data_8YTK # _model_server_result.job_id Y1Nz7OrjbjbDG5O3wb0gcA _model_server_result.datetime_utc '2025-07-14 06:26:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ytk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1601}' # _entry.id 8YTK # _exptl.entry_id 8YTK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.451 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{S})-~{N}-[3-(4-azanylquinazolin-7-yl)phenyl]sulfonylpyrrolidine-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.629 _cell.angle_gamma 90 _cell.entry_id 8YTK _cell.length_a 71.602 _cell.length_b 92.157 _cell.length_c 86.621 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8YTK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 465 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 1453 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 507 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 1495 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.392 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H19 N5 O3 S' _chem_comp.formula_weight 397.451 _chem_comp.id W2H _chem_comp.mon_nstd_flag . _chem_comp.name (2~{S})-~{N}-[3-(4-azanylquinazolin-7-yl)phenyl]sulfonylpyrrolidine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 W2H doub 385 n y N1 C6 W2H sing 386 n y C2 N3 W2H sing 387 n y N3 C4 W2H doub 388 n y C4 C5 W2H sing 389 n y C4 C7 W2H sing 390 n y C5 C6 W2H doub 391 n y C5 C10 W2H sing 392 n y C6 N11 W2H sing 393 n n C7 C8 W2H doub 394 n y C8 C9 W2H sing 395 n y C8 C12 W2H sing 396 n n C9 C10 W2H doub 397 n y C12 C13 W2H sing 398 n y C12 C17 W2H doub 399 n y C13 C14 W2H doub 400 n y C14 C15 W2H sing 401 n y C15 C16 W2H doub 402 n y C16 C17 W2H sing 403 n y C16 S18 W2H sing 404 n n S18 O19 W2H doub 405 n n S18 N20 W2H sing 406 n n S18 O21 W2H doub 407 n n N20 C22 W2H sing 408 n n C22 C23 W2H sing 409 n n C22 O24 W2H doub 410 n n C23 C25 W2H sing 411 n n C23 N28 W2H sing 412 n n C25 C26 W2H sing 413 n n C26 C27 W2H sing 414 n n C27 N28 W2H sing 415 n n C7 HC7 W2H sing 416 n n C9 HC9 W2H sing 417 n n C2 HC2 W2H sing 418 n n C10 HC10 W2H sing 419 n n N11 H11B W2H sing 420 n n N11 H11A W2H sing 421 n n C13 HC13 W2H sing 422 n n C14 HC14 W2H sing 423 n n C15 HC15 W2H sing 424 n n C17 HC17 W2H sing 425 n n N20 HN20 W2H sing 426 n n C23 HC23 W2H sing 427 n n C25 H25A W2H sing 428 n n C25 H25B W2H sing 429 n n C26 H26B W2H sing 430 n n C26 H26A W2H sing 431 n n C27 H27A W2H sing 432 n n C27 H27B W2H sing 433 n n N28 H1 W2H sing 434 n n # _atom_sites.entry_id 8YTK _atom_sites.fract_transf_matrix[1][1] 0.013966 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004708 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010851 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 W2H A 1 1601 1 W2H XXX . D 3 EDO A 1 1602 2 EDO EDO . E 3 EDO A 1 1603 3 EDO EDO . F 2 W2H B 1 1601 2 W2H XXX . G 3 EDO B 1 1602 1 EDO EDO . H 4 HOH A 1 1701 40 HOH HOH . H 4 HOH A 2 1702 63 HOH HOH . H 4 HOH A 3 1703 19 HOH HOH . H 4 HOH A 4 1704 32 HOH HOH . H 4 HOH A 5 1705 76 HOH HOH . H 4 HOH A 6 1706 84 HOH HOH . H 4 HOH A 7 1707 79 HOH HOH . H 4 HOH A 8 1708 2 HOH HOH . H 4 HOH A 9 1709 6 HOH HOH . H 4 HOH A 10 1710 82 HOH HOH . H 4 HOH A 11 1711 87 HOH HOH . H 4 HOH A 12 1712 41 HOH HOH . H 4 HOH A 13 1713 9 HOH HOH . H 4 HOH A 14 1714 42 HOH HOH . H 4 HOH A 15 1715 16 HOH HOH . H 4 HOH A 16 1716 38 HOH HOH . H 4 HOH A 17 1717 53 HOH HOH . H 4 HOH A 18 1718 36 HOH HOH . H 4 HOH A 19 1719 75 HOH HOH . H 4 HOH A 20 1720 18 HOH HOH . H 4 HOH A 21 1721 83 HOH HOH . H 4 HOH A 22 1722 33 HOH HOH . H 4 HOH A 23 1723 81 HOH HOH . H 4 HOH A 24 1724 43 HOH HOH . H 4 HOH A 25 1725 39 HOH HOH . H 4 HOH A 26 1726 52 HOH HOH . H 4 HOH A 27 1727 86 HOH HOH . H 4 HOH A 28 1728 89 HOH HOH . H 4 HOH A 29 1729 101 HOH HOH . H 4 HOH A 30 1730 21 HOH HOH . H 4 HOH A 31 1731 37 HOH HOH . H 4 HOH A 32 1732 44 HOH HOH . H 4 HOH A 33 1733 85 HOH HOH . H 4 HOH A 34 1734 29 HOH HOH . H 4 HOH A 35 1735 51 HOH HOH . H 4 HOH A 36 1736 102 HOH HOH . H 4 HOH A 37 1737 35 HOH HOH . H 4 HOH A 38 1738 92 HOH HOH . H 4 HOH A 39 1739 30 HOH HOH . H 4 HOH A 40 1740 22 HOH HOH . H 4 HOH A 41 1741 56 HOH HOH . H 4 HOH A 42 1742 74 HOH HOH . H 4 HOH A 43 1743 45 HOH HOH . H 4 HOH A 44 1744 28 HOH HOH . H 4 HOH A 45 1745 49 HOH HOH . H 4 HOH A 46 1746 34 HOH HOH . H 4 HOH A 47 1747 47 HOH HOH . H 4 HOH A 48 1748 91 HOH HOH . H 4 HOH A 49 1749 77 HOH HOH . H 4 HOH A 50 1750 50 HOH HOH . H 4 HOH A 51 1751 10 HOH HOH . H 4 HOH A 52 1752 23 HOH HOH . H 4 HOH A 53 1753 80 HOH HOH . H 4 HOH A 54 1754 78 HOH HOH . H 4 HOH A 55 1755 88 HOH HOH . H 4 HOH A 56 1756 7 HOH HOH . H 4 HOH A 57 1757 46 HOH HOH . H 4 HOH A 58 1758 17 HOH HOH . I 4 HOH B 1 1701 70 HOH HOH . I 4 HOH B 2 1702 1 HOH HOH . I 4 HOH B 3 1703 57 HOH HOH . I 4 HOH B 4 1704 25 HOH HOH . I 4 HOH B 5 1705 31 HOH HOH . I 4 HOH B 6 1706 13 HOH HOH . I 4 HOH B 7 1707 59 HOH HOH . I 4 HOH B 8 1708 4 HOH HOH . I 4 HOH B 9 1709 60 HOH HOH . I 4 HOH B 10 1710 65 HOH HOH . I 4 HOH B 11 1711 3 HOH HOH . I 4 HOH B 12 1712 62 HOH HOH . I 4 HOH B 13 1713 54 HOH HOH . I 4 HOH B 14 1714 24 HOH HOH . I 4 HOH B 15 1715 100 HOH HOH . I 4 HOH B 16 1716 8 HOH HOH . I 4 HOH B 17 1717 58 HOH HOH . I 4 HOH B 18 1718 95 HOH HOH . I 4 HOH B 19 1719 96 HOH HOH . I 4 HOH B 20 1720 64 HOH HOH . I 4 HOH B 21 1721 26 HOH HOH . I 4 HOH B 22 1722 27 HOH HOH . I 4 HOH B 23 1723 12 HOH HOH . I 4 HOH B 24 1724 61 HOH HOH . I 4 HOH B 25 1725 72 HOH HOH . I 4 HOH B 26 1726 94 HOH HOH . I 4 HOH B 27 1727 99 HOH HOH . I 4 HOH B 28 1728 69 HOH HOH . I 4 HOH B 29 1729 90 HOH HOH . I 4 HOH B 30 1730 5 HOH HOH . I 4 HOH B 31 1731 71 HOH HOH . I 4 HOH B 32 1732 11 HOH HOH . I 4 HOH B 33 1733 55 HOH HOH . I 4 HOH B 34 1734 68 HOH HOH . I 4 HOH B 35 1735 97 HOH HOH . I 4 HOH B 36 1736 15 HOH HOH . I 4 HOH B 37 1737 98 HOH HOH . I 4 HOH B 38 1738 66 HOH HOH . I 4 HOH B 39 1739 14 HOH HOH . I 4 HOH B 40 1740 73 HOH HOH . I 4 HOH B 41 1741 48 HOH HOH . I 4 HOH B 42 1742 20 HOH HOH . I 4 HOH B 43 1743 93 HOH HOH . I 4 HOH B 44 1744 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 W2H . . . C 2 14.21 -10.627 12.077 1 29.69 0 N1 W2H 1601 A 1 HETATM 2 C C7 W2H . . . C 2 17.904 -12.502 12.251 1 28.34 0 C7 W2H 1601 A 1 HETATM 3 C C8 W2H . . . C 2 18.964 -11.966 12.968 1 28.47 0 C8 W2H 1601 A 1 HETATM 4 C C9 W2H . . . C 2 18.804 -10.703 13.551 1 28.02 0 C9 W2H 1601 A 1 HETATM 5 C C5 W2H . . . C 2 16.508 -10.585 12.811 1 27.86 0 C5 W2H 1601 A 1 HETATM 6 C C6 W2H . . . C 2 15.187 -10.005 12.738 1 27.97 0 C6 W2H 1601 A 1 HETATM 7 N N3 W2H . . . C 2 15.64 -12.452 11.499 1 28.19 0 N3 W2H 1601 A 1 HETATM 8 C C4 W2H . . . C 2 16.664 -11.835 12.17 1 28.05 0 C4 W2H 1601 A 1 HETATM 9 C C2 W2H . . . C 2 14.495 -11.799 11.502 1 28.83 0 C2 W2H 1601 A 1 HETATM 10 C C10 W2H . . . C 2 17.62 -10.032 13.484 1 27.88 0 C10 W2H 1601 A 1 HETATM 11 N N11 W2H . . . C 2 14.888 -8.873 13.378 1 27.69 0 N11 W2H 1601 A 1 HETATM 12 C C12 W2H . . . C 2 20.169 -12.79 13.242 1 27.42 0 C12 W2H 1601 A 1 HETATM 13 C C13 W2H . . . C 2 20.249 -14.107 12.789 1 27.59 0 C13 W2H 1601 A 1 HETATM 14 C C14 W2H . . . C 2 21.301 -14.924 13.157 1 27.77 0 C14 W2H 1601 A 1 HETATM 15 C C15 W2H . . . C 2 22.311 -14.443 13.968 1 28.08 0 C15 W2H 1601 A 1 HETATM 16 C C16 W2H . . . C 2 22.261 -13.125 14.388 1 27.55 0 C16 W2H 1601 A 1 HETATM 17 C C17 W2H . . . C 2 21.205 -12.298 14.042 1 26.94 0 C17 W2H 1601 A 1 HETATM 18 S S18 W2H . . . C 2 23.595 -12.464 15.32 1 27.95 0 S18 W2H 1601 A 1 HETATM 19 O O19 W2H . . . C 2 23.074 -11.5 16.241 1 28.28 0 O19 W2H 1601 A 1 HETATM 20 N N20 W2H . . . C 2 24.216 -13.719 16.16 1 27.27 0 N20 W2H 1601 A 1 HETATM 21 O O21 W2H . . . C 2 24.629 -12.088 14.406 1 29 0 O21 W2H 1601 A 1 HETATM 22 C C22 W2H . . . C 2 23.721 -14.193 17.327 1 26.82 0 C22 W2H 1601 A 1 HETATM 23 C C23 W2H . . . C 2 24.433 -15.42 17.889 1 25.9 0 C23 W2H 1601 A 1 HETATM 24 O O24 W2H . . . C 2 22.758 -13.707 17.908 1 27.71 0 O24 W2H 1601 A 1 HETATM 25 C C25 W2H . . . C 2 24.051 -16.681 17.094 1 25.92 0 C25 W2H 1601 A 1 HETATM 26 C C26 W2H . . . C 2 23.476 -17.643 18.122 1 25.7 0 C26 W2H 1601 A 1 HETATM 27 C C27 W2H . . . C 2 23.096 -16.77 19.293 1 25.4 0 C27 W2H 1601 A 1 HETATM 28 N N28 W2H . . . C 2 24.065 -15.672 19.289 1 25.17 0 N28 W2H 1601 A 1 # _model_server_stats.io_time_ms 118 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 395 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #