data_8YX2 # _model_server_result.job_id 9Xh9pS2bWIINqjUg8GQaWw _model_server_result.datetime_utc '2024-12-16 03:31:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8yx2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8YX2 # _exptl.entry_id 8YX2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8YX2 _cell.length_a 60.632 _cell.length_b 98.322 _cell.length_c 145.686 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8YX2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 190 B CYS 189 1_555 D ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc2 A O CYS 227 B CYS 226 1_555 D ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc3 A SG CYS 227 B CYS 226 1_555 D ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc4 B SG CYS 190 A CYS 189 1_555 G ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc5 B SG CYS 193 A CYS 192 1_555 G ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc6 B SG CYS 225 A CYS 224 1_555 G ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc7 B SG CYS 227 A CYS 226 1_555 G ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8YX2 _atom_sites.fract_transf_matrix[1][1] 0.016493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010171 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN B 1 401 361 ZN ZN . D 2 ZN B 1 402 362 ZN ZN . E 3 A1LZ5 B 1 403 400 A1LZ5 273 . F 3 A1LZ5 A 1 401 400 A1LZ5 273 . G 2 ZN A 1 402 361 ZN ZN . H 2 ZN A 1 403 362 ZN ZN . I 4 HOH B 1 501 27 HOH HOH . I 4 HOH B 2 502 117 HOH HOH . I 4 HOH B 3 503 97 HOH HOH . I 4 HOH B 4 504 2 HOH HOH . I 4 HOH B 5 505 175 HOH HOH . I 4 HOH B 6 506 32 HOH HOH . I 4 HOH B 7 507 182 HOH HOH . I 4 HOH B 8 508 7 HOH HOH . I 4 HOH B 9 509 30 HOH HOH . I 4 HOH B 10 510 52 HOH HOH . I 4 HOH B 11 511 171 HOH HOH . I 4 HOH B 12 512 40 HOH HOH . I 4 HOH B 13 513 116 HOH HOH . I 4 HOH B 14 514 146 HOH HOH . I 4 HOH B 15 515 129 HOH HOH . I 4 HOH B 16 516 126 HOH HOH . I 4 HOH B 17 517 72 HOH HOH . I 4 HOH B 18 518 38 HOH HOH . I 4 HOH B 19 519 26 HOH HOH . I 4 HOH B 20 520 98 HOH HOH . I 4 HOH B 21 521 139 HOH HOH . I 4 HOH B 22 522 25 HOH HOH . I 4 HOH B 23 523 35 HOH HOH . I 4 HOH B 24 524 115 HOH HOH . I 4 HOH B 25 525 8 HOH HOH . I 4 HOH B 26 526 4 HOH HOH . I 4 HOH B 27 527 29 HOH HOH . I 4 HOH B 28 528 34 HOH HOH . I 4 HOH B 29 529 107 HOH HOH . I 4 HOH B 30 530 145 HOH HOH . I 4 HOH B 31 531 157 HOH HOH . I 4 HOH B 32 532 18 HOH HOH . I 4 HOH B 33 533 124 HOH HOH . I 4 HOH B 34 534 31 HOH HOH . I 4 HOH B 35 535 50 HOH HOH . I 4 HOH B 36 536 67 HOH HOH . I 4 HOH B 37 537 91 HOH HOH . I 4 HOH B 38 538 3 HOH HOH . I 4 HOH B 39 539 16 HOH HOH . I 4 HOH B 40 540 132 HOH HOH . I 4 HOH B 41 541 66 HOH HOH . I 4 HOH B 42 542 14 HOH HOH . I 4 HOH B 43 543 61 HOH HOH . I 4 HOH B 44 544 154 HOH HOH . I 4 HOH B 45 545 99 HOH HOH . I 4 HOH B 46 546 118 HOH HOH . I 4 HOH B 47 547 180 HOH HOH . I 4 HOH B 48 548 21 HOH HOH . I 4 HOH B 49 549 105 HOH HOH . I 4 HOH B 50 550 51 HOH HOH . I 4 HOH B 51 551 81 HOH HOH . I 4 HOH B 52 552 12 HOH HOH . I 4 HOH B 53 553 164 HOH HOH . I 4 HOH B 54 554 127 HOH HOH . I 4 HOH B 55 555 68 HOH HOH . I 4 HOH B 56 556 167 HOH HOH . I 4 HOH B 57 557 125 HOH HOH . I 4 HOH B 58 558 113 HOH HOH . I 4 HOH B 59 559 158 HOH HOH . I 4 HOH B 60 560 22 HOH HOH . I 4 HOH B 61 561 9 HOH HOH . I 4 HOH B 62 562 24 HOH HOH . I 4 HOH B 63 563 133 HOH HOH . I 4 HOH B 64 564 188 HOH HOH . I 4 HOH B 65 565 111 HOH HOH . I 4 HOH B 66 566 114 HOH HOH . I 4 HOH B 67 567 85 HOH HOH . I 4 HOH B 68 568 48 HOH HOH . I 4 HOH B 69 569 108 HOH HOH . I 4 HOH B 70 570 170 HOH HOH . I 4 HOH B 71 571 179 HOH HOH . I 4 HOH B 72 572 70 HOH HOH . I 4 HOH B 73 573 17 HOH HOH . I 4 HOH B 74 574 165 HOH HOH . I 4 HOH B 75 575 138 HOH HOH . I 4 HOH B 76 576 149 HOH HOH . I 4 HOH B 77 577 177 HOH HOH . I 4 HOH B 78 578 74 HOH HOH . I 4 HOH B 79 579 176 HOH HOH . I 4 HOH B 80 580 135 HOH HOH . I 4 HOH B 81 581 155 HOH HOH . I 4 HOH B 82 582 189 HOH HOH . I 4 HOH B 83 583 151 HOH HOH . I 4 HOH B 84 584 159 HOH HOH . J 4 HOH A 1 501 69 HOH HOH . J 4 HOH A 2 502 20 HOH HOH . J 4 HOH A 3 503 150 HOH HOH . J 4 HOH A 4 504 136 HOH HOH . J 4 HOH A 5 505 77 HOH HOH . J 4 HOH A 6 506 1 HOH HOH . J 4 HOH A 7 507 10 HOH HOH . J 4 HOH A 8 508 93 HOH HOH . J 4 HOH A 9 509 19 HOH HOH . J 4 HOH A 10 510 92 HOH HOH . J 4 HOH A 11 511 41 HOH HOH . J 4 HOH A 12 512 15 HOH HOH . J 4 HOH A 13 513 101 HOH HOH . J 4 HOH A 14 514 65 HOH HOH . J 4 HOH A 15 515 73 HOH HOH . J 4 HOH A 16 516 42 HOH HOH . J 4 HOH A 17 517 47 HOH HOH . J 4 HOH A 18 518 140 HOH HOH . J 4 HOH A 19 519 62 HOH HOH . J 4 HOH A 20 520 174 HOH HOH . J 4 HOH A 21 521 187 HOH HOH . J 4 HOH A 22 522 94 HOH HOH . J 4 HOH A 23 523 130 HOH HOH . J 4 HOH A 24 524 148 HOH HOH . J 4 HOH A 25 525 123 HOH HOH . J 4 HOH A 26 526 6 HOH HOH . J 4 HOH A 27 527 128 HOH HOH . J 4 HOH A 28 528 143 HOH HOH . J 4 HOH A 29 529 28 HOH HOH . J 4 HOH A 30 530 45 HOH HOH . J 4 HOH A 31 531 110 HOH HOH . J 4 HOH A 32 532 78 HOH HOH . J 4 HOH A 33 533 137 HOH HOH . J 4 HOH A 34 534 54 HOH HOH . J 4 HOH A 35 535 56 HOH HOH . J 4 HOH A 36 536 104 HOH HOH . J 4 HOH A 37 537 55 HOH HOH . J 4 HOH A 38 538 60 HOH HOH . J 4 HOH A 39 539 131 HOH HOH . J 4 HOH A 40 540 57 HOH HOH . J 4 HOH A 41 541 89 HOH HOH . J 4 HOH A 42 542 100 HOH HOH . J 4 HOH A 43 543 44 HOH HOH . J 4 HOH A 44 544 39 HOH HOH . J 4 HOH A 45 545 33 HOH HOH . J 4 HOH A 46 546 43 HOH HOH . J 4 HOH A 47 547 82 HOH HOH . J 4 HOH A 48 548 63 HOH HOH . J 4 HOH A 49 549 79 HOH HOH . J 4 HOH A 50 550 87 HOH HOH . J 4 HOH A 51 551 46 HOH HOH . J 4 HOH A 52 552 152 HOH HOH . J 4 HOH A 53 553 76 HOH HOH . J 4 HOH A 54 554 134 HOH HOH . J 4 HOH A 55 555 71 HOH HOH . J 4 HOH A 56 556 186 HOH HOH . J 4 HOH A 57 557 121 HOH HOH . J 4 HOH A 58 558 75 HOH HOH . J 4 HOH A 59 559 11 HOH HOH . J 4 HOH A 60 560 103 HOH HOH . J 4 HOH A 61 561 5 HOH HOH . J 4 HOH A 62 562 58 HOH HOH . J 4 HOH A 63 563 142 HOH HOH . J 4 HOH A 64 564 36 HOH HOH . J 4 HOH A 65 565 53 HOH HOH . J 4 HOH A 66 566 49 HOH HOH . J 4 HOH A 67 567 112 HOH HOH . J 4 HOH A 68 568 13 HOH HOH . J 4 HOH A 69 569 147 HOH HOH . J 4 HOH A 70 570 161 HOH HOH . J 4 HOH A 71 571 122 HOH HOH . J 4 HOH A 72 572 169 HOH HOH . J 4 HOH A 73 573 90 HOH HOH . J 4 HOH A 74 574 84 HOH HOH . J 4 HOH A 75 575 120 HOH HOH . J 4 HOH A 76 576 183 HOH HOH . J 4 HOH A 77 577 106 HOH HOH . J 4 HOH A 78 578 88 HOH HOH . J 4 HOH A 79 579 96 HOH HOH . J 4 HOH A 80 580 109 HOH HOH . J 4 HOH A 81 581 144 HOH HOH . J 4 HOH A 82 582 86 HOH HOH . J 4 HOH A 83 583 23 HOH HOH . J 4 HOH A 84 584 83 HOH HOH . J 4 HOH A 85 585 172 HOH HOH . J 4 HOH A 86 586 181 HOH HOH . J 4 HOH A 87 587 80 HOH HOH . J 4 HOH A 88 588 95 HOH HOH . J 4 HOH A 89 589 168 HOH HOH . J 4 HOH A 90 590 141 HOH HOH . J 4 HOH A 91 591 102 HOH HOH . J 4 HOH A 92 592 163 HOH HOH . J 4 HOH A 93 593 162 HOH HOH . J 4 HOH A 94 594 160 HOH HOH . J 4 HOH A 95 595 64 HOH HOH . J 4 HOH A 96 596 178 HOH HOH . J 4 HOH A 97 597 185 HOH HOH . J 4 HOH A 98 598 119 HOH HOH . J 4 HOH A 99 599 37 HOH HOH . J 4 HOH A 100 600 184 HOH HOH . J 4 HOH A 101 601 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.832 _atom_site.Cartn_y 32.57 _atom_site.Cartn_z 61.456 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 126.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #