data_8YRL # _model_server_result.job_id WKGGe1CE6Vv0ViN-EE0GVQ _model_server_result.datetime_utc '2024-11-17 20:46:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8yrl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 8YRL # _exptl.entry_id 8YRL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.161 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "URIDINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8YRL _cell.length_a 84.142 _cell.length_b 188.606 _cell.length_c 71.933 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8YRL _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 35 A CYS 77 1_555 A SG CYS 106 A CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 284 A CYS 326 1_555 A SG CYS 299 A CYS 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 35 B CYS 77 1_555 B SG CYS 106 B CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 284 B CYS 326 1_555 B SG CYS 299 B CYS 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OD2 ASP 218 A ASP 260 1_555 C MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc2 A OD1 ASP 220 A ASP 262 1_555 C MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc3 A NE2 HIS 337 A HIS 379 1_555 C MN MN . A MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc4 C MN MN . A MN 701 1_555 D O3B UDP . A UDP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc5 C MN MN . A MN 701 1_555 D O1A UDP . A UDP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc6 B OD2 ASP 218 B ASP 260 1_555 M MN MN . B MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc7 B OD1 ASP 220 B ASP 262 1_555 M MN MN . B MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc8 B NE2 HIS 337 B HIS 379 1_555 M MN MN . B MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc9 L O2A UDP . B UDP 801 1_555 M MN MN . B MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc10 L O2B UDP . B UDP 801 1_555 M MN MN . B MN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? # _chem_comp.formula 'C9 H14 N2 O12 P2' _chem_comp.formula_weight 404.161 _chem_comp.id UDP _chem_comp.mon_nstd_flag . _chem_comp.name "URIDINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UDP sing 395 n n N1 C6 UDP sing 396 n n N1 C1' UDP sing 397 n n C2 N3 UDP sing 398 n n C2 O2 UDP doub 399 n n N3 C4 UDP sing 400 n n N3 HN3 UDP sing 401 n n C4 C5 UDP sing 402 n n C4 O4 UDP doub 403 n n C5 C6 UDP doub 404 n n C5 H5 UDP sing 405 n n C6 H6 UDP sing 406 n n C1' C2' UDP sing 407 n n C1' O4' UDP sing 408 n n C1' H1' UDP sing 409 n n C2' O2' UDP sing 410 n n C2' C3' UDP sing 411 n n C2' H2' UDP sing 412 n n O2' HO2' UDP sing 413 n n C3' C4' UDP sing 414 n n C3' O3' UDP sing 415 n n C3' H3' UDP sing 416 n n C4' O4' UDP sing 417 n n C4' C5' UDP sing 418 n n C4' H4' UDP sing 419 n n O3' HO3' UDP sing 420 n n C5' O5' UDP sing 421 n n C5' "H5'1" UDP sing 422 n n C5' "H5'2" UDP sing 423 n n O5' PA UDP sing 424 n n PA O1A UDP doub 425 n n PA O2A UDP sing 426 n n PA O3A UDP sing 427 n n O2A HOA2 UDP sing 428 n n O3A PB UDP sing 429 n n PB O1B UDP doub 430 n n PB O2B UDP sing 431 n n PB O3B UDP sing 432 n n O2B HOB2 UDP sing 433 n n O3B HOB3 UDP sing 434 n n # _atom_sites.entry_id 8YRL _atom_sites.fract_transf_matrix[1][1] 0.011885 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005302 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 701 701 MN MN . D 3 UDP A 1 702 801 UDP UDP . E 4 GOL A 1 703 3 GOL GOL . F 4 GOL A 1 704 5 GOL GOL . G 4 GOL A 1 705 6 GOL GOL . H 4 GOL A 1 706 11 GOL GOL . I 4 GOL A 1 707 12 GOL GOL . J 4 GOL A 1 708 13 GOL GOL . K 5 GZL A 1 709 601 GZL GZL . L 3 UDP B 1 801 801 UDP UDP . M 2 MN B 1 802 701 MN MN . N 4 GOL B 1 803 4 GOL GOL . O 4 GOL B 1 804 7 GOL GOL . P 4 GOL B 1 805 8 GOL GOL . Q 4 GOL B 1 806 14 GOL GOL . R 4 GOL B 1 807 15 GOL GOL . S 5 GZL B 1 808 601 GZL GZL . T 6 HOH A 1 801 89 HOH HOH . T 6 HOH A 2 802 65 HOH HOH . T 6 HOH A 3 803 193 HOH HOH . T 6 HOH A 4 804 98 HOH HOH . T 6 HOH A 5 805 118 HOH HOH . T 6 HOH A 6 806 35 HOH HOH . T 6 HOH A 7 807 44 HOH HOH . T 6 HOH A 8 808 38 HOH HOH . T 6 HOH A 9 809 86 HOH HOH . T 6 HOH A 10 810 195 HOH HOH . T 6 HOH A 11 811 147 HOH HOH . T 6 HOH A 12 812 221 HOH HOH . T 6 HOH A 13 813 4 HOH HOH . T 6 HOH A 14 814 90 HOH HOH . T 6 HOH A 15 815 125 HOH HOH . T 6 HOH A 16 816 183 HOH HOH . T 6 HOH A 17 817 236 HOH HOH . T 6 HOH A 18 818 16 HOH HOH . T 6 HOH A 19 819 292 HOH HOH . T 6 HOH A 20 820 81 HOH HOH . T 6 HOH A 21 821 179 HOH HOH . T 6 HOH A 22 822 9 HOH HOH . T 6 HOH A 23 823 112 HOH HOH . T 6 HOH A 24 824 103 HOH HOH . T 6 HOH A 25 825 113 HOH HOH . T 6 HOH A 26 826 52 HOH HOH . T 6 HOH A 27 827 266 HOH HOH . T 6 HOH A 28 828 7 HOH HOH . T 6 HOH A 29 829 159 HOH HOH . T 6 HOH A 30 830 238 HOH HOH . T 6 HOH A 31 831 306 HOH HOH . T 6 HOH A 32 832 101 HOH HOH . T 6 HOH A 33 833 6 HOH HOH . T 6 HOH A 34 834 32 HOH HOH . T 6 HOH A 35 835 144 HOH HOH . T 6 HOH A 36 836 63 HOH HOH . T 6 HOH A 37 837 18 HOH HOH . T 6 HOH A 38 838 187 HOH HOH . T 6 HOH A 39 839 305 HOH HOH . T 6 HOH A 40 840 148 HOH HOH . T 6 HOH A 41 841 196 HOH HOH . T 6 HOH A 42 842 135 HOH HOH . T 6 HOH A 43 843 40 HOH HOH . T 6 HOH A 44 844 47 HOH HOH . T 6 HOH A 45 845 256 HOH HOH . T 6 HOH A 46 846 220 HOH HOH . T 6 HOH A 47 847 128 HOH HOH . T 6 HOH A 48 848 73 HOH HOH . T 6 HOH A 49 849 156 HOH HOH . T 6 HOH A 50 850 197 HOH HOH . T 6 HOH A 51 851 182 HOH HOH . T 6 HOH A 52 852 106 HOH HOH . T 6 HOH A 53 853 67 HOH HOH . T 6 HOH A 54 854 249 HOH HOH . T 6 HOH A 55 855 205 HOH HOH . T 6 HOH A 56 856 108 HOH HOH . T 6 HOH A 57 857 121 HOH HOH . T 6 HOH A 58 858 129 HOH HOH . T 6 HOH A 59 859 331 HOH HOH . T 6 HOH A 60 860 14 HOH HOH . T 6 HOH A 61 861 84 HOH HOH . T 6 HOH A 62 862 168 HOH HOH . T 6 HOH A 63 863 157 HOH HOH . T 6 HOH A 64 864 279 HOH HOH . T 6 HOH A 65 865 240 HOH HOH . T 6 HOH A 66 866 71 HOH HOH . T 6 HOH A 67 867 12 HOH HOH . T 6 HOH A 68 868 232 HOH HOH . T 6 HOH A 69 869 289 HOH HOH . T 6 HOH A 70 870 127 HOH HOH . T 6 HOH A 71 871 265 HOH HOH . T 6 HOH A 72 872 21 HOH HOH . T 6 HOH A 73 873 116 HOH HOH . T 6 HOH A 74 874 152 HOH HOH . T 6 HOH A 75 875 104 HOH HOH . T 6 HOH A 76 876 173 HOH HOH . T 6 HOH A 77 877 207 HOH HOH . T 6 HOH A 78 878 169 HOH HOH . T 6 HOH A 79 879 153 HOH HOH . T 6 HOH A 80 880 110 HOH HOH . T 6 HOH A 81 881 273 HOH HOH . T 6 HOH A 82 882 149 HOH HOH . T 6 HOH A 83 883 48 HOH HOH . T 6 HOH A 84 884 302 HOH HOH . T 6 HOH A 85 885 301 HOH HOH . T 6 HOH A 86 886 130 HOH HOH . T 6 HOH A 87 887 235 HOH HOH . T 6 HOH A 88 888 114 HOH HOH . T 6 HOH A 89 889 155 HOH HOH . T 6 HOH A 90 890 164 HOH HOH . T 6 HOH A 91 891 247 HOH HOH . T 6 HOH A 92 892 22 HOH HOH . T 6 HOH A 93 893 188 HOH HOH . T 6 HOH A 94 894 332 HOH HOH . T 6 HOH A 95 895 137 HOH HOH . T 6 HOH A 96 896 180 HOH HOH . T 6 HOH A 97 897 307 HOH HOH . T 6 HOH A 98 898 133 HOH HOH . T 6 HOH A 99 899 286 HOH HOH . T 6 HOH A 100 900 223 HOH HOH . T 6 HOH A 101 901 243 HOH HOH . T 6 HOH A 102 902 43 HOH HOH . T 6 HOH A 103 903 111 HOH HOH . T 6 HOH A 104 904 143 HOH HOH . T 6 HOH A 105 905 229 HOH HOH . T 6 HOH A 106 906 20 HOH HOH . T 6 HOH A 107 907 31 HOH HOH . T 6 HOH A 108 908 241 HOH HOH . T 6 HOH A 109 909 326 HOH HOH . T 6 HOH A 110 910 154 HOH HOH . T 6 HOH A 111 911 338 HOH HOH . T 6 HOH A 112 912 145 HOH HOH . T 6 HOH A 113 913 87 HOH HOH . T 6 HOH A 114 914 132 HOH HOH . T 6 HOH A 115 915 158 HOH HOH . T 6 HOH A 116 916 186 HOH HOH . T 6 HOH A 117 917 136 HOH HOH . T 6 HOH A 118 918 215 HOH HOH . T 6 HOH A 119 919 300 HOH HOH . T 6 HOH A 120 920 142 HOH HOH . T 6 HOH A 121 921 160 HOH HOH . T 6 HOH A 122 922 53 HOH HOH . T 6 HOH A 123 923 165 HOH HOH . T 6 HOH A 124 924 259 HOH HOH . T 6 HOH A 125 925 219 HOH HOH . T 6 HOH A 126 926 281 HOH HOH . T 6 HOH A 127 927 93 HOH HOH . T 6 HOH A 128 928 321 HOH HOH . T 6 HOH A 129 929 131 HOH HOH . T 6 HOH A 130 930 212 HOH HOH . T 6 HOH A 131 931 42 HOH HOH . T 6 HOH A 132 932 253 HOH HOH . T 6 HOH A 133 933 334 HOH HOH . T 6 HOH A 134 934 284 HOH HOH . T 6 HOH A 135 935 298 HOH HOH . T 6 HOH A 136 936 190 HOH HOH . T 6 HOH A 137 937 324 HOH HOH . T 6 HOH A 138 938 263 HOH HOH . T 6 HOH A 139 939 336 HOH HOH . T 6 HOH A 140 940 264 HOH HOH . T 6 HOH A 141 941 51 HOH HOH . T 6 HOH A 142 942 26 HOH HOH . T 6 HOH A 143 943 124 HOH HOH . T 6 HOH A 144 944 339 HOH HOH . T 6 HOH A 145 945 333 HOH HOH . T 6 HOH A 146 946 170 HOH HOH . T 6 HOH A 147 947 268 HOH HOH . T 6 HOH A 148 948 316 HOH HOH . T 6 HOH A 149 949 325 HOH HOH . T 6 HOH A 150 950 288 HOH HOH . T 6 HOH A 151 951 337 HOH HOH . T 6 HOH A 152 952 257 HOH HOH . T 6 HOH A 153 953 318 HOH HOH . T 6 HOH A 154 954 315 HOH HOH . T 6 HOH A 155 955 248 HOH HOH . T 6 HOH A 156 956 304 HOH HOH . T 6 HOH A 157 957 262 HOH HOH . T 6 HOH A 158 958 151 HOH HOH . T 6 HOH A 159 959 150 HOH HOH . U 6 HOH B 1 901 329 HOH HOH . U 6 HOH B 2 902 120 HOH HOH . U 6 HOH B 3 903 335 HOH HOH . U 6 HOH B 4 904 61 HOH HOH . U 6 HOH B 5 905 269 HOH HOH . U 6 HOH B 6 906 68 HOH HOH . U 6 HOH B 7 907 314 HOH HOH . U 6 HOH B 8 908 216 HOH HOH . U 6 HOH B 9 909 282 HOH HOH . U 6 HOH B 10 910 29 HOH HOH . U 6 HOH B 11 911 208 HOH HOH . U 6 HOH B 12 912 295 HOH HOH . U 6 HOH B 13 913 181 HOH HOH . U 6 HOH B 14 914 39 HOH HOH . U 6 HOH B 15 915 64 HOH HOH . U 6 HOH B 16 916 28 HOH HOH . U 6 HOH B 17 917 202 HOH HOH . U 6 HOH B 18 918 230 HOH HOH . U 6 HOH B 19 919 69 HOH HOH . U 6 HOH B 20 920 56 HOH HOH . U 6 HOH B 21 921 287 HOH HOH . U 6 HOH B 22 922 141 HOH HOH . U 6 HOH B 23 923 167 HOH HOH . U 6 HOH B 24 924 24 HOH HOH . U 6 HOH B 25 925 49 HOH HOH . U 6 HOH B 26 926 2 HOH HOH . U 6 HOH B 27 927 62 HOH HOH . U 6 HOH B 28 928 70 HOH HOH . U 6 HOH B 29 929 36 HOH HOH . U 6 HOH B 30 930 231 HOH HOH . U 6 HOH B 31 931 25 HOH HOH . U 6 HOH B 32 932 30 HOH HOH . U 6 HOH B 33 933 267 HOH HOH . U 6 HOH B 34 934 23 HOH HOH . U 6 HOH B 35 935 46 HOH HOH . U 6 HOH B 36 936 3 HOH HOH . U 6 HOH B 37 937 199 HOH HOH . U 6 HOH B 38 938 15 HOH HOH . U 6 HOH B 39 939 33 HOH HOH . U 6 HOH B 40 940 10 HOH HOH . U 6 HOH B 41 941 79 HOH HOH . U 6 HOH B 42 942 27 HOH HOH . U 6 HOH B 43 943 200 HOH HOH . U 6 HOH B 44 944 107 HOH HOH . U 6 HOH B 45 945 83 HOH HOH . U 6 HOH B 46 946 13 HOH HOH . U 6 HOH B 47 947 95 HOH HOH . U 6 HOH B 48 948 66 HOH HOH . U 6 HOH B 49 949 1 HOH HOH . U 6 HOH B 50 950 278 HOH HOH . U 6 HOH B 51 951 234 HOH HOH . U 6 HOH B 52 952 244 HOH HOH . U 6 HOH B 53 953 204 HOH HOH . U 6 HOH B 54 954 294 HOH HOH . U 6 HOH B 55 955 258 HOH HOH . U 6 HOH B 56 956 5 HOH HOH . U 6 HOH B 57 957 206 HOH HOH . U 6 HOH B 58 958 75 HOH HOH . U 6 HOH B 59 959 122 HOH HOH . U 6 HOH B 60 960 74 HOH HOH . U 6 HOH B 61 961 115 HOH HOH . U 6 HOH B 62 962 11 HOH HOH . U 6 HOH B 63 963 55 HOH HOH . U 6 HOH B 64 964 227 HOH HOH . U 6 HOH B 65 965 72 HOH HOH . U 6 HOH B 66 966 96 HOH HOH . U 6 HOH B 67 967 8 HOH HOH . U 6 HOH B 68 968 277 HOH HOH . U 6 HOH B 69 969 139 HOH HOH . U 6 HOH B 70 970 19 HOH HOH . U 6 HOH B 71 971 97 HOH HOH . U 6 HOH B 72 972 163 HOH HOH . U 6 HOH B 73 973 177 HOH HOH . U 6 HOH B 74 974 50 HOH HOH . U 6 HOH B 75 975 239 HOH HOH . U 6 HOH B 76 976 176 HOH HOH . U 6 HOH B 77 977 91 HOH HOH . U 6 HOH B 78 978 252 HOH HOH . U 6 HOH B 79 979 303 HOH HOH . U 6 HOH B 80 980 77 HOH HOH . U 6 HOH B 81 981 198 HOH HOH . U 6 HOH B 82 982 94 HOH HOH . U 6 HOH B 83 983 293 HOH HOH . U 6 HOH B 84 984 123 HOH HOH . U 6 HOH B 85 985 224 HOH HOH . U 6 HOH B 86 986 209 HOH HOH . U 6 HOH B 87 987 201 HOH HOH . U 6 HOH B 88 988 283 HOH HOH . U 6 HOH B 89 989 174 HOH HOH . U 6 HOH B 90 990 100 HOH HOH . U 6 HOH B 91 991 222 HOH HOH . U 6 HOH B 92 992 57 HOH HOH . U 6 HOH B 93 993 78 HOH HOH . U 6 HOH B 94 994 308 HOH HOH . U 6 HOH B 95 995 58 HOH HOH . U 6 HOH B 96 996 172 HOH HOH . U 6 HOH B 97 997 41 HOH HOH . U 6 HOH B 98 998 138 HOH HOH . U 6 HOH B 99 999 80 HOH HOH . U 6 HOH B 100 1000 233 HOH HOH . U 6 HOH B 101 1001 214 HOH HOH . U 6 HOH B 102 1002 102 HOH HOH . U 6 HOH B 103 1003 109 HOH HOH . U 6 HOH B 104 1004 178 HOH HOH . U 6 HOH B 105 1005 117 HOH HOH . U 6 HOH B 106 1006 218 HOH HOH . U 6 HOH B 107 1007 340 HOH HOH . U 6 HOH B 108 1008 254 HOH HOH . U 6 HOH B 109 1009 146 HOH HOH . U 6 HOH B 110 1010 45 HOH HOH . U 6 HOH B 111 1011 88 HOH HOH . U 6 HOH B 112 1012 54 HOH HOH . U 6 HOH B 113 1013 17 HOH HOH . U 6 HOH B 114 1014 59 HOH HOH . U 6 HOH B 115 1015 76 HOH HOH . U 6 HOH B 116 1016 161 HOH HOH . U 6 HOH B 117 1017 99 HOH HOH . U 6 HOH B 118 1018 126 HOH HOH . U 6 HOH B 119 1019 60 HOH HOH . U 6 HOH B 120 1020 82 HOH HOH . U 6 HOH B 121 1021 291 HOH HOH . U 6 HOH B 122 1022 225 HOH HOH . U 6 HOH B 123 1023 140 HOH HOH . U 6 HOH B 124 1024 119 HOH HOH . U 6 HOH B 125 1025 327 HOH HOH . U 6 HOH B 126 1026 171 HOH HOH . U 6 HOH B 127 1027 285 HOH HOH . U 6 HOH B 128 1028 246 HOH HOH . U 6 HOH B 129 1029 85 HOH HOH . U 6 HOH B 130 1030 34 HOH HOH . U 6 HOH B 131 1031 312 HOH HOH . U 6 HOH B 132 1032 166 HOH HOH . U 6 HOH B 133 1033 226 HOH HOH . U 6 HOH B 134 1034 276 HOH HOH . U 6 HOH B 135 1035 297 HOH HOH . U 6 HOH B 136 1036 320 HOH HOH . U 6 HOH B 137 1037 311 HOH HOH . U 6 HOH B 138 1038 313 HOH HOH . U 6 HOH B 139 1039 210 HOH HOH . U 6 HOH B 140 1040 217 HOH HOH . U 6 HOH B 141 1041 105 HOH HOH . U 6 HOH B 142 1042 203 HOH HOH . U 6 HOH B 143 1043 175 HOH HOH . U 6 HOH B 144 1044 211 HOH HOH . U 6 HOH B 145 1045 260 HOH HOH . U 6 HOH B 146 1046 272 HOH HOH . U 6 HOH B 147 1047 189 HOH HOH . U 6 HOH B 148 1048 299 HOH HOH . U 6 HOH B 149 1049 237 HOH HOH . U 6 HOH B 150 1050 250 HOH HOH . U 6 HOH B 151 1051 37 HOH HOH . U 6 HOH B 152 1052 213 HOH HOH . U 6 HOH B 153 1053 330 HOH HOH . U 6 HOH B 154 1054 162 HOH HOH . U 6 HOH B 155 1055 245 HOH HOH . U 6 HOH B 156 1056 242 HOH HOH . U 6 HOH B 157 1057 280 HOH HOH . U 6 HOH B 158 1058 255 HOH HOH . U 6 HOH B 159 1059 261 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UDP . . . D 3 -26.814 10.152 -32.283 1 40.83 ? N1 UDP 702 A 1 HETATM 2 C C2 UDP . . . D 3 -26.738 10.5 -33.618 1 54.16 ? C2 UDP 702 A 1 HETATM 3 N N3 UDP . . . D 3 -25.893 11.545 -33.899 1 51.05 ? N3 UDP 702 A 1 HETATM 4 C C4 UDP . . . D 3 -25.134 12.262 -32.995 1 41.26 ? C4 UDP 702 A 1 HETATM 5 C C5 UDP . . . D 3 -25.268 11.843 -31.634 1 53.15 ? C5 UDP 702 A 1 HETATM 6 C C6 UDP . . . D 3 -26.087 10.822 -31.326 1 58.32 ? C6 UDP 702 A 1 HETATM 7 O O2 UDP . . . D 3 -27.37 9.923 -34.492 1 53.27 ? O2 UDP 702 A 1 HETATM 8 O O4 UDP . . . D 3 -24.414 13.188 -33.398 1 49.75 ? O4 UDP 702 A 1 HETATM 9 C C1' UDP . . . D 3 -27.7 9.037 -31.916 1 50.68 ? C1' UDP 702 A 1 HETATM 10 C C2' UDP . . . D 3 -26.979 7.684 -31.846 1 50.92 ? C2' UDP 702 A 1 HETATM 11 O O2' UDP . . . D 3 -27.835 6.639 -32.293 1 57.59 ? O2' UDP 702 A 1 HETATM 12 C C3' UDP . . . D 3 -26.671 7.569 -30.353 1 52.04 ? C3' UDP 702 A 1 HETATM 13 C C4' UDP . . . D 3 -27.896 8.221 -29.728 1 54.21 ? C4' UDP 702 A 1 HETATM 14 O O4' UDP . . . D 3 -28.236 9.297 -30.628 1 47.4 ? O4' UDP 702 A 1 HETATM 15 O O3' UDP . . . D 3 -26.543 6.216 -29.932 1 59.71 ? O3' UDP 702 A 1 HETATM 16 C C5' UDP . . . D 3 -27.704 8.762 -28.334 1 50.66 ? C5' UDP 702 A 1 HETATM 17 O O5' UDP . . . D 3 -26.633 9.729 -28.337 1 66.97 ? O5' UDP 702 A 1 HETATM 18 P PA UDP . . . D 3 -26.488 10.792 -27.176 1 54.41 ? PA UDP 702 A 1 HETATM 19 O O1A UDP . . . D 3 -25.713 11.93 -27.725 1 57.25 ? O1A UDP 702 A 1 HETATM 20 O O2A UDP . . . D 3 -27.844 11.114 -26.556 1 56.39 ? O2A UDP 702 A 1 HETATM 21 O O3A UDP . . . D 3 -25.651 10.047 -26.053 1 51.24 ? O3A UDP 702 A 1 HETATM 22 P PB UDP . . . D 3 -24.184 9.485 -26.258 1 48.92 ? PB UDP 702 A 1 HETATM 23 O O1B UDP . . . D 3 -24.147 8.352 -27.234 1 66.36 ? O1B UDP 702 A 1 HETATM 24 O O2B UDP . . . D 3 -23.762 9.096 -24.839 1 54.84 ? O2B UDP 702 A 1 HETATM 25 O O3B UDP . . . D 3 -23.401 10.72 -26.71 1 44.79 ? O3B UDP 702 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 69 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 25 #