data_8Z2N # _model_server_result.job_id zI03ejDOA3takfMIZOElYg _model_server_result.datetime_utc '2025-04-10 16:24:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8z2n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 8Z2N # _exptl.entry_id 8Z2N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Z2N _cell.length_a 57.787 _cell.length_b 92.032 _cell.length_c 167.644 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Z2N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 243 B GLU 243 1_555 F CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc2 A OG1 THR 244 B THR 244 1_555 F CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc3 F CA CA . B CA 302 1_555 L O HOH . B HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc4 F CA CA . B CA 302 1_555 B O4 DT 1 C DT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc5 F CA CA . B CA 302 1_555 M O HOH . C HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc6 F CA CA . B CA 302 1_555 M O HOH . C HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc7 C O4 DT 1 D DT 1 1_555 J CA CA . CA00 CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc8 D OE1 GLU 243 CA00 GLU 243 1_555 J CA CA . CA00 CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc9 D OG1 THR 244 CA00 THR 244 1_555 J CA CA . CA00 CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc10 J CA CA . CA00 CA 302 1_555 N O HOH . CA00 HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc11 J CA CA . CA00 CA 302 1_555 N O HOH . CA00 HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc12 J CA CA . CA00 CA 302 1_555 N O HOH . CA00 HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? hydrog WATSON-CRICK hydrog1 B N1 DA 2 C DA 2 1_555 C N3 DT 12 D DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N6 DA 2 C DA 2 1_555 C O4 DT 12 D DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N1 DG 3 C DG 3 1_555 C N3 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N2 DG 3 C DG 3 1_555 C O2 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B O6 DG 3 C DG 3 1_555 C N4 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N3 DT 4 C DT 4 1_555 C N1 DA 10 D DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B O4 DT 4 C DT 4 1_555 C N6 DA 10 D DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N3 DC 5 C DC 5 1_555 C N1 DG 9 D DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N4 DC 5 C DC 5 1_555 C O6 DG 9 D DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B O2 DC 5 C DC 5 1_555 C N2 DG 9 D DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N1 DG 6 C DG 6 1_555 C N3 DC 8 D DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N2 DG 6 C DG 6 1_555 C O2 DC 8 D DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B O6 DG 6 C DG 6 1_555 C N4 DC 8 D DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N3 DT 7 C DT 7 1_555 C N1 DA 7 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O4 DT 7 C DT 7 1_555 C N6 DA 7 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N3 DC 8 C DC 8 1_555 C N1 DG 6 D DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N4 DC 8 C DC 8 1_555 C O6 DG 6 D DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B O2 DC 8 C DC 8 1_555 C N2 DG 6 D DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N1 DG 9 C DG 9 1_555 C N3 DC 5 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N2 DG 9 C DG 9 1_555 C O2 DC 5 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B O6 DG 9 C DG 9 1_555 C N4 DC 5 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N1 DA 10 C DA 10 1_555 C N3 DT 4 D DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N6 DA 10 C DA 10 1_555 C O4 DT 4 D DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B N3 DC 11 C DC 11 1_555 C N1 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B N4 DC 11 C DC 11 1_555 C O6 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B O2 DC 11 C DC 11 1_555 C N2 DG 3 D DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B N3 DT 12 C DT 12 1_555 C N1 DA 2 D DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B O4 DT 12 C DT 12 1_555 C N6 DA 2 D DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8Z2N _atom_sites.fract_transf_matrix[1][1] 0.017305 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010866 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 SO4 B 1 301 1 SO4 SO4 . F 5 CA B 1 302 2 CA CA . G 6 GOL C 1 101 101 GOL GOL . H 7 GLY C 1 102 302 GLY GLY . I 4 SO4 CA00 1 301 2 SO4 SO4 . J 5 CA CA00 1 302 1 CA CA . K 7 GLY CA00 1 303 301 GLY GLY . L 8 HOH B 1 401 57 HOH HOH . L 8 HOH B 2 402 60 HOH HOH . L 8 HOH B 3 403 58 HOH HOH . L 8 HOH B 4 404 71 HOH HOH . L 8 HOH B 5 405 10 HOH HOH . L 8 HOH B 6 406 27 HOH HOH . L 8 HOH B 7 407 70 HOH HOH . L 8 HOH B 8 408 4 HOH HOH . L 8 HOH B 9 409 66 HOH HOH . L 8 HOH B 10 410 3 HOH HOH . L 8 HOH B 11 411 6 HOH HOH . L 8 HOH B 12 412 20 HOH HOH . L 8 HOH B 13 413 5 HOH HOH . L 8 HOH B 14 414 65 HOH HOH . L 8 HOH B 15 415 22 HOH HOH . L 8 HOH B 16 416 38 HOH HOH . L 8 HOH B 17 417 16 HOH HOH . L 8 HOH B 18 418 61 HOH HOH . L 8 HOH B 19 419 36 HOH HOH . M 8 HOH C 1 201 68 HOH HOH . M 8 HOH C 2 202 67 HOH HOH . M 8 HOH C 3 203 15 HOH HOH . N 8 HOH CA00 1 401 74 HOH HOH . N 8 HOH CA00 2 402 8 HOH HOH . N 8 HOH CA00 3 403 13 HOH HOH . N 8 HOH CA00 4 404 7 HOH HOH . N 8 HOH CA00 5 405 63 HOH HOH . N 8 HOH CA00 6 406 64 HOH HOH . N 8 HOH CA00 7 407 1 HOH HOH . N 8 HOH CA00 8 408 55 HOH HOH . N 8 HOH CA00 9 409 56 HOH HOH . N 8 HOH CA00 10 410 14 HOH HOH . N 8 HOH CA00 11 411 72 HOH HOH . N 8 HOH CA00 12 412 21 HOH HOH . N 8 HOH CA00 13 413 73 HOH HOH . N 8 HOH CA00 14 414 12 HOH HOH . N 8 HOH CA00 15 415 69 HOH HOH . N 8 HOH CA00 16 416 59 HOH HOH . N 8 HOH CA00 17 417 11 HOH HOH . N 8 HOH CA00 18 418 2 HOH HOH . N 8 HOH CA00 19 419 19 HOH HOH . N 8 HOH CA00 20 420 62 HOH HOH . N 8 HOH CA00 21 421 17 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x 36.75 _atom_site.Cartn_y -1.141 _atom_site.Cartn_z 26.905 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #