MA 18 7PH N 1 402 402 7PH 7PH . 
NA 14 8PE Q 1 101 101 8PE 8PE . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 A1D6K . . . JA 17 154.94 134.356 102.186 1 17.47 ? N1 A1D6K 406 L 1 
HETATM 2 N N3 A1D6K . . . JA 17 156.708 130.536 106.991 1 17.47 ? N3 A1D6K 406 L 1 
HETATM 3 C C4 A1D6K . . . JA 17 156.494 134.745 100.403 1 17.47 ? C4 A1D6K 406 L 1 
HETATM 4 C C5 A1D6K . . . JA 17 157.793 134.451 99.673 1 17.47 ? C5 A1D6K 406 L 1 
HETATM 5 C C6 A1D6K . . . JA 17 158.612 133.54 100.129 1 17.47 ? C6 A1D6K 406 L 1 
HETATM 6 C C7 A1D6K . . . JA 17 158.262 132.773 101.391 1 17.47 ? C7 A1D6K 406 L 1 
HETATM 7 C C8 A1D6K . . . JA 17 157.14 133.023 102.024 1 17.47 ? C8 A1D6K 406 L 1 
HETATM 8 C C10 A1D6K . . . JA 17 157.607 131.706 105.413 1 17.47 ? C10 A1D6K 406 L 1 
HETATM 9 C C13 A1D6K . . . JA 17 155.687 129.834 107.747 1 17.47 ? C13 A1D6K 406 L 1 
HETATM 10 C C15 A1D6K . . . JA 17 155.061 128.612 109.791 1 17.47 ? C15 A1D6K 406 L 1 
HETATM 11 C C17 A1D6K . . . JA 17 153.391 128.991 108.038 1 17.47 ? C17 A1D6K 406 L 1 
HETATM 12 C C1 A1D6K . . . JA 17 153.522 136.805 104.537 1 17.47 ? C1 A1D6K 406 L 1 
HETATM 13 C C11 A1D6K . . . JA 17 157.96 130.612 107.402 1 17.47 ? C11 A1D6K 406 L 1 
HETATM 14 C C12 A1D6K . . . JA 17 158.628 131.347 106.454 1 17.47 ? C12 A1D6K 406 L 1 
HETATM 15 C C14 A1D6K . . . JA 17 155.995 129.238 109.113 1 17.47 ? C14 A1D6K 406 L 1 
HETATM 16 C C16 A1D6K . . . JA 17 153.659 128.477 109.214 1 17.47 ? C16 A1D6K 406 L 1 
HETATM 17 C C18 A1D6K . . . JA 17 154.478 129.718 107.256 1 17.47 ? C18 A1D6K 406 L 1 
HETATM 18 C C19 A1D6K . . . JA 17 153.162 133.532 100.861 1 17.47 ? C19 A1D6K 406 L 1 
HETATM 19 C C2 A1D6K . . . JA 17 154.797 135.516 103.04 1 17.47 ? C2 A1D6K 406 L 1 
HETATM 20 C C3 A1D6K . . . JA 17 156.186 134.087 101.494 1 17.47 ? C3 A1D6K 406 L 1 
HETATM 21 C C9 A1D6K . . . JA 17 156.812 132.246 103.29 1 17.47 ? C9 A1D6K 406 L 1 
HETATM 22 N N2 A1D6K . . . JA 17 156.409 131.142 105.85 1 17.47 ? N2 A1D6K 406 L 1 
HETATM 23 O O1 A1D6K . . . JA 17 153.533 135.84 103.531 1 17.47 ? O1 A1D6K 406 L 1 
HETATM 24 O O2 A1D6K . . . JA 17 155.738 136.169 103.317 1 17.47 ? O2 A1D6K 406 L 1 
HETATM 25 O O3 A1D6K . . . JA 17 157.802 132.455 104.25 1 17.47 ? O3 A1D6K 406 L 1 
HETATM 26 O O4 A1D6K . . . JA 17 153.866 133.452 102.067 1 17.47 ? O4 A1D6K 406 L 1 
HETATM 27 CL CL1 A1D6K . . . JA 17 152.386 127.627 110.13 1 17.47 ? CL1 A1D6K 406 L 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#