data_8YSN # _model_server_result.job_id ZnjI4XBcpZ5C8somPe_0bw _model_server_result.datetime_utc '2025-02-12 03:46:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ysn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 8YSN # _exptl.entry_id 8YSN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8YSN _cell.length_a 49.344 _cell.length_b 73.161 _cell.length_c 101.605 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8YSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 8YSN _atom_sites.fract_transf_matrix[1][1] 0.020266 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013668 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009842 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 400 400 PO4 PO4 . C 3 HOH A 1 501 654 HOH HOH . C 3 HOH A 2 502 657 HOH HOH . C 3 HOH A 3 503 590 HOH HOH . C 3 HOH A 4 504 643 HOH HOH . C 3 HOH A 5 505 632 HOH HOH . C 3 HOH A 6 506 633 HOH HOH . C 3 HOH A 7 507 554 HOH HOH . C 3 HOH A 8 508 627 HOH HOH . C 3 HOH A 9 509 579 HOH HOH . C 3 HOH A 10 510 686 HOH HOH . C 3 HOH A 11 511 592 HOH HOH . C 3 HOH A 12 512 609 HOH HOH . C 3 HOH A 13 513 645 HOH HOH . C 3 HOH A 14 514 567 HOH HOH . C 3 HOH A 15 515 529 HOH HOH . C 3 HOH A 16 516 596 HOH HOH . C 3 HOH A 17 517 646 HOH HOH . C 3 HOH A 18 518 693 HOH HOH . C 3 HOH A 19 519 557 HOH HOH . C 3 HOH A 20 520 531 HOH HOH . C 3 HOH A 21 521 581 HOH HOH . C 3 HOH A 22 522 649 HOH HOH . C 3 HOH A 23 523 578 HOH HOH . C 3 HOH A 24 524 669 HOH HOH . C 3 HOH A 25 525 662 HOH HOH . C 3 HOH A 26 526 593 HOH HOH . C 3 HOH A 27 527 550 HOH HOH . C 3 HOH A 28 528 631 HOH HOH . C 3 HOH A 29 529 566 HOH HOH . C 3 HOH A 30 530 629 HOH HOH . C 3 HOH A 31 531 505 HOH HOH . C 3 HOH A 32 532 514 HOH HOH . C 3 HOH A 33 533 659 HOH HOH . C 3 HOH A 34 534 655 HOH HOH . C 3 HOH A 35 535 521 HOH HOH . C 3 HOH A 36 536 501 HOH HOH . C 3 HOH A 37 537 534 HOH HOH . C 3 HOH A 38 538 539 HOH HOH . C 3 HOH A 39 539 516 HOH HOH . C 3 HOH A 40 540 535 HOH HOH . C 3 HOH A 41 541 648 HOH HOH . C 3 HOH A 42 542 508 HOH HOH . C 3 HOH A 43 543 600 HOH HOH . C 3 HOH A 44 544 585 HOH HOH . C 3 HOH A 45 545 561 HOH HOH . C 3 HOH A 46 546 552 HOH HOH . C 3 HOH A 47 547 630 HOH HOH . C 3 HOH A 48 548 635 HOH HOH . C 3 HOH A 49 549 583 HOH HOH . C 3 HOH A 50 550 595 HOH HOH . C 3 HOH A 51 551 624 HOH HOH . C 3 HOH A 52 552 612 HOH HOH . C 3 HOH A 53 553 576 HOH HOH . C 3 HOH A 54 554 555 HOH HOH . C 3 HOH A 55 555 642 HOH HOH . C 3 HOH A 56 556 544 HOH HOH . C 3 HOH A 57 557 525 HOH HOH . C 3 HOH A 58 558 664 HOH HOH . C 3 HOH A 59 559 626 HOH HOH . C 3 HOH A 60 560 621 HOH HOH . C 3 HOH A 61 561 698 HOH HOH . C 3 HOH A 62 562 512 HOH HOH . C 3 HOH A 63 563 589 HOH HOH . C 3 HOH A 64 564 652 HOH HOH . C 3 HOH A 65 565 603 HOH HOH . C 3 HOH A 66 566 608 HOH HOH . C 3 HOH A 67 567 604 HOH HOH . C 3 HOH A 68 568 545 HOH HOH . C 3 HOH A 69 569 670 HOH HOH . C 3 HOH A 70 570 549 HOH HOH . C 3 HOH A 71 571 683 HOH HOH . C 3 HOH A 72 572 607 HOH HOH . C 3 HOH A 73 573 519 HOH HOH . C 3 HOH A 74 574 594 HOH HOH . C 3 HOH A 75 575 676 HOH HOH . C 3 HOH A 76 576 553 HOH HOH . C 3 HOH A 77 577 684 HOH HOH . C 3 HOH A 78 578 546 HOH HOH . C 3 HOH A 79 579 527 HOH HOH . C 3 HOH A 80 580 506 HOH HOH . C 3 HOH A 81 581 562 HOH HOH . C 3 HOH A 82 582 622 HOH HOH . C 3 HOH A 83 583 528 HOH HOH . C 3 HOH A 84 584 518 HOH HOH . C 3 HOH A 85 585 540 HOH HOH . C 3 HOH A 86 586 588 HOH HOH . C 3 HOH A 87 587 674 HOH HOH . C 3 HOH A 88 588 575 HOH HOH . C 3 HOH A 89 589 628 HOH HOH . C 3 HOH A 90 590 666 HOH HOH . C 3 HOH A 91 591 558 HOH HOH . C 3 HOH A 92 592 653 HOH HOH . C 3 HOH A 93 593 500 HOH HOH . C 3 HOH A 94 594 507 HOH HOH . C 3 HOH A 95 595 548 HOH HOH . C 3 HOH A 96 596 509 HOH HOH . C 3 HOH A 97 597 634 HOH HOH . C 3 HOH A 98 598 680 HOH HOH . C 3 HOH A 99 599 663 HOH HOH . C 3 HOH A 100 600 517 HOH HOH . C 3 HOH A 101 601 570 HOH HOH . C 3 HOH A 102 602 656 HOH HOH . C 3 HOH A 103 603 556 HOH HOH . C 3 HOH A 104 604 582 HOH HOH . C 3 HOH A 105 605 572 HOH HOH . C 3 HOH A 106 606 675 HOH HOH . C 3 HOH A 107 607 580 HOH HOH . C 3 HOH A 108 608 541 HOH HOH . C 3 HOH A 109 609 543 HOH HOH . C 3 HOH A 110 610 619 HOH HOH . C 3 HOH A 111 611 599 HOH HOH . C 3 HOH A 112 612 559 HOH HOH . C 3 HOH A 113 613 547 HOH HOH . C 3 HOH A 114 614 513 HOH HOH . C 3 HOH A 115 615 574 HOH HOH . C 3 HOH A 116 616 573 HOH HOH . C 3 HOH A 117 617 605 HOH HOH . C 3 HOH A 118 618 569 HOH HOH . C 3 HOH A 119 619 618 HOH HOH . C 3 HOH A 120 620 640 HOH HOH . C 3 HOH A 121 621 560 HOH HOH . C 3 HOH A 122 622 536 HOH HOH . C 3 HOH A 123 623 671 HOH HOH . C 3 HOH A 124 624 587 HOH HOH . C 3 HOH A 125 625 520 HOH HOH . C 3 HOH A 126 626 551 HOH HOH . C 3 HOH A 127 627 682 HOH HOH . C 3 HOH A 128 628 564 HOH HOH . C 3 HOH A 129 629 530 HOH HOH . C 3 HOH A 130 630 598 HOH HOH . C 3 HOH A 131 631 537 HOH HOH . C 3 HOH A 132 632 533 HOH HOH . C 3 HOH A 133 633 511 HOH HOH . C 3 HOH A 134 634 524 HOH HOH . C 3 HOH A 135 635 526 HOH HOH . C 3 HOH A 136 636 601 HOH HOH . C 3 HOH A 137 637 661 HOH HOH . C 3 HOH A 138 638 620 HOH HOH . C 3 HOH A 139 639 660 HOH HOH . C 3 HOH A 140 640 610 HOH HOH . C 3 HOH A 141 641 577 HOH HOH . C 3 HOH A 142 642 510 HOH HOH . C 3 HOH A 143 643 584 HOH HOH . C 3 HOH A 144 644 602 HOH HOH . C 3 HOH A 145 645 668 HOH HOH . C 3 HOH A 146 646 586 HOH HOH . C 3 HOH A 147 647 591 HOH HOH . C 3 HOH A 148 648 658 HOH HOH . C 3 HOH A 149 649 692 HOH HOH . C 3 HOH A 150 650 650 HOH HOH . C 3 HOH A 151 651 651 HOH HOH . C 3 HOH A 152 652 565 HOH HOH . C 3 HOH A 153 653 523 HOH HOH . C 3 HOH A 154 654 623 HOH HOH . C 3 HOH A 155 655 502 HOH HOH . C 3 HOH A 156 656 672 HOH HOH . C 3 HOH A 157 657 504 HOH HOH . C 3 HOH A 158 658 542 HOH HOH . C 3 HOH A 159 659 616 HOH HOH . C 3 HOH A 160 660 679 HOH HOH . C 3 HOH A 161 661 503 HOH HOH . C 3 HOH A 162 662 681 HOH HOH . C 3 HOH A 163 663 639 HOH HOH . C 3 HOH A 164 664 568 HOH HOH . C 3 HOH A 165 665 638 HOH HOH . C 3 HOH A 166 666 696 HOH HOH . C 3 HOH A 167 667 538 HOH HOH . C 3 HOH A 168 668 597 HOH HOH . C 3 HOH A 169 669 615 HOH HOH . C 3 HOH A 170 670 571 HOH HOH . C 3 HOH A 171 671 625 HOH HOH . C 3 HOH A 172 672 685 HOH HOH . C 3 HOH A 173 673 665 HOH HOH . C 3 HOH A 174 674 515 HOH HOH . C 3 HOH A 175 675 677 HOH HOH . C 3 HOH A 176 676 644 HOH HOH . C 3 HOH A 177 677 695 HOH HOH . C 3 HOH A 178 678 667 HOH HOH . C 3 HOH A 179 679 637 HOH HOH . C 3 HOH A 180 680 606 HOH HOH . C 3 HOH A 181 681 522 HOH HOH . C 3 HOH A 182 682 613 HOH HOH . C 3 HOH A 183 683 563 HOH HOH . C 3 HOH A 184 684 532 HOH HOH . C 3 HOH A 185 685 611 HOH HOH . C 3 HOH A 186 686 697 HOH HOH . C 3 HOH A 187 687 689 HOH HOH . C 3 HOH A 188 688 678 HOH HOH . C 3 HOH A 189 689 691 HOH HOH . C 3 HOH A 190 690 617 HOH HOH . C 3 HOH A 191 691 687 HOH HOH . C 3 HOH A 192 692 647 HOH HOH . C 3 HOH A 193 693 673 HOH HOH . C 3 HOH A 194 694 688 HOH HOH . C 3 HOH A 195 695 614 HOH HOH . C 3 HOH A 196 696 641 HOH HOH . C 3 HOH A 197 697 694 HOH HOH . C 3 HOH A 198 698 636 HOH HOH . C 3 HOH A 199 699 690 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -15.171 1.166 18.956 1 44.11 0 P PO4 400 A 1 HETATM 2 O O1 PO4 . . . B 2 -14.981 2.097 17.688 1 27.4 0 O1 PO4 400 A 1 HETATM 3 O O2 PO4 . . . B 2 -16.62 1.233 19.445 1 40.74 0 O2 PO4 400 A 1 HETATM 4 O O3 PO4 . . . B 2 -14.886 -0.272 18.605 1 53.7 0 O3 PO4 400 A 1 HETATM 5 O O4 PO4 . . . B 2 -14.177 1.595 20.046 1 46.46 0 O4 PO4 400 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #