data_8Z2K # _model_server_result.job_id AofEQ2e_x93arc8h5qf2HQ _model_server_result.datetime_utc '2024-11-29 10:46:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8Z2K # _exptl.entry_id 8Z2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8Z2K _cell.length_a 84.39 _cell.length_b 84.39 _cell.length_c 64.78 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall 'P 3' _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 206 A CYS 250 1_555 A SG CYS 252 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 243 A CYS 287 1_555 A SG CYS 258 A CYS 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 206 B CYS 250 1_555 B SG CYS 252 B CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 243 B CYS 287 1_555 B SG CYS 258 B CYS 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O SER 32 A SER 76 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc2 A O ALA 34 A ALA 78 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc3 A O PHE 37 A PHE 81 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8Z2K _atom_sites.fract_transf_matrix[1][1] 0.01185 _atom_sites.fract_transf_matrix[1][2] 0.006841 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1L0O A 1 401 1 A1L0O LIG . D 3 CA A 1 402 1 CA CA . E 2 A1L0O B 1 401 2 A1L0O LIG . F 4 HOH A 1 501 99 HOH HOH . F 4 HOH A 2 502 41 HOH HOH . F 4 HOH A 3 503 76 HOH HOH . F 4 HOH A 4 504 20 HOH HOH . F 4 HOH A 5 505 60 HOH HOH . F 4 HOH A 6 506 72 HOH HOH . F 4 HOH A 7 507 12 HOH HOH . F 4 HOH A 8 508 11 HOH HOH . F 4 HOH A 9 509 74 HOH HOH . F 4 HOH A 10 510 24 HOH HOH . F 4 HOH A 11 511 88 HOH HOH . F 4 HOH A 12 512 40 HOH HOH . F 4 HOH A 13 513 48 HOH HOH . F 4 HOH A 14 514 10 HOH HOH . F 4 HOH A 15 515 45 HOH HOH . F 4 HOH A 16 516 89 HOH HOH . F 4 HOH A 17 517 52 HOH HOH . F 4 HOH A 18 518 79 HOH HOH . F 4 HOH A 19 519 66 HOH HOH . F 4 HOH A 20 520 29 HOH HOH . F 4 HOH A 21 521 67 HOH HOH . F 4 HOH A 22 522 71 HOH HOH . F 4 HOH A 23 523 25 HOH HOH . F 4 HOH A 24 524 49 HOH HOH . F 4 HOH A 25 525 43 HOH HOH . F 4 HOH A 26 526 35 HOH HOH . F 4 HOH A 27 527 103 HOH HOH . F 4 HOH A 28 528 54 HOH HOH . F 4 HOH A 29 529 77 HOH HOH . F 4 HOH A 30 530 30 HOH HOH . F 4 HOH A 31 531 104 HOH HOH . F 4 HOH A 32 532 94 HOH HOH . F 4 HOH A 33 533 98 HOH HOH . G 4 HOH B 1 501 92 HOH HOH . G 4 HOH B 2 502 31 HOH HOH . G 4 HOH B 3 503 38 HOH HOH . G 4 HOH B 4 504 61 HOH HOH . G 4 HOH B 5 505 68 HOH HOH . G 4 HOH B 6 506 37 HOH HOH . G 4 HOH B 7 507 22 HOH HOH . G 4 HOH B 8 508 18 HOH HOH . G 4 HOH B 9 509 13 HOH HOH . G 4 HOH B 10 510 42 HOH HOH . G 4 HOH B 11 511 87 HOH HOH . G 4 HOH B 12 512 57 HOH HOH . G 4 HOH B 13 513 55 HOH HOH . G 4 HOH B 14 514 21 HOH HOH . G 4 HOH B 15 515 63 HOH HOH . G 4 HOH B 16 516 23 HOH HOH . G 4 HOH B 17 517 44 HOH HOH . G 4 HOH B 18 518 53 HOH HOH . G 4 HOH B 19 519 84 HOH HOH . G 4 HOH B 20 520 73 HOH HOH . G 4 HOH B 21 521 85 HOH HOH . G 4 HOH B 22 522 58 HOH HOH . G 4 HOH B 23 523 16 HOH HOH . G 4 HOH B 24 524 101 HOH HOH . G 4 HOH B 25 525 4 HOH HOH . G 4 HOH B 26 526 75 HOH HOH . G 4 HOH B 27 527 6 HOH HOH . G 4 HOH B 28 528 50 HOH HOH . G 4 HOH B 29 529 93 HOH HOH . G 4 HOH B 30 530 36 HOH HOH . G 4 HOH B 31 531 2 HOH HOH . G 4 HOH B 32 532 15 HOH HOH . G 4 HOH B 33 533 47 HOH HOH . G 4 HOH B 34 534 7 HOH HOH . G 4 HOH B 35 535 59 HOH HOH . G 4 HOH B 36 536 82 HOH HOH . G 4 HOH B 37 537 9 HOH HOH . G 4 HOH B 38 538 56 HOH HOH . G 4 HOH B 39 539 62 HOH HOH . G 4 HOH B 40 540 19 HOH HOH . G 4 HOH B 41 541 32 HOH HOH . G 4 HOH B 42 542 39 HOH HOH . G 4 HOH B 43 543 70 HOH HOH . G 4 HOH B 44 544 78 HOH HOH . G 4 HOH B 45 545 8 HOH HOH . G 4 HOH B 46 546 102 HOH HOH . G 4 HOH B 47 547 81 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 88.169 _atom_site.Cartn_y 38.12 _atom_site.Cartn_z 2.991 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #