data_8Z02 # _model_server_result.job_id odzyb9kFAmH0e6VJvFr4IQ _model_server_result.datetime_utc '2024-12-12 10:29:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z02 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2001}' # _entry.id 8Z02 # _exptl.entry_id 8Z02 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Z02 _cell.length_a 56.63 _cell.length_b 105.7 _cell.length_c 126.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z02 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 8Z02 _atom_sites.fract_transf_matrix[1][1] 0.017658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009461 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007888 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 COA A 1 2001 2001 COA COA . D 4 PO4 A 1 2002 2002 PO4 PO4 . E 5 HOH A 1 2101 2101 HOH HOH . E 5 HOH A 2 2102 2102 HOH HOH . E 5 HOH A 3 2103 2103 HOH HOH . E 5 HOH A 4 2104 2104 HOH HOH . E 5 HOH A 5 2105 2105 HOH HOH . E 5 HOH A 6 2106 2106 HOH HOH . E 5 HOH A 7 2107 2107 HOH HOH . E 5 HOH A 8 2108 2108 HOH HOH . E 5 HOH A 9 2109 2109 HOH HOH . E 5 HOH A 10 2110 2110 HOH HOH . E 5 HOH A 11 2111 2111 HOH HOH . E 5 HOH A 12 2112 2112 HOH HOH . E 5 HOH A 13 2113 2113 HOH HOH . E 5 HOH A 14 2114 2114 HOH HOH . E 5 HOH A 15 2115 2115 HOH HOH . E 5 HOH A 16 2116 2116 HOH HOH . E 5 HOH A 17 2117 2117 HOH HOH . E 5 HOH A 18 2118 2118 HOH HOH . E 5 HOH A 19 2119 2119 HOH HOH . E 5 HOH A 20 2120 2120 HOH HOH . E 5 HOH A 21 2121 2121 HOH HOH . E 5 HOH A 22 2122 2122 HOH HOH . E 5 HOH A 23 2123 2123 HOH HOH . E 5 HOH A 24 2124 2124 HOH HOH . E 5 HOH A 25 2125 2125 HOH HOH . E 5 HOH A 26 2126 2126 HOH HOH . E 5 HOH A 27 2127 2127 HOH HOH . E 5 HOH A 28 2128 2128 HOH HOH . E 5 HOH A 29 2129 2129 HOH HOH . E 5 HOH A 30 2130 2130 HOH HOH . E 5 HOH A 31 2131 2131 HOH HOH . E 5 HOH A 32 2132 2132 HOH HOH . E 5 HOH A 33 2133 2133 HOH HOH . E 5 HOH A 34 2134 2134 HOH HOH . E 5 HOH A 35 2135 2135 HOH HOH . E 5 HOH A 36 2136 2136 HOH HOH . E 5 HOH A 37 2137 2137 HOH HOH . E 5 HOH A 38 2138 2138 HOH HOH . E 5 HOH A 39 2139 2139 HOH HOH . E 5 HOH A 40 2140 2140 HOH HOH . E 5 HOH A 41 2141 2141 HOH HOH . E 5 HOH A 42 2142 2142 HOH HOH . E 5 HOH A 43 2143 2143 HOH HOH . E 5 HOH A 44 2144 2144 HOH HOH . E 5 HOH A 45 2145 2145 HOH HOH . E 5 HOH A 46 2146 2146 HOH HOH . E 5 HOH A 47 2147 2147 HOH HOH . E 5 HOH A 48 2148 2148 HOH HOH . E 5 HOH A 49 2149 2149 HOH HOH . E 5 HOH A 50 2150 2150 HOH HOH . E 5 HOH A 51 2151 2151 HOH HOH . E 5 HOH A 52 2152 2152 HOH HOH . E 5 HOH A 53 2153 2153 HOH HOH . E 5 HOH A 54 2154 2154 HOH HOH . E 5 HOH A 55 2155 2155 HOH HOH . E 5 HOH A 56 2156 2156 HOH HOH . E 5 HOH A 57 2157 2157 HOH HOH . E 5 HOH A 58 2158 2158 HOH HOH . E 5 HOH A 59 2159 2159 HOH HOH . E 5 HOH A 60 2160 2160 HOH HOH . E 5 HOH A 61 2161 2161 HOH HOH . E 5 HOH A 62 2162 2162 HOH HOH . E 5 HOH A 63 2163 2163 HOH HOH . E 5 HOH A 64 2164 2164 HOH HOH . E 5 HOH A 65 2165 2165 HOH HOH . E 5 HOH A 66 2166 2166 HOH HOH . E 5 HOH A 67 2167 2167 HOH HOH . E 5 HOH A 68 2168 2168 HOH HOH . E 5 HOH A 69 2169 2169 HOH HOH . E 5 HOH A 70 2170 2170 HOH HOH . E 5 HOH A 71 2171 2171 HOH HOH . E 5 HOH A 72 2172 2172 HOH HOH . E 5 HOH A 73 2173 2173 HOH HOH . E 5 HOH A 74 2174 2174 HOH HOH . E 5 HOH A 75 2175 2175 HOH HOH . E 5 HOH A 76 2176 2176 HOH HOH . E 5 HOH A 77 2177 2177 HOH HOH . E 5 HOH A 78 2178 2178 HOH HOH . E 5 HOH A 79 2179 2179 HOH HOH . E 5 HOH A 80 2180 2180 HOH HOH . E 5 HOH A 81 2181 2181 HOH HOH . E 5 HOH A 82 2182 2182 HOH HOH . F 5 HOH B 1 401 401 HOH HOH . F 5 HOH B 2 402 402 HOH HOH . F 5 HOH B 3 403 403 HOH HOH . F 5 HOH B 4 404 404 HOH HOH . F 5 HOH B 5 405 405 HOH HOH . F 5 HOH B 6 406 406 HOH HOH . F 5 HOH B 7 407 407 HOH HOH . F 5 HOH B 8 408 408 HOH HOH . F 5 HOH B 9 409 409 HOH HOH . F 5 HOH B 10 410 410 HOH HOH . F 5 HOH B 11 411 411 HOH HOH . F 5 HOH B 12 412 412 HOH HOH . F 5 HOH B 13 413 413 HOH HOH . F 5 HOH B 14 414 414 HOH HOH . F 5 HOH B 15 415 415 HOH HOH . F 5 HOH B 16 416 416 HOH HOH . F 5 HOH B 17 417 417 HOH HOH . F 5 HOH B 18 418 418 HOH HOH . F 5 HOH B 19 419 419 HOH HOH . F 5 HOH B 20 420 420 HOH HOH . F 5 HOH B 21 421 421 HOH HOH . F 5 HOH B 22 422 422 HOH HOH . F 5 HOH B 23 423 423 HOH HOH . F 5 HOH B 24 424 424 HOH HOH . F 5 HOH B 25 425 425 HOH HOH . F 5 HOH B 26 426 426 HOH HOH . F 5 HOH B 27 427 427 HOH HOH . F 5 HOH B 28 428 428 HOH HOH . F 5 HOH B 29 429 429 HOH HOH . F 5 HOH B 30 430 430 HOH HOH . F 5 HOH B 31 431 431 HOH HOH . F 5 HOH B 32 432 432 HOH HOH . F 5 HOH B 33 433 433 HOH HOH . F 5 HOH B 34 434 434 HOH HOH . F 5 HOH B 35 435 435 HOH HOH . F 5 HOH B 36 436 436 HOH HOH . F 5 HOH B 37 437 437 HOH HOH . F 5 HOH B 38 438 438 HOH HOH . F 5 HOH B 39 439 439 HOH HOH . F 5 HOH B 40 440 440 HOH HOH . F 5 HOH B 41 441 441 HOH HOH . F 5 HOH B 42 442 442 HOH HOH . F 5 HOH B 43 443 443 HOH HOH . F 5 HOH B 44 444 444 HOH HOH . F 5 HOH B 45 445 445 HOH HOH . F 5 HOH B 46 446 446 HOH HOH . F 5 HOH B 47 447 447 HOH HOH . F 5 HOH B 48 448 448 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . C 3 28.762 2.925 29.834 1 28.84 ? N1A COA 2001 A 1 HETATM 2 C C2A COA . . . C 3 29.106 3.684 30.882 1 31.41 ? C2A COA 2001 A 1 HETATM 3 N N3A COA . . . C 3 29.204 5.008 30.965 1 29.44 ? N3A COA 2001 A 1 HETATM 4 C C4A COA . . . C 3 28.901 5.58 29.79 1 29.5 ? C4A COA 2001 A 1 HETATM 5 C C5A COA . . . C 3 28.543 4.94 28.624 1 32.53 ? C5A COA 2001 A 1 HETATM 6 C C6A COA . . . C 3 28.481 3.534 28.658 1 27.24 ? C6A COA 2001 A 1 HETATM 7 N N6A COA . . . C 3 28.127 2.784 27.621 1 30.19 ? N6A COA 2001 A 1 HETATM 8 N N7A COA . . . C 3 28.31 5.872 27.618 1 26.68 ? N7A COA 2001 A 1 HETATM 9 C C8A COA . . . C 3 28.527 7.033 28.187 1 30.69 ? C8A COA 2001 A 1 HETATM 10 N N9A COA . . . C 3 28.892 6.916 29.504 1 28.47 ? N9A COA 2001 A 1 HETATM 11 C C1B COA . . . C 3 29.155 7.979 30.452 1 31.33 ? C1B COA 2001 A 1 HETATM 12 C C2B COA . . . C 3 29.668 9.314 29.929 1 29.74 ? C2B COA 2001 A 1 HETATM 13 O O2B COA . . . C 3 30.99 9.295 29.443 1 31.24 ? O2B COA 2001 A 1 HETATM 14 C C3B COA . . . C 3 29.451 10.19 31.176 1 32.43 ? C3B COA 2001 A 1 HETATM 15 O O3B COA . . . C 3 30.616 10.132 32.006 1 35.27 ? O3B COA 2001 A 1 HETATM 16 P P3B COA . . . C 3 31.745 11.268 31.726 1 34.24 ? P3B COA 2001 A 1 HETATM 17 O O7A COA . . . C 3 32.714 11.196 32.885 1 33.36 ? O7A COA 2001 A 1 HETATM 18 O O8A COA . . . C 3 32.417 10.914 30.404 1 31.93 ? O8A COA 2001 A 1 HETATM 19 O O9A COA . . . C 3 31.017 12.604 31.673 1 35.88 ? O9A COA 2001 A 1 HETATM 20 C C4B COA . . . C 3 28.283 9.484 31.894 1 34.8 ? C4B COA 2001 A 1 HETATM 21 O O4B COA . . . C 3 27.936 8.367 31.041 1 28.51 ? O4B COA 2001 A 1 HETATM 22 C C5B COA . . . C 3 27.068 10.302 32.272 1 26.99 ? C5B COA 2001 A 1 HETATM 23 O O5B COA . . . C 3 26.964 11.415 31.368 1 30.52 ? O5B COA 2001 A 1 HETATM 24 P P1A COA . . . C 3 26.59 12.887 31.893 1 30.72 ? P1A COA 2001 A 1 HETATM 25 O O1A COA . . . C 3 26.75 13.86 30.767 1 33.66 ? O1A COA 2001 A 1 HETATM 26 O O2A COA . . . C 3 27.277 13.158 33.182 1 35.34 ? O2A COA 2001 A 1 HETATM 27 O O3A COA . . . C 3 25.022 12.707 32.13 1 38.22 ? O3A COA 2001 A 1 HETATM 28 P P2A COA . . . C 3 24.048 12.943 33.367 1 40.62 ? P2A COA 2001 A 1 HETATM 29 O O4A COA . . . C 3 24.487 12.079 34.507 1 33.27 ? O4A COA 2001 A 1 HETATM 30 O O5A COA . . . C 3 23.816 14.399 33.573 1 31.07 ? O5A COA 2001 A 1 HETATM 31 O O6A COA . . . C 3 22.681 12.378 32.76 1 38.03 ? O6A COA 2001 A 1 HETATM 32 C CBP COA . . . C 3 21.207 10.516 32.542 1 32.52 ? CBP COA 2001 A 1 HETATM 33 C CCP COA . . . C 3 22.617 11.023 32.273 1 31.35 ? CCP COA 2001 A 1 HETATM 34 C CDP COA . . . C 3 21.115 9.058 32.088 1 28.29 ? CDP COA 2001 A 1 HETATM 35 C CEP COA . . . C 3 20.926 10.589 34.043 1 31.15 ? CEP COA 2001 A 1 HETATM 36 C CAP COA . . . C 3 20.16 11.357 31.807 1 31.19 ? CAP COA 2001 A 1 HETATM 37 O OAP COA . . . C 3 20.289 11.144 30.415 1 29.89 ? OAP COA 2001 A 1 HETATM 38 C C9P COA . . . C 3 18.748 11.019 32.263 1 37.87 ? C9P COA 2001 A 1 HETATM 39 O O9P COA . . . C 3 18.238 9.941 31.938 1 30.01 ? O9P COA 2001 A 1 HETATM 40 N N8P COA . . . C 3 18.127 11.942 32.994 1 31.85 ? N8P COA 2001 A 1 HETATM 41 C C7P COA . . . C 3 17.225 11.653 34.103 1 30.84 ? C7P COA 2001 A 1 HETATM 42 C C6P COA . . . C 3 16.004 10.869 33.685 1 40.66 ? C6P COA 2001 A 1 HETATM 43 C C5P COA . . . C 3 15.178 10.403 34.865 1 38.34 ? C5P COA 2001 A 1 HETATM 44 O O5P COA . . . C 3 14.885 11.188 35.759 1 42.93 ? O5P COA 2001 A 1 HETATM 45 N N4P COA . . . C 3 14.749 9.135 34.88 1 34.38 ? N4P COA 2001 A 1 HETATM 46 C C3P COA . . . C 3 14.18 8.525 36.077 1 37.02 ? C3P COA 2001 A 1 HETATM 47 C C2P COA . . . C 3 12.742 8.097 35.913 1 36.27 ? C2P COA 2001 A 1 HETATM 48 S S1P COA . . . C 3 11.911 7.892 37.512 1 38.41 ? S1P COA 2001 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #