data_8YM7
#
_model_server_result.job_id            NH04mvcz27vw_mqr2bHhHQ 
_model_server_result.datetime_utc      '2024-10-10 17:12:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ym7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":902}' 
#
_entry.id    8YM7 
#
_exptl.entry_id    8YM7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              438.499 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[5-(4-azanylpiperidin-1-yl)-8-(4-methylphenyl)pyrido[3,4-b]pyrazin-7-yl]-2-fluoranyl-benzenecarbonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8YM7 
_cell.length_a            120.674 
_cell.length_b            178.038 
_cell.length_c            234.346 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8YM7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C26 H23 F N6' 
_chem_comp.formula_weight    438.499 
_chem_comp.id                A1LZJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[5-(4-azanylpiperidin-1-yl)-8-(4-methylphenyl)pyrido[3,4-b]pyrazin-7-yl]-2-fluoranyl-benzenecarbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C02 A1LZJ sing 1 n n 
N15 C14 A1LZJ trip 2 n n 
C03 C02 A1LZJ doub 3 n y 
C03 C04 A1LZJ sing 4 n y 
C14 C13 A1LZJ sing 5 n n 
C02 C05 A1LZJ sing 6 n y 
C04 C07 A1LZJ doub 7 n y 
F17 C16 A1LZJ sing 8 n n 
C13 C16 A1LZJ sing 9 n y 
C13 C12 A1LZJ doub 10 n y 
C16 C18 A1LZJ doub 11 n y 
C12 C11 A1LZJ sing 12 n y 
C05 C06 A1LZJ doub 13 n y 
C07 C06 A1LZJ sing 14 n y 
C07 C08 A1LZJ sing 15 n n 
C18 C10 A1LZJ sing 16 n y 
C11 C10 A1LZJ doub 17 n y 
C10 C09 A1LZJ sing 18 n n 
C08 C09 A1LZJ doub 19 n y 
C08 C29 A1LZJ sing 20 n y 
C09 N19 A1LZJ sing 21 n y 
N30 C29 A1LZJ sing 22 n y 
N30 C31 A1LZJ doub 23 n y 
C29 C28 A1LZJ doub 24 n y 
N19 C20 A1LZJ doub 25 n y 
C31 C32 A1LZJ sing 26 n y 
C28 C20 A1LZJ sing 27 n y 
C28 N33 A1LZJ sing 28 n y 
C20 N21 A1LZJ sing 29 n n 
C32 N33 A1LZJ doub 30 n y 
C22 N21 A1LZJ sing 31 n n 
C22 C23 A1LZJ sing 32 n n 
N21 C27 A1LZJ sing 33 n n 
C23 C24 A1LZJ sing 34 n n 
C27 C26 A1LZJ sing 35 n n 
C24 C26 A1LZJ sing 36 n n 
C24 N25 A1LZJ sing 37 n n 
C22 H221 A1LZJ sing 38 n n 
C22 H222 A1LZJ sing 39 n n 
C24 H241 A1LZJ sing 40 n n 
C26 H262 A1LZJ sing 41 n n 
C26 H261 A1LZJ sing 42 n n 
C01 H012 A1LZJ sing 43 n n 
C01 H011 A1LZJ sing 44 n n 
C01 H013 A1LZJ sing 45 n n 
C03 H031 A1LZJ sing 46 n n 
C04 H041 A1LZJ sing 47 n n 
C05 H051 A1LZJ sing 48 n n 
C06 H061 A1LZJ sing 49 n n 
C11 H111 A1LZJ sing 50 n n 
C12 H121 A1LZJ sing 51 n n 
C18 H181 A1LZJ sing 52 n n 
C23 H231 A1LZJ sing 53 n n 
C23 H232 A1LZJ sing 54 n n 
C27 H271 A1LZJ sing 55 n n 
C27 H272 A1LZJ sing 56 n n 
C31 H311 A1LZJ sing 57 n n 
C32 H321 A1LZJ sing 58 n n 
N25 H1 A1LZJ sing 59 n n 
N25 H252 A1LZJ sing 60 n n 
#
_atom_sites.entry_id                     8YM7 
_atom_sites.fract_transf_matrix[1][1]    0.008287 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005617 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FAD A 1 901 901 FAD FAD . 
D 4 A1LZJ A 1 902 902 A1LZJ LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 A1LZJ . . . D 4 -67.326 -35.884 -35.918 1 48.83 ? C10 A1LZJ 902 A 1 
HETATM 2 C C13 A1LZJ . . . D 4 -68.523 -33.997 -37.504 1 48.38 ? C13 A1LZJ 902 A 1 
HETATM 3 C C20 A1LZJ . . . D 4 -65.083 -37.431 -33.404 1 54.76 ? C20 A1LZJ 902 A 1 
HETATM 4 C C22 A1LZJ . . . D 4 -63.509 -35.606 -32.499 1 51.99 ? C22 A1LZJ 902 A 1 
HETATM 5 C C24 A1LZJ . . . D 4 -62.046 -36.178 -30.639 1 50.51 ? C24 A1LZJ 902 A 1 
HETATM 6 C C26 A1LZJ . . . D 4 -62.817 -37.372 -30.367 1 46.51 ? C26 A1LZJ 902 A 1 
HETATM 7 C C28 A1LZJ . . . D 4 -65.283 -38.839 -33.549 1 60.53 ? C28 A1LZJ 902 A 1 
HETATM 8 C C01 A1LZJ . . . D 4 -70.651 -40.103 -39.33 1 65.38 ? C01 A1LZJ 902 A 1 
HETATM 9 C C02 A1LZJ . . . D 4 -69.641 -39.633 -38.291 1 61.44 ? C02 A1LZJ 902 A 1 
HETATM 10 C C03 A1LZJ . . . D 4 -68.429 -39.068 -38.663 1 56.13 ? C03 A1LZJ 902 A 1 
HETATM 11 C C04 A1LZJ . . . D 4 -67.53 -38.656 -37.686 1 52.34 ? C04 A1LZJ 902 A 1 
HETATM 12 C C05 A1LZJ . . . D 4 -69.967 -39.768 -36.951 1 61.32 ? C05 A1LZJ 902 A 1 
HETATM 13 C C06 A1LZJ . . . D 4 -69.07 -39.35 -35.977 1 61.16 ? C06 A1LZJ 902 A 1 
HETATM 14 C C07 A1LZJ . . . D 4 -67.851 -38.797 -36.341 1 55.71 ? C07 A1LZJ 902 A 1 
HETATM 15 C C08 A1LZJ . . . D 4 -66.857 -38.313 -35.284 1 56.63 ? C08 A1LZJ 902 A 1 
HETATM 16 C C09 A1LZJ . . . D 4 -66.62 -36.938 -35.061 1 54.73 ? C09 A1LZJ 902 A 1 
HETATM 17 C C11 A1LZJ . . . D 4 -68.679 -35.974 -36.28 1 50.12 ? C11 A1LZJ 902 A 1 
HETATM 18 C C12 A1LZJ . . . D 4 -69.292 -35.041 -37.096 1 47.99 ? C12 A1LZJ 902 A 1 
HETATM 19 C C14 A1LZJ . . . D 4 -69.044 -32.865 -38.373 1 55.94 ? C14 A1LZJ 902 A 1 
HETATM 20 C C16 A1LZJ . . . D 4 -67.201 -33.908 -37.126 1 53.03 ? C16 A1LZJ 902 A 1 
HETATM 21 C C18 A1LZJ . . . D 4 -66.568 -34.835 -36.339 1 44.86 ? C18 A1LZJ 902 A 1 
HETATM 22 C C23 A1LZJ . . . D 4 -62.078 -35.714 -32.008 1 49.52 ? C23 A1LZJ 902 A 1 
HETATM 23 C C27 A1LZJ . . . D 4 -64.219 -37.348 -30.953 1 48.11 ? C27 A1LZJ 902 A 1 
HETATM 24 C C29 A1LZJ . . . D 4 -66.179 -39.281 -34.493 1 59.41 ? C29 A1LZJ 902 A 1 
HETATM 25 C C31 A1LZJ . . . D 4 -65.728 -41.453 -33.875 1 60.42 ? C31 A1LZJ 902 A 1 
HETATM 26 C C32 A1LZJ . . . D 4 -64.813 -41.016 -32.923 1 58.99 ? C32 A1LZJ 902 A 1 
HETATM 27 F F17 A1LZJ . . . D 4 -66.51 -32.826 -37.573 1 67.22 ? F17 A1LZJ 902 A 1 
HETATM 28 N N15 A1LZJ . . . D 4 -69.355 -31.986 -39.025 1 58.44 ? N15 A1LZJ 902 A 1 
HETATM 29 N N19 A1LZJ . . . D 4 -65.718 -36.544 -34.163 1 55.42 ? N19 A1LZJ 902 A 1 
HETATM 30 N N21 A1LZJ . . . D 4 -64.14 -36.978 -32.417 1 50.82 ? N21 A1LZJ 902 A 1 
HETATM 31 N N25 A1LZJ . . . D 4 -60.664 -36.45 -30.277 1 52.43 ? N25 A1LZJ 902 A 1 
HETATM 32 N N30 A1LZJ . . . D 4 -66.402 -40.616 -34.641 1 51.26 ? N30 A1LZJ 902 A 1 
HETATM 33 N N33 A1LZJ . . . D 4 -64.593 -39.734 -32.774 1 58.79 ? N33 A1LZJ 902 A 1 
HETATM 34 H H221 A1LZJ . . . D 4 -64.061 -34.908 -31.878 1 62.41 ? H221 A1LZJ 902 A 1 
HETATM 35 H H222 A1LZJ . . . D 4 -63.521 -35.255 -33.526 1 62.41 ? H222 A1LZJ 902 A 1 
HETATM 36 H H241 A1LZJ . . . D 4 -62.458 -35.381 -30.031 1 60.63 ? H241 A1LZJ 902 A 1 
HETATM 37 H H262 A1LZJ . . . D 4 -62.287 -38.224 -30.78 1 55.83 ? H262 A1LZJ 902 A 1 
HETATM 38 H H261 A1LZJ . . . D 4 -62.898 -37.49 -29.291 1 55.83 ? H261 A1LZJ 902 A 1 
HETATM 39 H H012 A1LZJ . . . D 4 -70.26 -39.913 -40.326 1 78.47 ? H012 A1LZJ 902 A 1 
HETATM 40 H H011 A1LZJ . . . D 4 -71.584 -39.563 -39.198 1 78.47 ? H011 A1LZJ 902 A 1 
HETATM 41 H H013 A1LZJ . . . D 4 -70.828 -41.168 -39.208 1 78.47 ? H013 A1LZJ 902 A 1 
HETATM 42 H H031 A1LZJ . . . D 4 -68.185 -38.947 -39.711 1 67.38 ? H031 A1LZJ 902 A 1 
HETATM 43 H H041 A1LZJ . . . D 4 -66.578 -38.225 -37.973 1 62.83 ? H041 A1LZJ 902 A 1 
HETATM 44 H H051 A1LZJ . . . D 4 -70.919 -40.197 -36.664 1 73.6 ? H051 A1LZJ 902 A 1 
HETATM 45 H H061 A1LZJ . . . D 4 -69.323 -39.456 -34.929 1 73.41 ? H061 A1LZJ 902 A 1 
HETATM 46 H H111 A1LZJ . . . D 4 -69.264 -36.805 -35.907 1 60.17 ? H111 A1LZJ 902 A 1 
HETATM 47 H H121 A1LZJ . . . D 4 -70.329 -35.137 -37.394 1 57.61 ? H121 A1LZJ 902 A 1 
HETATM 48 H H181 A1LZJ . . . D 4 -65.524 -34.738 -36.068 1 53.85 ? H181 A1LZJ 902 A 1 
HETATM 49 H H231 A1LZJ . . . D 4 -61.604 -34.74 -32.068 1 59.45 ? H231 A1LZJ 902 A 1 
HETATM 50 H H232 A1LZJ . . . D 4 -61.536 -36.413 -32.636 1 59.45 ? H232 A1LZJ 902 A 1 
HETATM 51 H H271 A1LZJ . . . D 4 -64.673 -38.328 -30.85 1 57.75 ? H271 A1LZJ 902 A 1 
HETATM 52 H H272 A1LZJ . . . D 4 -64.823 -36.618 -30.425 1 57.75 ? H272 A1LZJ 902 A 1 
HETATM 53 H H311 A1LZJ . . . D 4 -65.893 -42.518 -33.992 1 72.52 ? H311 A1LZJ 902 A 1 
HETATM 54 H H321 A1LZJ . . . D 4 -64.284 -41.733 -32.307 1 70.8 ? H321 A1LZJ 902 A 1 
HETATM 55 H H252 A1LZJ . A . D 4 -60.083 -35.69 -30.58 0.5 62.93 ? H252 A1LZJ 902 A 1 
HETATM 56 H H252 A1LZJ . B . D 4 -60.593 -36.568 -29.283 0.5 62.93 ? H252 A1LZJ 902 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           56 
#