data_8YHR # _model_server_result.job_id J-WUk4mpHoJtTqXRle85Dg _model_server_result.datetime_utc '2025-01-10 10:06:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8yhr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":410}' # _entry.id 8YHR # _exptl.entry_id 8YHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8YHR _cell.length_a 90.627 _cell.length_b 90.627 _cell.length_c 122.181 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8YHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 52 n n C OXT ACT sing 53 n n C CH3 ACT sing 54 n n CH3 H1 ACT sing 55 n n CH3 H2 ACT sing 56 n n CH3 H3 ACT sing 57 n n # _atom_sites.entry_id 8YHR _atom_sites.fract_transf_matrix[1][1] 0.011034 _atom_sites.fract_transf_matrix[1][2] 0.006371 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012741 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008185 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ORO A 1 401 1 ORO ORO . C 3 FMN A 1 402 1 FMN FMN . D 4 GOL A 1 403 1 GOL GOL . E 4 GOL A 1 404 3 GOL GOL . F 4 GOL A 1 405 4 GOL GOL . G 5 ACT A 1 406 1 ACT ACT . H 5 ACT A 1 407 2 ACT ACT . I 5 ACT A 1 408 3 ACT ACT . J 5 ACT A 1 409 5 ACT ACT . K 5 ACT A 1 410 6 ACT ACT . L 6 SO4 A 1 411 1 SO4 SO4 . M 7 A1LYU A 1 412 1 A1LYU LIG . N 8 HOH A 1 501 308 HOH HOH . N 8 HOH A 2 502 123 HOH HOH . N 8 HOH A 3 503 276 HOH HOH . N 8 HOH A 4 504 277 HOH HOH . N 8 HOH A 5 505 147 HOH HOH . N 8 HOH A 6 506 186 HOH HOH . N 8 HOH A 7 507 139 HOH HOH . N 8 HOH A 8 508 108 HOH HOH . N 8 HOH A 9 509 155 HOH HOH . N 8 HOH A 10 510 290 HOH HOH . N 8 HOH A 11 511 48 HOH HOH . N 8 HOH A 12 512 79 HOH HOH . N 8 HOH A 13 513 237 HOH HOH . N 8 HOH A 14 514 52 HOH HOH . N 8 HOH A 15 515 285 HOH HOH . N 8 HOH A 16 516 83 HOH HOH . N 8 HOH A 17 517 263 HOH HOH . N 8 HOH A 18 518 1 HOH HOH . N 8 HOH A 19 519 151 HOH HOH . N 8 HOH A 20 520 88 HOH HOH . N 8 HOH A 21 521 133 HOH HOH . N 8 HOH A 22 522 80 HOH HOH . N 8 HOH A 23 523 103 HOH HOH . N 8 HOH A 24 524 100 HOH HOH . N 8 HOH A 25 525 47 HOH HOH . N 8 HOH A 26 526 157 HOH HOH . N 8 HOH A 27 527 160 HOH HOH . N 8 HOH A 28 528 86 HOH HOH . N 8 HOH A 29 529 213 HOH HOH . N 8 HOH A 30 530 146 HOH HOH . N 8 HOH A 31 531 104 HOH HOH . N 8 HOH A 32 532 143 HOH HOH . N 8 HOH A 33 533 96 HOH HOH . N 8 HOH A 34 534 182 HOH HOH . N 8 HOH A 35 535 110 HOH HOH . N 8 HOH A 36 536 24 HOH HOH . N 8 HOH A 37 537 208 HOH HOH . N 8 HOH A 38 538 154 HOH HOH . N 8 HOH A 39 539 91 HOH HOH . N 8 HOH A 40 540 196 HOH HOH . N 8 HOH A 41 541 271 HOH HOH . N 8 HOH A 42 542 138 HOH HOH . N 8 HOH A 43 543 75 HOH HOH . N 8 HOH A 44 544 2 HOH HOH . N 8 HOH A 45 545 6 HOH HOH . N 8 HOH A 46 546 9 HOH HOH . N 8 HOH A 47 547 19 HOH HOH . N 8 HOH A 48 548 113 HOH HOH . N 8 HOH A 49 549 111 HOH HOH . N 8 HOH A 50 550 137 HOH HOH . N 8 HOH A 51 551 38 HOH HOH . N 8 HOH A 52 552 12 HOH HOH . N 8 HOH A 53 553 165 HOH HOH . N 8 HOH A 54 554 62 HOH HOH . N 8 HOH A 55 555 192 HOH HOH . N 8 HOH A 56 556 135 HOH HOH . N 8 HOH A 57 557 150 HOH HOH . N 8 HOH A 58 558 85 HOH HOH . N 8 HOH A 59 559 281 HOH HOH . N 8 HOH A 60 560 122 HOH HOH . N 8 HOH A 61 561 280 HOH HOH . N 8 HOH A 62 562 84 HOH HOH . N 8 HOH A 63 563 31 HOH HOH . N 8 HOH A 64 564 136 HOH HOH . N 8 HOH A 65 565 10 HOH HOH . N 8 HOH A 66 566 61 HOH HOH . N 8 HOH A 67 567 132 HOH HOH . N 8 HOH A 68 568 69 HOH HOH . N 8 HOH A 69 569 11 HOH HOH . N 8 HOH A 70 570 14 HOH HOH . N 8 HOH A 71 571 118 HOH HOH . N 8 HOH A 72 572 105 HOH HOH . N 8 HOH A 73 573 33 HOH HOH . N 8 HOH A 74 574 90 HOH HOH . N 8 HOH A 75 575 22 HOH HOH . N 8 HOH A 76 576 183 HOH HOH . N 8 HOH A 77 577 3 HOH HOH . N 8 HOH A 78 578 112 HOH HOH . N 8 HOH A 79 579 58 HOH HOH . N 8 HOH A 80 580 21 HOH HOH . N 8 HOH A 81 581 37 HOH HOH . N 8 HOH A 82 582 259 HOH HOH . N 8 HOH A 83 583 102 HOH HOH . N 8 HOH A 84 584 130 HOH HOH . N 8 HOH A 85 585 60 HOH HOH . N 8 HOH A 86 586 67 HOH HOH . N 8 HOH A 87 587 36 HOH HOH . N 8 HOH A 88 588 175 HOH HOH . N 8 HOH A 89 589 57 HOH HOH . N 8 HOH A 90 590 163 HOH HOH . N 8 HOH A 91 591 81 HOH HOH . N 8 HOH A 92 592 191 HOH HOH . N 8 HOH A 93 593 20 HOH HOH . N 8 HOH A 94 594 190 HOH HOH . N 8 HOH A 95 595 197 HOH HOH . N 8 HOH A 96 596 162 HOH HOH . N 8 HOH A 97 597 43 HOH HOH . N 8 HOH A 98 598 177 HOH HOH . N 8 HOH A 99 599 305 HOH HOH . N 8 HOH A 100 600 275 HOH HOH . N 8 HOH A 101 601 53 HOH HOH . N 8 HOH A 102 602 56 HOH HOH . N 8 HOH A 103 603 152 HOH HOH . N 8 HOH A 104 604 258 HOH HOH . N 8 HOH A 105 605 94 HOH HOH . N 8 HOH A 106 606 13 HOH HOH . N 8 HOH A 107 607 131 HOH HOH . N 8 HOH A 108 608 68 HOH HOH . N 8 HOH A 109 609 239 HOH HOH . N 8 HOH A 110 610 206 HOH HOH . N 8 HOH A 111 611 77 HOH HOH . N 8 HOH A 112 612 18 HOH HOH . N 8 HOH A 113 613 168 HOH HOH . N 8 HOH A 114 614 28 HOH HOH . N 8 HOH A 115 615 199 HOH HOH . N 8 HOH A 116 616 16 HOH HOH . N 8 HOH A 117 617 201 HOH HOH . N 8 HOH A 118 618 216 HOH HOH . N 8 HOH A 119 619 51 HOH HOH . N 8 HOH A 120 620 170 HOH HOH . N 8 HOH A 121 621 71 HOH HOH . N 8 HOH A 122 622 40 HOH HOH . N 8 HOH A 123 623 87 HOH HOH . N 8 HOH A 124 624 49 HOH HOH . N 8 HOH A 125 625 109 HOH HOH . N 8 HOH A 126 626 214 HOH HOH . N 8 HOH A 127 627 306 HOH HOH . N 8 HOH A 128 628 63 HOH HOH . N 8 HOH A 129 629 72 HOH HOH . N 8 HOH A 130 630 144 HOH HOH . N 8 HOH A 131 631 39 HOH HOH . N 8 HOH A 132 632 125 HOH HOH . N 8 HOH A 133 633 172 HOH HOH . N 8 HOH A 134 634 29 HOH HOH . N 8 HOH A 135 635 7 HOH HOH . N 8 HOH A 136 636 148 HOH HOH . N 8 HOH A 137 637 50 HOH HOH . N 8 HOH A 138 638 252 HOH HOH . N 8 HOH A 139 639 97 HOH HOH . N 8 HOH A 140 640 32 HOH HOH . N 8 HOH A 141 641 8 HOH HOH . N 8 HOH A 142 642 217 HOH HOH . N 8 HOH A 143 643 59 HOH HOH . N 8 HOH A 144 644 158 HOH HOH . N 8 HOH A 145 645 42 HOH HOH . N 8 HOH A 146 646 167 HOH HOH . N 8 HOH A 147 647 230 HOH HOH . N 8 HOH A 148 648 194 HOH HOH . N 8 HOH A 149 649 65 HOH HOH . N 8 HOH A 150 650 44 HOH HOH . N 8 HOH A 151 651 93 HOH HOH . N 8 HOH A 152 652 211 HOH HOH . N 8 HOH A 153 653 34 HOH HOH . N 8 HOH A 154 654 64 HOH HOH . N 8 HOH A 155 655 23 HOH HOH . N 8 HOH A 156 656 231 HOH HOH . N 8 HOH A 157 657 25 HOH HOH . N 8 HOH A 158 658 26 HOH HOH . N 8 HOH A 159 659 82 HOH HOH . N 8 HOH A 160 660 73 HOH HOH . N 8 HOH A 161 661 101 HOH HOH . N 8 HOH A 162 662 289 HOH HOH . N 8 HOH A 163 663 126 HOH HOH . N 8 HOH A 164 664 225 HOH HOH . N 8 HOH A 165 665 15 HOH HOH . N 8 HOH A 166 666 35 HOH HOH . N 8 HOH A 167 667 70 HOH HOH . N 8 HOH A 168 668 30 HOH HOH . N 8 HOH A 169 669 256 HOH HOH . N 8 HOH A 170 670 4 HOH HOH . N 8 HOH A 171 671 17 HOH HOH . N 8 HOH A 172 672 98 HOH HOH . N 8 HOH A 173 673 121 HOH HOH . N 8 HOH A 174 674 128 HOH HOH . N 8 HOH A 175 675 76 HOH HOH . N 8 HOH A 176 676 124 HOH HOH . N 8 HOH A 177 677 156 HOH HOH . N 8 HOH A 178 678 41 HOH HOH . N 8 HOH A 179 679 92 HOH HOH . N 8 HOH A 180 680 187 HOH HOH . N 8 HOH A 181 681 159 HOH HOH . N 8 HOH A 182 682 309 HOH HOH . N 8 HOH A 183 683 140 HOH HOH . N 8 HOH A 184 684 5 HOH HOH . N 8 HOH A 185 685 142 HOH HOH . N 8 HOH A 186 686 307 HOH HOH . N 8 HOH A 187 687 169 HOH HOH . N 8 HOH A 188 688 270 HOH HOH . N 8 HOH A 189 689 204 HOH HOH . N 8 HOH A 190 690 173 HOH HOH . N 8 HOH A 191 691 210 HOH HOH . N 8 HOH A 192 692 198 HOH HOH . N 8 HOH A 193 693 283 HOH HOH . N 8 HOH A 194 694 266 HOH HOH . N 8 HOH A 195 695 45 HOH HOH . N 8 HOH A 196 696 114 HOH HOH . N 8 HOH A 197 697 55 HOH HOH . N 8 HOH A 198 698 95 HOH HOH . N 8 HOH A 199 699 268 HOH HOH . N 8 HOH A 200 700 189 HOH HOH . N 8 HOH A 201 701 242 HOH HOH . N 8 HOH A 202 702 299 HOH HOH . N 8 HOH A 203 703 106 HOH HOH . N 8 HOH A 204 704 134 HOH HOH . N 8 HOH A 205 705 253 HOH HOH . N 8 HOH A 206 706 99 HOH HOH . N 8 HOH A 207 707 27 HOH HOH . N 8 HOH A 208 708 260 HOH HOH . N 8 HOH A 209 709 226 HOH HOH . N 8 HOH A 210 710 254 HOH HOH . N 8 HOH A 211 711 66 HOH HOH . N 8 HOH A 212 712 54 HOH HOH . N 8 HOH A 213 713 297 HOH HOH . N 8 HOH A 214 714 164 HOH HOH . N 8 HOH A 215 715 221 HOH HOH . N 8 HOH A 216 716 235 HOH HOH . N 8 HOH A 217 717 264 HOH HOH . N 8 HOH A 218 718 78 HOH HOH . N 8 HOH A 219 719 272 HOH HOH . N 8 HOH A 220 720 234 HOH HOH . N 8 HOH A 221 721 262 HOH HOH . N 8 HOH A 222 722 107 HOH HOH . N 8 HOH A 223 723 115 HOH HOH . N 8 HOH A 224 724 229 HOH HOH . N 8 HOH A 225 725 166 HOH HOH . N 8 HOH A 226 726 274 HOH HOH . N 8 HOH A 227 727 212 HOH HOH . N 8 HOH A 228 728 220 HOH HOH . N 8 HOH A 229 729 293 HOH HOH . N 8 HOH A 230 730 119 HOH HOH . N 8 HOH A 231 731 184 HOH HOH . N 8 HOH A 232 732 222 HOH HOH . N 8 HOH A 233 733 193 HOH HOH . N 8 HOH A 234 734 243 HOH HOH . N 8 HOH A 235 735 284 HOH HOH . N 8 HOH A 236 736 178 HOH HOH . N 8 HOH A 237 737 273 HOH HOH . N 8 HOH A 238 738 233 HOH HOH . N 8 HOH A 239 739 209 HOH HOH . N 8 HOH A 240 740 176 HOH HOH . N 8 HOH A 241 741 180 HOH HOH . N 8 HOH A 242 742 219 HOH HOH . N 8 HOH A 243 743 205 HOH HOH . N 8 HOH A 244 744 153 HOH HOH . N 8 HOH A 245 745 181 HOH HOH . N 8 HOH A 246 746 294 HOH HOH . N 8 HOH A 247 747 161 HOH HOH . N 8 HOH A 248 748 202 HOH HOH . N 8 HOH A 249 749 195 HOH HOH . N 8 HOH A 250 750 282 HOH HOH . N 8 HOH A 251 751 215 HOH HOH . N 8 HOH A 252 752 257 HOH HOH . N 8 HOH A 253 753 245 HOH HOH . N 8 HOH A 254 754 232 HOH HOH . N 8 HOH A 255 755 74 HOH HOH . N 8 HOH A 256 756 149 HOH HOH . N 8 HOH A 257 757 117 HOH HOH . N 8 HOH A 258 758 89 HOH HOH . N 8 HOH A 259 759 171 HOH HOH . N 8 HOH A 260 760 188 HOH HOH . N 8 HOH A 261 761 179 HOH HOH . N 8 HOH A 262 762 295 HOH HOH . N 8 HOH A 263 763 218 HOH HOH . N 8 HOH A 264 764 296 HOH HOH . N 8 HOH A 265 765 145 HOH HOH . N 8 HOH A 266 766 244 HOH HOH . N 8 HOH A 267 767 265 HOH HOH . N 8 HOH A 268 768 203 HOH HOH . N 8 HOH A 269 769 116 HOH HOH . N 8 HOH A 270 770 238 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . K 5 6.872 78.527 133.635 1 48.49 ? C ACT 410 A 1 HETATM 2 O O ACT . . . K 5 7.418 79.371 132.877 1 60.24 ? O ACT 410 A 1 HETATM 3 O OXT ACT . . . K 5 5.669 78.21 133.457 1 40.5 ? OXT ACT 410 A 1 HETATM 4 C CH3 ACT . . . K 5 7.661 77.889 134.757 1 51.27 ? CH3 ACT 410 A 1 HETATM 5 H H1 ACT . . . K 5 8.602 77.836 134.503 1 61.52 ? H1 ACT 410 A 1 HETATM 6 H H2 ACT . . . K 5 7.319 76.991 134.925 1 61.52 ? H2 ACT 410 A 1 HETATM 7 H H3 ACT . . . K 5 7.572 78.428 135.565 1 61.52 ? H3 ACT 410 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 7 #